RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 MPDZO75970 2070 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 HELTA6NFD8 242 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 MOSP00540 346 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 HIST1H1BP16401 226 aaKnown RBP9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 TCTEX1D1Q8N7M0 179 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 PEMTQ9UBM1 199 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 MST1P26927 711 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 NUTF2P61970 127 aaKnown RBP9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 FAM210BQ96KR6 192 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 ZGRF1Q86YA3 2104 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 CDRT15L2A8MXV6 281 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 CRXO43186 299 aaPredicted RBP9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 G0S2P27469 103 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 DEFB121Q5J5C9 76 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 Q6ZNX1 250 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 Q71RC1 249 aaPredicted RBP9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 LRP11Q86VZ4 500 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 KBTBD11-OT1A0A1B0GTJ5 212 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 CD24P25063 80 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 Q1RN00 199 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 LINC01590Q5TEZ4 76 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 IGHV3OR16-13A0A075B7E8 117 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 IGLV3-32A0A0A0MS00 114 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 IGHV3-74A0A0B4J1X5 117 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 SRD5A1P18405 259 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 C3orf56Q8N813 242 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 LINC00312Q9Y6C7 94 aa9.05□□□□□ -0.96
SYNPO2-201ENST00000307142 CCL3L1P16619 93 aa9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 ZNF430Q9H8G1 570 aaPredicted RBP9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 IGHV3-11P01762 117 aa9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 ADRB1P08588 477 aa9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 RIGQ13278 110 aa9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 ASPHD2Q6ICH7 369 aa9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 GTSCR1Q86UQ5 136 aa9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 GGNQ86UU5 652 aa9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 REPIN1Q9BWE0 567 aaKnown RBP9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 TBX6O95947 436 aaPredicted RBP9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 RAG2P55895 527 aa9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 MEF2CQ06413 473 aaPredicted RBP9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 CLEC19AQ6UXS0 136 aa9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 LDLRAD3Q86YD5 345 aa9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 ZNF586Q9NXT0 402 aa9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 MIXL1Q9H2W2 232 aa9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 FBXL7Q9UJT9 491 aa9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 YTHDF2Q9Y5A9 579 aaKnown RBP9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 TCL1AP56279 114 aa9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 HSPE1P61604 102 aaKnown RBP9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 GVINP1Q7Z2Y8 2422 aa9.04□□□□□ -0.96
SYNPO2-201ENST00000307142 ICMTO60725 284 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 PMCHP20382 165 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 UNC119Q13432 240 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 VAX1Q5SQQ9 334 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 IGHV1-46P01743 117 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 TSPOP30536 169 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 KIR2DL2P43627 348 aaPredicted RBP9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 KRTDAPP60985 99 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 BPIFA4PQ86YQ2 179 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 GPX1P07203 203 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 PTTG1IPP53801 180 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 EMP1P54849 157 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 PSG9Q00887 426 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 FAM90A1Q86YD7 464 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 Q96MF0 132 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 TRBV5-7A0A0A0MS05 114 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 MFNGO00587 321 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 DLX6P56179 175 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 VMO1Q7Z5L0 202 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 TMEM222Q9H0R3 208 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 CACNA1DQ01668 2161 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 ZNF146Q15072 292 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 GLRX5Q86SX6 157 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 B4DSR2 109 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 RNF223E7ERA6 249 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 M0QZK8 103 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 PAGE4O60829 102 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 HSBP1O75506 76 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 TFF1P04155 84 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 ZNF680Q8NEM1 530 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 V9GYH0 126 aa9.03□□□□□ -0.96
SYNPO2-201ENST00000307142 PITX3O75364 302 aa9.02□□□□□ -0.96
SYNPO2-201ENST00000307142 HTN3P15516 51 aa9.02□□□□□ -0.96
SYNPO2-201ENST00000307142 SELENOTP62341 195 aa9.02□□□□□ -0.96
SYNPO2-201ENST00000307142 CD69Q07108 199 aa9.02□□□□□ -0.96
SYNPO2-201ENST00000307142 COMMD1Q8N668 190 aa9.02□□□□□ -0.96
SYNPO2-201ENST00000307142 TOLLIPQ9H0E2 274 aa9.02□□□□□ -0.96
SYNPO2-201ENST00000307142 FCN1O00602 326 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 GPR183P32249 361 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 Q5PR19 223 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 AMMECR1LQ6DCA0 310 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 SELENOHQ8IZQ5 122 aaKnown RBP9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 OR13A1Q8NGR1 328 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 SRD5A3Q9H8P0 318 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 RBFOX3A6NFN3 312 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 ADAM11O75078 769 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 SCO1O75880 301 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 CSN3P07498 182 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 ZNF818PQ6ZRF7 136 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 LINC01356Q8N9X3 169 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 TMEM116Q8NCL8 245 aa9.02□□□□□ -0.97
SYNPO2-201ENST00000307142 NEURL2Q9BR09 285 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms