RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 IGKV1-12A0A0C4DH73 117 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 F5H5K5 113 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 EFNA2O43921 213 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 IGKV1D-12P01611 117 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 TFF3Q07654 80 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 SLC38A11Q08AI6 406 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 LPAL2Q16609 132 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 HIST3H3Q16695 136 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 TCF24Q7RTU0 167 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 OR10P1Q8NGE3 313 aa13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 FNDC4Q9H6D8 234 aaPredicted RBP13.22□□□□□ -0.29
CTDSP1-201ENST00000273062 SLC22A20A6NK97 555 aa13.21□□□□□ -0.29
CTDSP1-201ENST00000273062 AZU1P20160 251 aa13.21□□□□□ -0.29
CTDSP1-201ENST00000273062 CEACAM3P40198 252 aa13.21□□□□□ -0.29
CTDSP1-201ENST00000273062 RNPS1Q15287 305 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-201ENST00000273062 NAA38Q9BRA0 125 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-201ENST00000273062 TNRC6BQ9UPQ9 1833 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-201ENST00000273062 SCO2A0A1W2PP80 73 aa13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 A6NJY4 79 aa13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 M0R1X1 148 aa13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 SCTP09683 121 aa13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 PSG2P11465 335 aa13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 CCL4P13236 92 aa13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 SRD5A2P31213 254 aa13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 OTX1P32242 354 aaPredicted RBP13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 PPOXP50336 477 aa13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 DAP3P51398 398 aaKnown RBP13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 HBG1P69891 147 aa13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 HBG2P69892 147 aa13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 MYBPHQ13203 477 aa13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 DEFB123Q8N688 67 aa13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 OR1L1Q8NH94 360 aa13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 IL36GQ9NZH8 169 aa13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 CELSR3Q9NYQ7 3312 aa13.21□□□□□ -0.3
CTDSP1-201ENST00000273062 GPR6P46095 362 aaPredicted RBP13.2□□□□□ -0.3
CTDSP1-201ENST00000273062 PMCHL1Q16048 86 aa13.2□□□□□ -0.3
CTDSP1-201ENST00000273062 QTRT1Q9BXR0 403 aaKnown RBP13.2□□□□□ -0.3
CTDSP1-201ENST00000273062 NPVFQ9HCQ7 196 aa13.2□□□□□ -0.3
CTDSP1-201ENST00000273062 BMPR1BO00238 502 aa13.2□□□□□ -0.3
CTDSP1-201ENST00000273062 DHRS3O75911 302 aa13.2□□□□□ -0.3
CTDSP1-201ENST00000273062 PTGDSP41222 190 aa13.2□□□□□ -0.3
CTDSP1-201ENST00000273062 C17orf67Q0P5P2 114 aa13.2□□□□□ -0.3
CTDSP1-201ENST00000273062 SCGB2A2Q13296 93 aa13.2□□□□□ -0.3
CTDSP1-201ENST00000273062 PHYHD1Q5SRE7 291 aa13.2□□□□□ -0.3
CTDSP1-201ENST00000273062 STXBP6Q8NFX7 210 aa13.2□□□□□ -0.3
CTDSP1-201ENST00000273062 RDH5Q92781 318 aa13.2□□□□□ -0.3
CTDSP1-201ENST00000273062 CHRDL1Q9BU40 450 aa13.2□□□□□ -0.3
CTDSP1-201ENST00000273062 PLSCR4Q9NRQ2 329 aa13.2□□□□□ -0.3
CTDSP1-201ENST00000273062 NCOA6Q14686 2063 aaPredicted RBP13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 hDV102S1A0JD36 115 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 IGKV1-39P01597 117 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 IGKV1D-39P04432 117 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 CTSSP25774 331 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 NPY1RP25929 384 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 TGFBR3Q03167 851 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 DAZAP2Q15038 168 aaPredicted RBP13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 MMD2Q8IY49 270 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 TRAV26-1A0A087WT03 109 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 A0A087X0K7 114 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 TRAV38-1A0A0B4J264 116 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 GAGE10A6NGK3 116 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 CLDN14O95500 239 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 TRIP6Q15654 476 aaKnown RBP13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 OR10J3Q5JRS4 329 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 UFSP1Q6NVU6 142 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 JMJD8Q96S16 334 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 ZNF442Q9H7R0 627 aa13.19□□□□□ -0.3
CTDSP1-201ENST00000273062 FAM231BA6NCW3 169 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 FAM181BA6NEQ2 426 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 PGLYRP1O75594 196 aaPredicted RBP13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 S100GP29377 79 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 C19orf35Q6ZS72 473 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 WDR5BQ86VZ2 330 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 THYN1Q9P016 225 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 PPP1R3CQ9UQK1 317 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 PDE6DO43924 150 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 SERPINE2P07093 398 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 TCL1AP56279 114 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 RHOBP62745 196 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 TNXAQ16473 311 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 MRPL14Q6P1L8 145 aaKnown RBP13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 TMEM136Q6ZRR5 245 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 H1FNTQ75WM6 255 aaPredicted RBP13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 STPG3Q8N7X2 389 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 OR2AE1Q8NHA4 323 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 CPT1CQ8TCG5 803 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 CT55Q8WUE5 264 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 METTL7AQ9H8H3 244 aa13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 DIDO1Q9BTC0 2240 aaKnown RBP13.18□□□□□ -0.3
CTDSP1-201ENST00000273062 H0Y980 276 aa13.17□□□□□ -0.3
CTDSP1-201ENST00000273062 IGLV3-1P01715 115 aa13.17□□□□□ -0.3
CTDSP1-201ENST00000273062 PRR31Q5SQ13 230 aa13.17□□□□□ -0.3
CTDSP1-201ENST00000273062 GNB1LQ9BYB4 327 aa13.17□□□□□ -0.3
CTDSP1-201ENST00000273062 MRPL13Q9BYD1 178 aaKnown RBP13.17□□□□□ -0.3
CTDSP1-201ENST00000273062 TMEM38BQ9NVV0 291 aa13.17□□□□□ -0.3
CTDSP1-201ENST00000273062 LAMTOR5O43504 91 aa13.17□□□□□ -0.3
CTDSP1-201ENST00000273062 HAND1O96004 215 aa13.17□□□□□ -0.3
CTDSP1-201ENST00000273062 RAB9AP51151 201 aa13.17□□□□□ -0.3
CTDSP1-201ENST00000273062 CRYBA4P53673 196 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms