RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 C9orf172C9J069 976 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 WNT9BO14905 357 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 NDUFB8O95169 186 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 SELENOTP62341 195 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 EDDM3AQ14507 147 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 C1orf210Q8IVY1 113 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 FAM103A1Q9BTL3 118 aaKnown RBP13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 ROS1P08922 2347 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 KIR2DL5BA0A0G2JN68 375 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 KIR2DL5BA0A0G2JPC4 375 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 FFAR4Q5NUL3 377 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 KIR2DL5AQ8N109 375 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 OR10G4Q8NGN3 311 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 OR10G9Q8NGN4 311 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 OR10G7Q8NGN6 311 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 SDF2L1Q9HCN8 221 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 LOC105371242A0A075B767 164 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 HOXC12P31275 282 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 FABP6P51161 128 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 KLF3P57682 345 aaPredicted RBP13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 LINC00205P59089 165 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 TGFBR3Q03167 851 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 ATP1A1-AS1Q5TC04 95 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 H2BFWTQ7Z2G1 175 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 HAPLN4Q86UW8 402 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 ZNF295-AS1Q8N0V1 137 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 PKIBQ9C010 78 aa13.9□□□□□ -0.18
CDC42EP4-201ENST00000335793 CDKN1AP38936 164 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 CATR1Q13166 79 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 BSXQ3C1V8 233 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 MOB1BQ7L9L4 216 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 C16orf82Q7Z2V1 217 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 RPP25LQ8N5L8 163 aaKnown RBP13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 HAND1O96004 215 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 UBE2G2P60604 165 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 MEF2BQ02080 365 aaPredicted RBP13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 Q6P435 159 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 ZDHHC16Q969W1 377 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 RNF2Q99496 336 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 KLF13Q9Y2Y9 288 aaPredicted RBP13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 ZG16O60844 167 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 OPN1MWP04001 364 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 SP1P08047 785 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 OPN1MW2P0DN77 364 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 OPN1MW3P0DN78 364 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 FAM3BP58499 235 aaPredicted RBP13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 GATAD1Q8WUU5 269 aa13.89□□□□□ -0.19
CDC42EP4-201ENST00000335793 TRGV5A0A0B4J1U4 118 aa13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 HEATR1Q9H583 2144 aaKnown RBP13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 MUC6Q6W4X9 2439 aa13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 KIAA1324LA8MWY0 1029 aaPredicted RBP13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 S1PR2O95136 353 aa13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 DHRS13Q6UX07 377 aa13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 BTF3L4Q96K17 158 aa13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 PSMG3Q9BT73 122 aaPredicted RBP13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 NAT8Q9UHE5 227 aa13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 CHTOPQ9Y3Y2 248 aaKnown RBP13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 A0A0U1RQK1 487 aa13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 PAGE4O60829 102 aa13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 AGFG2O95081 481 aa13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 SLC25A6P12236 298 aa13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 RPL19P84098 196 aaKnown RBP13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 Q6ZN92 141 aa13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 ZNF497Q6ZNH5 498 aa13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 Q8IYB0 196 aa13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 NCOR1P1Q9H4R4 102 aa13.88□□□□□ -0.19
CDC42EP4-201ENST00000335793 TRAV1-1A0A0B4J248 108 aa13.87□□□□□ -0.19
CDC42EP4-201ENST00000335793 TMEM30CPA0ZSE6 113 aa13.87□□□□□ -0.19
CDC42EP4-201ENST00000335793 HSBP1L1C9JCN9 74 aa13.87□□□□□ -0.19
CDC42EP4-201ENST00000335793 PSPNO60542 156 aa13.87□□□□□ -0.19
CDC42EP4-201ENST00000335793 EGR1P18146 543 aa13.87□□□□□ -0.19
CDC42EP4-201ENST00000335793 GALR1P47211 349 aa13.87□□□□□ -0.19
CDC42EP4-201ENST00000335793 WDR86Q86TI4 376 aa13.87□□□□□ -0.19
CDC42EP4-201ENST00000335793 MBD3L1Q8WWY6 194 aa13.87□□□□□ -0.19
CDC42EP4-201ENST00000335793 WDYHV1Q96HA8 205 aa13.87□□□□□ -0.19
CDC42EP4-201ENST00000335793 SRD5A3Q9H8P0 318 aa13.87□□□□□ -0.19
CDC42EP4-201ENST00000335793 PSG11Q9UQ72 335 aa13.87□□□□□ -0.19
CDC42EP4-201ENST00000335793 F6UZH7 168 aa13.87□□□□□ -0.19
CDC42EP4-201ENST00000335793 MPLP40238 635 aa13.87□□□□□ -0.19
CDC42EP4-201ENST00000335793 RPL30P62888 115 aaKnown RBP13.87□□□□□ -0.19
CDC42EP4-201ENST00000335793 ODAMA1E959 279 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 TIMM8AO60220 97 aaPredicted RBP13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 IGKV1D-33P01593 117 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 IGKV1-33P01594 117 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 IGLV2-14P01704 120 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 HBZP02008 142 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 COX5AP20674 150 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 CHRNA7P36544 502 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 PRAMEF6Q5VXH4 476 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 ZNF596Q8TC21 504 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 BCL2L2Q92843 193 aaPredicted RBP13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 C17orf98A8MV24 154 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 C12orf77C9JDV5 145 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 TNFSF15O95150 251 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 CRYAAP02489 173 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 TDGF1P13385 188 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 CCKARP32238 428 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 UBE2V1Q13404 147 aa13.86□□□□□ -0.19
CDC42EP4-201ENST00000335793 ACSM6Q6P461 480 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms