RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 CXCL2P19875 107 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 ANOS1P23352 680 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 STPG2Q8N412 459 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 SLC25A38Q96DW6 304 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 IGHV3-66A0A0C4DH42 116 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 ARL14EPLP0DKL9 152 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 HKR1P10072 659 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 NMUP48645 174 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 TNFSF10P50591 281 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 ZMAT5Q9UDW3 170 aaKnown RBP14.72□□□□□ -0.05
SHANK1-201ENST00000293441 F12P00748 615 aaPredicted RBP14.72□□□□□ -0.05
SHANK1-201ENST00000293441 COMPP49747 757 aaPredicted RBP14.72□□□□□ -0.05
SHANK1-201ENST00000293441 MEOX2P50222 304 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 ACP7Q6ZNF0 438 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.72□□□□□ -0.05
SHANK1-201ENST00000293441 PIN1P1O15428 100 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 VN1R17PQ8TDU5 208 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 SMIM12Q96EX1 92 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 CHRNA10Q9GZZ6 450 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 TUBA4BQ9H853 241 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 WDR90Q96KV7 1748 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 SULT1A2P50226 295 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 S4R3C0 116 aa14.72□□□□□ -0.05
SHANK1-201ENST00000293441 IGHV3OR16-13A0A075B7E8 117 aa14.71□□□□□ -0.05
SHANK1-201ENST00000293441 IGHV3-74A0A0B4J1X5 117 aa14.71□□□□□ -0.05
SHANK1-201ENST00000293441 DRAM1Q8N682 238 aa14.71□□□□□ -0.05
SHANK1-201ENST00000293441 OR51M1Q9H341 326 aa14.71□□□□□ -0.05
SHANK1-201ENST00000293441 TUBD1Q9UJT1 453 aa14.71□□□□□ -0.05
SHANK1-201ENST00000293441 IGKV3OR2-268A0A0C4DH90 116 aa14.71□□□□□ -0.05
SHANK1-201ENST00000293441 ZNF207O43670 478 aaKnown RBP14.71□□□□□ -0.05
SHANK1-201ENST00000293441 SNRPD3P62318 126 aaKnown RBP14.71□□□□□ -0.05
SHANK1-201ENST00000293441 CHAC2Q8WUX2 184 aa14.71□□□□□ -0.05
SHANK1-201ENST00000293441 NEU4Q8WWR8 484 aaPredicted RBP14.71□□□□□ -0.05
SHANK1-201ENST00000293441 SGK494Q96LW2 274 aa14.71□□□□□ -0.05
SHANK1-201ENST00000293441 IGHV1-2P23083 117 aa14.71□□□□□ -0.05
SHANK1-201ENST00000293441 TCF19Q9Y242 345 aa14.71□□□□□ -0.05
SHANK1-201ENST00000293441 ZNF236Q9UL36 1845 aa14.71□□□□□ -0.05
SHANK1-201ENST00000293441 KBTBD11O94819 623 aa14.71□□□□□ -0.05
SHANK1-201ENST00000293441 C1QL1O75973 258 aa14.71□□□□□ -0.06
SHANK1-201ENST00000293441 LINC01590Q5TEZ4 76 aa14.71□□□□□ -0.06
SHANK1-201ENST00000293441 WDR25Q64LD2 544 aaPredicted RBP14.71□□□□□ -0.06
SHANK1-201ENST00000293441 ASPHD2Q6ICH7 369 aa14.71□□□□□ -0.06
SHANK1-201ENST00000293441 MUC1P15941 1255 aaPredicted RBP14.71□□□□□ -0.06
SHANK1-201ENST00000293441 IFITM10A6NMD0 228 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 TGFBR3LH3BV60 316 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 NUDT3O95989 172 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 CD99P14209 185 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 MOSP00540 346 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 CD74P04233 296 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 ZNF146Q15072 292 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 YAE1D1Q9NRH1 226 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 IGKV1D-33P01593 117 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 IGKV1-33P01594 117 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 CDKN1AP38936 164 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 FAM74A4Q5TZK3 123 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 IGHV3-49A0A0A0MS15 119 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 IGHV2OR16-5A0A0B4J2B6 119 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 A0A1W2PRX2 142 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 TMEM30BQ3MIR4 351 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 NPIPB3Q92617 1050 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 GP6Q9HCN6 339 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 IGLV3-19P01714 112 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 OR51G1Q8NGK1 321 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 C5orf66Q9H5L9 145 aa14.7□□□□□ -0.06
SHANK1-201ENST00000293441 ZNF708P17019 499 aa14.69□□□□□ -0.06
SHANK1-201ENST00000293441 TMEM177Q53S58 311 aa14.69□□□□□ -0.06
SHANK1-201ENST00000293441 UMODP07911 640 aa14.69□□□□□ -0.06
SHANK1-201ENST00000293441 LY6DQ14210 128 aa14.69□□□□□ -0.06
SHANK1-201ENST00000293441 ZNF343Q6P1L6 599 aa14.69□□□□□ -0.06
SHANK1-201ENST00000293441 C9orf106Q8NAJ2 232 aa14.69□□□□□ -0.06
SHANK1-201ENST00000293441 ZFP30Q9Y2G7 519 aa14.69□□□□□ -0.06
SHANK1-201ENST00000293441 PAM16Q9Y3D7 125 aa14.69□□□□□ -0.06
SHANK1-201ENST00000293441 IL4P05112 153 aa14.69□□□□□ -0.06
SHANK1-201ENST00000293441 C8orf88P0DMB2 117 aa14.69□□□□□ -0.06
SHANK1-201ENST00000293441 RAB24Q969Q5 203 aa14.69□□□□□ -0.06
SHANK1-201ENST00000293441 H0YL77 283 aa14.69□□□□□ -0.06
SHANK1-201ENST00000293441 PRSS8Q16651 343 aa14.69□□□□□ -0.06
SHANK1-201ENST00000293441 LOC390937A0A1W2PQ73 354 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 FAM90A26D6RGX4 464 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 CELA3BP08861 270 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 TSPOP30536 169 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 HIST1H1AQ02539 215 aaPredicted RBP14.68□□□□□ -0.06
SHANK1-201ENST00000293441 WDYHV1Q96HA8 205 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 CHD5Q8TDI0 1954 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 TET1Q8NFU7 2136 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 SRSF12Q8WXF0 261 aaKnown RBP14.68□□□□□ -0.06
SHANK1-201ENST00000293441 C7orf69Q9H7B7 122 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 IGKV1D-43A0A0B4J1Z2 117 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 ZNF250P15622 560 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 C2orf83Q53S99 150 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 FAM216BQ8N7L0 139 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 FBXL15Q9H469 300 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 TGFAP01135 160 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 ZNF56Q15929 161 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 TRAF4Q9BUZ4 470 aaPredicted RBP14.68□□□□□ -0.06
SHANK1-201ENST00000293441 SIGIRRQ6IA17 410 aa14.68□□□□□ -0.06
SHANK1-201ENST00000293441 MDC1Q14676 2089 aaKnown RBP14.68□□□□□ -0.06
SHANK1-201ENST00000293441 TPRP12270 2363 aaKnown RBP14.68□□□□□ -0.06
SHANK1-201ENST00000293441 FAM3BP58499 235 aaPredicted RBP14.67□□□□□ -0.06
SHANK1-201ENST00000293441 UNQ9370/PRO34162Q6UXP9 181 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms