RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 GGTLC1Q9BX51 225 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 C20orf141Q9NUB4 165 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 TRAV38-1A0A0B4J264 116 aa4.21□□□□□ -1.73
CSMD3-201ENST00000297405 NDUFB4O95168 129 aa4.21□□□□□ -1.73
CSMD3-201ENST00000297405 CRPP02741 224 aa4.21□□□□□ -1.73
CSMD3-201ENST00000297405 CXCL2P19875 107 aa4.21□□□□□ -1.73
CSMD3-201ENST00000297405 PPP1R27Q86WC6 154 aa4.21□□□□□ -1.73
CSMD3-201ENST00000297405 OR4A5Q8NH83 315 aa4.21□□□□□ -1.73
CSMD3-201ENST00000297405 LTB4R2Q9NPC1 389 aa4.21□□□□□ -1.73
CSMD3-201ENST00000297405 OSTCQ9NRP0 149 aa4.21□□□□□ -1.73
CSMD3-201ENST00000297405 CRYBB3P26998 211 aa4.21□□□□□ -1.73
CSMD3-201ENST00000297405 NEU1Q99519 415 aa4.21□□□□□ -1.73
CSMD3-201ENST00000297405 C5AR2Q9P296 337 aa4.21□□□□□ -1.73
CSMD3-201ENST00000297405 KCNE1BA0A087WTH5 132 aa4.21□□□□□ -1.73
CSMD3-201ENST00000297405 TMEM50BP56557 158 aa4.21□□□□□ -1.73
CSMD3-201ENST00000297405 FOXL2P58012 376 aa4.21□□□□□ -1.73
CSMD3-201ENST00000297405 TBR1Q16650 682 aa4.21□□□□□ -1.73
CSMD3-201ENST00000297405 Q6ZPB1 254 aaPredicted RBP4.21□□□□□ -1.73
CSMD3-201ENST00000297405 A0A1W2PR48 441 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 B4GALT3O60512 393 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 MPZP25189 248 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 CNTFRP26992 372 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 FGF8P55075 233 aaPredicted RBP4.21□□□□□ -1.74
CSMD3-201ENST00000297405 RND3P61587 244 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 TEX37Q96LM6 180 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 NRN1Q9NPD7 142 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 IGHV2-70P01814 119 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 IZUMO1RA6ND01 250 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 UBE2L6O14933 153 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 AGBL5Q8NDL9 886 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 ERRFI1Q9UJM3 462 aaPredicted RBP4.21□□□□□ -1.74
CSMD3-201ENST00000297405 HIGD1AQ9Y241 93 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 A0A1W2PRU2 124 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 J3QW42 95 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 RNF224P0DH78 156 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 HOXB3P14651 431 aaPredicted RBP4.21□□□□□ -1.74
CSMD3-201ENST00000297405 MFAP4P55083 255 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 DUSP2Q05923 314 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 AMER3Q8N944 861 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 C17orf47Q8NEP4 570 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 SCAMP4Q969E2 229 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 ATOX1O00244 68 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 SIVA1O15304 175 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 LPAR6P43657 344 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 CD300CQ08708 224 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 C2orf27AQ580R0 203 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 FBXL14Q8N1E6 418 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 METTL26Q96S19 204 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 NPFFR1Q9GZQ6 430 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 PLAGL1Q9UM63 463 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 F8VVB4 439 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 F8VWA3 439 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 RAMP3O60896 148 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 CACNG7P62955 275 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 C5orf47Q569G3 176 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 HIST3H2BBQ8N257 126 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 MSL2Q9HCI7 577 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 A0A1W2PQU0 124 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 LDB3O75112 727 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 VEGFAP15692 232 aaPredicted RBP4.21□□□□□ -1.74
CSMD3-201ENST00000297405 DLX6P56179 175 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 RAE1P78406 368 aaKnown RBP4.21□□□□□ -1.74
CSMD3-201ENST00000297405 MRAPQ8TCY5 172 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 ABHD17AQ96GS6 310 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 PRSS38A1L453 326 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 C9JCJ5 164 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 UPK2O00526 184 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 CSN3P07498 182 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 ZNF77Q15935 545 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 TMEM144Q7Z5S9 345 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 C16orf92Q96LL3 132 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 EDA2RQ9HAV5 297 aa4.21□□□□□ -1.74
CSMD3-201ENST00000297405 CD5P06127 495 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 C8orf88P0DMB2 117 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 PAX1P15863 534 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 DCAF12Q5T6F0 453 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 CRYGNQ8WXF5 182 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 ZNF714Q96N38 554 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 SHANK3Q9BYB0 1731 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 PVRP15151 417 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 C1orf220Q5T0J3 134 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 PGLYRP3Q96LB9 341 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 SLX1AQ9BQ83 275 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 IGKV6-21A0A0C4DH24 114 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 MALP21145 153 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 FAAP20Q6NZ36 180 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 MEX3DQ86XN8 651 aaKnown RBP4.2□□□□□ -1.74
CSMD3-201ENST00000297405 CNEP1R1Q8N9A8 125 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 PIGTQ969N2 578 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 OR2H1Q9GZK4 316 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 ERG28Q9UKR5 140 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 SLC25A15Q9Y619 301 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 K7ESF4 209 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 FGF17O60258 216 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 OR3A4PP47883 348 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 SRYQ05066 204 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.2□□□□□ -1.74
CSMD3-201ENST00000297405 NT5CQ8TCD5 201 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 C1orf43Q9BWL3 253 aa4.2□□□□□ -1.74
CSMD3-201ENST00000297405 GTSF1LQ9H1H1 148 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms