RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 WASHC3Q9Y3C0 194 aa15.24■□□□□ 0.03
PDLIM3-202ENST00000284770 FLNAP21333 2647 aaKnown RBP15.24■□□□□ 0.03
PDLIM3-202ENST00000284770 TIMM23O14925 209 aa15.24■□□□□ 0.03
PDLIM3-202ENST00000284770 C11orf87Q6NUJ2 197 aa15.24■□□□□ 0.03
PDLIM3-202ENST00000284770 NANPQ8TBE9 248 aa15.24■□□□□ 0.03
PDLIM3-202ENST00000284770 IGHV3-72A0A0B4J1Y9 119 aa15.23■□□□□ 0.03
PDLIM3-202ENST00000284770 HMSDA8MTL9 139 aa15.23■□□□□ 0.03
PDLIM3-202ENST00000284770 SLC25A4P12235 298 aa15.23■□□□□ 0.03
PDLIM3-202ENST00000284770 PAX6P26367 422 aa15.23■□□□□ 0.03
PDLIM3-202ENST00000284770 RAB32Q13637 225 aa15.23■□□□□ 0.03
PDLIM3-202ENST00000284770 SPNS3Q6ZMD2 512 aa15.23■□□□□ 0.03
PDLIM3-202ENST00000284770 FAM219AQ8IW50 185 aa15.23■□□□□ 0.03
PDLIM3-202ENST00000284770 OR4D5Q8NGN0 318 aa15.23■□□□□ 0.03
PDLIM3-202ENST00000284770 OR4C13Q8NGP0 309 aa15.23■□□□□ 0.03
PDLIM3-202ENST00000284770 CFHR4Q92496 578 aa15.23■□□□□ 0.03
PDLIM3-202ENST00000284770 FLYWCH2Q96CP2 140 aaKnown RBP15.23■□□□□ 0.03
PDLIM3-202ENST00000284770 RBMXL1Q96E39 390 aaKnown RBP15.23■□□□□ 0.03
PDLIM3-202ENST00000284770 BOLA1Q9Y3E2 137 aa15.23■□□□□ 0.03
PDLIM3-202ENST00000284770 H0YIZ8 118 aa15.22■□□□□ 0.03
PDLIM3-202ENST00000284770 ATG12O94817 140 aa15.22■□□□□ 0.03
PDLIM3-202ENST00000284770 KRASP01116 189 aa15.22■□□□□ 0.03
PDLIM3-202ENST00000284770 FSHBP01225 129 aa15.22■□□□□ 0.03
PDLIM3-202ENST00000284770 CD1BP29016 333 aa15.22■□□□□ 0.03
PDLIM3-202ENST00000284770 OSR1Q8TAX0 266 aaPredicted RBP15.22■□□□□ 0.03
PDLIM3-202ENST00000284770 GPR146Q96CH1 333 aa15.22■□□□□ 0.03
PDLIM3-202ENST00000284770 SPIN2AQ99865 258 aa15.22■□□□□ 0.03
PDLIM3-202ENST00000284770 SPIN2BQ9BPZ2 258 aa15.22■□□□□ 0.03
PDLIM3-202ENST00000284770 RNF126Q9BV68 326 aa15.22■□□□□ 0.03
PDLIM3-202ENST00000284770 PLSCR3Q9NRY6 295 aa15.22■□□□□ 0.03
PDLIM3-202ENST00000284770 FXYD6-FXYD2A0A087WZ82 144 aa15.21■□□□□ 0.03
PDLIM3-202ENST00000284770 MARCH11A6NNE9 402 aa15.21■□□□□ 0.03
PDLIM3-202ENST00000284770 P0C879 139 aa15.21■□□□□ 0.03
PDLIM3-202ENST00000284770 SLC25A6P12236 298 aa15.21■□□□□ 0.03
PDLIM3-202ENST00000284770 NQO2P16083 231 aa15.21■□□□□ 0.03
PDLIM3-202ENST00000284770 G6PCP35575 357 aa15.21■□□□□ 0.03
PDLIM3-202ENST00000284770 ARHGDIBP52566 201 aa15.21■□□□□ 0.03
PDLIM3-202ENST00000284770 AKR1C2P52895 323 aa15.21■□□□□ 0.03
PDLIM3-202ENST00000284770 LGALSLQ3ZCW2 172 aaPredicted RBP15.21■□□□□ 0.03
PDLIM3-202ENST00000284770 TMEM177Q53S58 311 aa15.21■□□□□ 0.03
PDLIM3-202ENST00000284770 TMEM65Q6PI78 240 aa15.21■□□□□ 0.03
PDLIM3-202ENST00000284770 R3HDM4Q96D70 268 aa15.21■□□□□ 0.03
PDLIM3-202ENST00000284770 MBD2Q9UBB5 411 aa15.21■□□□□ 0.03
PDLIM3-202ENST00000284770 NUP50Q9UKX7 468 aa15.21■□□□□ 0.03
PDLIM3-202ENST00000284770 A0A0U1RQK1 487 aa15.21■□□□□ 0.02
PDLIM3-202ENST00000284770 MBPP02686 304 aaPredicted RBP15.21■□□□□ 0.02
PDLIM3-202ENST00000284770 LYL1P12980 280 aa15.21■□□□□ 0.02
PDLIM3-202ENST00000284770 Q6ZRM9 215 aa15.21■□□□□ 0.02
PDLIM3-202ENST00000284770 RRNAD1Q96FB5 475 aaKnown RBP15.21■□□□□ 0.02
PDLIM3-202ENST00000284770 HSPB11Q9Y547 144 aa15.21■□□□□ 0.02
PDLIM3-202ENST00000284770 OTOGQ6ZRI0 2925 aa15.2■□□□□ 0.02
PDLIM3-202ENST00000284770 TEX15Q9BXT5 2789 aa15.2■□□□□ 0.02
PDLIM3-202ENST00000284770 A0A1B0GU03 582 aa15.2■□□□□ 0.02
PDLIM3-202ENST00000284770 SHOXO15266 292 aa15.2■□□□□ 0.02
PDLIM3-202ENST00000284770 PITX3O75364 302 aa15.2■□□□□ 0.02
PDLIM3-202ENST00000284770 VENTXO95231 258 aa15.2■□□□□ 0.02
PDLIM3-202ENST00000284770 HRASP01112 189 aa15.2■□□□□ 0.02
PDLIM3-202ENST00000284770 IZUMO4Q1ZYL8 232 aa15.2■□□□□ 0.02
PDLIM3-202ENST00000284770 TEX29Q8N6K0 151 aa15.2■□□□□ 0.02
PDLIM3-202ENST00000284770 RNASE11Q8TAA1 199 aaKnown RBP15.2■□□□□ 0.02
PDLIM3-202ENST00000284770 THAP6Q8TBB0 222 aa15.2■□□□□ 0.02
PDLIM3-202ENST00000284770 AIFM2Q9BRQ8 373 aa15.2■□□□□ 0.02
PDLIM3-202ENST00000284770 MEGF9Q9H1U4 602 aa15.2■□□□□ 0.02
PDLIM3-202ENST00000284770 FAM96BQ9Y3D0 163 aa15.2■□□□□ 0.02
PDLIM3-202ENST00000284770 MMP24Q9Y5R2 645 aa15.2■□□□□ 0.02
PDLIM3-202ENST00000284770 SRRM4A7MD48 611 aaKnown RBP15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 ARPC5O15511 151 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 CXCL2P19875 107 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 ERVK-16P61578 105 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 RPS16P62249 146 aaKnown RBP15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 POU2AF1Q16633 256 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 THOC7Q6I9Y2 204 aaKnown RBP15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 PRSS54Q6PEW0 395 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 ZNF546Q86UE3 836 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 VKORC1L1Q8N0U8 176 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 DMBX1Q8NFW5 382 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 RHOVQ96L33 236 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 HARBI1Q96MB7 349 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 MS4A7Q9GZW8 240 aaPredicted RBP15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 OR5AC2Q9NZP5 309 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 TNFSF18Q9UNG2 199 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 CSPG4Q6UVK1 2322 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 FAM90A9PA6NNJ1 464 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 BRS3P32247 399 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 S100A10P60903 97 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 H2BFWTQ7Z2G1 175 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 RITA1Q96K30 269 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 RNF5Q99942 180 aa15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 SOX21Q9Y651 276 aaPredicted RBP15.19■□□□□ 0.02
PDLIM3-202ENST00000284770 K7EPK0 472 aa15.18■□□□□ 0.02
PDLIM3-202ENST00000284770 SCGB1D2O95969 90 aa15.18■□□□□ 0.02
PDLIM3-202ENST00000284770 IGKV1D-33P01593 117 aa15.18■□□□□ 0.02
PDLIM3-202ENST00000284770 IGKV1-33P01594 117 aa15.18■□□□□ 0.02
PDLIM3-202ENST00000284770 FBP1P09467 338 aa15.18■□□□□ 0.02
PDLIM3-202ENST00000284770 PET100P0DJ07 73 aa15.18■□□□□ 0.02
PDLIM3-202ENST00000284770 LGALS7P47929 136 aa15.18■□□□□ 0.02
PDLIM3-202ENST00000284770 SMCO1Q147U7 214 aa15.18■□□□□ 0.02
PDLIM3-202ENST00000284770 SSX9Q7RTT3 188 aa15.18■□□□□ 0.02
PDLIM3-202ENST00000284770 FAM71E2Q8N5Q1 922 aa15.18■□□□□ 0.02
PDLIM3-202ENST00000284770 OR1S1Q8NH92 325 aa15.18■□□□□ 0.02
PDLIM3-202ENST00000284770 YAE1D1Q9NRH1 226 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms