RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 Q6ZS92 163 aa14.65□□□□□ -0.06
LRCH3-201ENST00000334859 CYP2G1PQ6ZSU1 146 aa14.65□□□□□ -0.06
LRCH3-201ENST00000334859 ZNF251Q9BRH9 671 aa14.65□□□□□ -0.06
LRCH3-201ENST00000334859 TMEM140Q9NV12 185 aa14.65□□□□□ -0.06
LRCH3-201ENST00000334859 FAM90A9PA6NNJ1 464 aa14.64□□□□□ -0.07
LRCH3-201ENST00000334859 RBFOX2O43251 390 aaKnown RBP eCLIP14.64□□□□□ -0.072e-11■■■■□ 23
LRCH3-201ENST00000334859 KBTBD11O94819 623 aa14.64□□□□□ -0.07
LRCH3-201ENST00000334859 LHBP01229 141 aa14.64□□□□□ -0.07
LRCH3-201ENST00000334859 RND2P52198 227 aa14.64□□□□□ -0.07
LRCH3-201ENST00000334859 TMEM241Q24JQ0 296 aa14.64□□□□□ -0.07
LRCH3-201ENST00000334859 CR1LQ2VPA4 569 aa14.64□□□□□ -0.07
LRCH3-201ENST00000334859 ACOT6Q3I5F7 207 aaPredicted RBP14.64□□□□□ -0.07
LRCH3-201ENST00000334859 DUX4L9Q6RFH8 374 aaPredicted RBP14.64□□□□□ -0.07
LRCH3-201ENST00000334859 DEFB108BQ8NET1 73 aa14.64□□□□□ -0.07
LRCH3-201ENST00000334859 FAM216AQ8WUB2 273 aa14.64□□□□□ -0.07
LRCH3-201ENST00000334859 DOK5Q9P104 306 aa14.64□□□□□ -0.07
LRCH3-201ENST00000334859 ANKRD11Q6UB99 2663 aaPredicted RBP14.64□□□□□ -0.07
LRCH3-201ENST00000334859 DSCAMO60469 2012 aa14.64□□□□□ -0.07
LRCH3-201ENST00000334859 IGLV3-9A0A075B6K5 115 aa14.64□□□□□ -0.07
LRCH3-201ENST00000334859 TRAV3A0A0B4J244 114 aa14.64□□□□□ -0.07
LRCH3-201ENST00000334859 SELENOVP59797 346 aa14.64□□□□□ -0.07
LRCH3-201ENST00000334859 RPP30P78346 268 aaKnown RBP14.64□□□□□ -0.07
LRCH3-201ENST00000334859 GCSAMLQ5JQS6 135 aa14.64□□□□□ -0.07
LRCH3-201ENST00000334859 WDR83OSQ9Y284 106 aa14.64□□□□□ -0.07
LRCH3-201ENST00000334859 TMEM250H0YL14 139 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 K7EM74 188 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 HIST1H2BKO60814 126 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 PAGE4O60829 102 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 HIST1H2BJP06899 126 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 MDKP21741 143 aaPredicted RBP14.63□□□□□ -0.07
LRCH3-201ENST00000334859 BMP5P22003 454 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 HIST1H2BOP23527 126 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 HIST1H2BBP33778 126 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 HIST1H2BDP58876 126 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 HIST1H2BCP62807 126 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 TNFAIP6P98066 277 aaPredicted RBP14.63□□□□□ -0.07
LRCH3-201ENST00000334859 HIST2H2BEQ16778 126 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 AARDQ4LEZ3 155 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.63□□□□□ -0.07
LRCH3-201ENST00000334859 OR4S2Q8NH73 311 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 HIST1H2BHQ93079 126 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 HIST1H2BNQ99877 126 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 HIST1H2BMQ99879 126 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 PARLQ9H300 379 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 RNF7Q9UBF6 113 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 OPN1MWP04001 364 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 OPN1MW2P0DN77 364 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 OPN1MW3P0DN78 364 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 RAB7AP51149 207 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 FAM27E3Q08E93 113 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 SFXN3Q9BWM7 321 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 CTDSP1Q9GZU7 261 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 GCM1Q9NP62 436 aa14.63□□□□□ -0.07
LRCH3-201ENST00000334859 SAA2-SAA4A0A096LPE2 208 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 TRGV10A0A0A0MS01 117 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 TRAV38-1A0A0B4J264 116 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 RRHO14718 337 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 LY86O95711 162 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 SAA2P0DJI9 122 aaPredicted RBP14.62□□□□□ -0.07
LRCH3-201ENST00000334859 HOXA5P20719 270 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 TIMP3P35625 211 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 KIR2DS2P43631 304 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 RELBQ01201 579 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 C17orf58Q2M2W7 97 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 BSXQ3C1V8 233 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 C1orf229Q6ZS94 237 aaPredicted RBP14.62□□□□□ -0.07
LRCH3-201ENST00000334859 GFOD1Q9NXC2 390 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 GVINP1Q7Z2Y8 2422 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 CRYABP02511 175 aaKnown RBP14.62□□□□□ -0.07
LRCH3-201ENST00000334859 C3orf36Q3SXR2 165 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 CT45A1Q5HYN5 189 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 C16orf82Q7Z2V1 217 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 Q8N7P7 452 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 RBMXL3Q8N7X1 1067 aaKnown RBP14.62□□□□□ -0.07
LRCH3-201ENST00000334859 OR13D1Q8NGV5 346 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 CT45A3Q8NHU0 189 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 RAB9BQ9NP90 201 aa14.62□□□□□ -0.07
LRCH3-201ENST00000334859 TET2Q6N021 2002 aaPredicted RBP14.61□□□□□ -0.07
LRCH3-201ENST00000334859 KBTBD11-OT1A0A1B0GTJ5 212 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 KLK10O43240 276 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 IGHV1-46P01743 117 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 GATA4P43694 442 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 SPNS3Q6ZMD2 512 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 C22orf34Q6ZV56 151 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 LYG1Q8N1E2 194 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 ABHD12Q8N2K0 398 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 NECAP1Q8NC96 275 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 OR52E5Q8NH55 327 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 TCF19Q9Y242 345 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 C11orf94C9JXX5 98 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 GFRA3O60609 400 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 VDAC2P45880 294 aaPredicted RBP14.61□□□□□ -0.07
LRCH3-201ENST00000334859 CDX1P47902 265 aaPredicted RBP14.61□□□□□ -0.07
LRCH3-201ENST00000334859 GNG10P50151 68 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 RPL23P62829 140 aaKnown RBP14.61□□□□□ -0.07
LRCH3-201ENST00000334859 C4orf17Q53FE4 359 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 DDB2Q92466 427 aa14.61□□□□□ -0.07
LRCH3-201ENST00000334859 NEIL1Q96FI4 390 aaPredicted RBP14.61□□□□□ -0.07
LRCH3-201ENST00000334859 DSCAML1Q8TD84 2053 aa14.6□□□□□ -0.07
LRCH3-201ENST00000334859 RAI1Q7Z5J4 1906 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms