RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 OR5A1Q8NGJ0 315 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 OR10AG1Q8NH19 301 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 SRXN1Q9BYN0 137 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 ZNF430Q9H8G1 570 aaPredicted RBP14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 PEF1Q9UBV8 284 aaKnown RBP14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 GSN-AS1Q9NRJ2 163 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 HOXC4P09017 264 aaPredicted RBP14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 LCN2P80188 198 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 HIST1H1AQ02539 215 aaPredicted RBP14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 TFF3Q07654 80 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 FAM201AQ5SY85 155 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 AQP3Q92482 292 aa14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 ZNF107Q9UII5 783 aaPredicted RBP14.39□□□□□ -0.11
TSPAN3-201ENST00000267970 MARCH11A6NNE9 402 aa14.38□□□□□ -0.11
TSPAN3-201ENST00000267970 FCARP24071 287 aa14.38□□□□□ -0.11
TSPAN3-201ENST00000267970 VAX1Q5SQQ9 334 aa14.38□□□□□ -0.11
TSPAN3-201ENST00000267970 CISD1Q9NZ45 108 aaKnown RBP14.38□□□□□ -0.11
TSPAN3-201ENST00000267970 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.38□□□□□ -0.11
TSPAN3-201ENST00000267970 TRAV8-2A0A0B4J237 113 aa14.38□□□□□ -0.11
TSPAN3-201ENST00000267970 DPRXA6NFQ7 191 aa14.38□□□□□ -0.11
TSPAN3-201ENST00000267970 CTSSP25774 331 aa14.38□□□□□ -0.11
TSPAN3-201ENST00000267970 LINC00305Q7Z4B0 112 aa14.38□□□□□ -0.11
TSPAN3-201ENST00000267970 GALNT14Q96FL9 552 aa14.38□□□□□ -0.11
TSPAN3-201ENST00000267970 LHFPL6Q9Y693 200 aa14.38□□□□□ -0.11
TSPAN3-201ENST00000267970 HLA-DQA1P01909 254 aa14.38□□□□□ -0.11
TSPAN3-201ENST00000267970 C1orf185Q5T7R7 199 aa14.38□□□□□ -0.11
TSPAN3-201ENST00000267970 STPG3Q8N7X2 389 aa14.38□□□□□ -0.11
TSPAN3-201ENST00000267970 RP1L1Q8IWN7 2480 aaPredicted RBP14.38□□□□□ -0.11
TSPAN3-201ENST00000267970 PROB1E7EW31 1015 aa14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 GCM2O75603 506 aaPredicted RBP14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 LIMS1P48059 325 aa14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 C2orf68Q2NKX9 166 aa14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 TCF23Q7RTU1 214 aa14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 SCO2A0A1W2PP80 73 aa14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 CGAP01215 116 aa14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 SPCS1Q9Y6A9 102 aa14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 MCM3APO60318 1980 aa14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 FAM106CPP0CH98 169 aa14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 GATA2P23769 480 aaPredicted RBP14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 SMAD7O15105 426 aaKnown RBP14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 MAJINQ3KP22 176 aa14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 TMEM171Q8WVE6 324 aa14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 PAPPAQ13219 1627 aa14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 SCN7AQ01118 1682 aa14.37□□□□□ -0.11
TSPAN3-201ENST00000267970 IGHV1-45A0A0A0MS14 117 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 LINC00614P0C842 121 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 ACSF3Q4G176 576 aaPredicted RBP14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 CDCP2Q5VXM1 449 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 ZNRF1Q8ND25 227 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 WDR54Q9H977 334 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 IDI2-AS1Q9NZ38 188 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 TOMM7Q9P0U1 55 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 A6NNC1 897 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 ZFP36L2P47974 494 aaKnown RBP14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 MTURNQ8N3F0 131 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 PKD1L3Q7Z443 1732 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 H3BUT2 72 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 MGST3O14880 152 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 ICAM4Q14773 271 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 NABP2Q9BQ15 211 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 ZNF815PA8K554 130 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 P2RY6Q15077 328 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 FAM27BQ5VT28 67 aa14.36□□□□□ -0.11
TSPAN3-201ENST00000267970 WFDC12Q8WWY7 111 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 SPSB2Q99619 263 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 LINC00587B1AMM8 73 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 DXOO77932 396 aaKnown RBP14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 ATRAIDQ6UW56 229 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 KIAA1551Q9HCM1 1747 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 TRAV21A0A0B4J279 112 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 TRBV5-5A0A0J9YX44 114 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 MSGN1A6NI15 193 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 C8orf88P0DMB2 117 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 MRPS18AQ9NVS2 196 aaKnown RBP14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 NPIPB8E9PQR5 432 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 NPIPB9F8W1W9 429 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 NPIPB7O75200 414 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 TBX6O95947 436 aaPredicted RBP14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 GLMPQ8WWB7 406 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 KCNE5Q9UJ90 142 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 TDRD6O60522 2096 aaKnown RBP14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 ZNF646O15015 1829 aaPredicted RBP14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 TFF1P04155 84 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 SAA1P0DJI8 122 aaPredicted RBP14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 ZP1P60852 638 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 TMEM187Q14656 261 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 TMEM183AQ8IXX5 376 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 ANAPC13Q9BS18 74 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 SCN8AQ9UQD0 1980 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 NPFFO15130 113 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 APOHP02749 345 aaPredicted RBP14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 NHLRC3Q5JS37 347 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 C11orf68Q9H3H3 251 aaKnown RBP14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 FAM206AQ9NX38 181 aa14.35□□□□□ -0.11
TSPAN3-201ENST00000267970 MT-ND6P03923 174 aa14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 FTH1P19P0C7X4 201 aa14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 C1QL2Q7Z5L3 287 aa14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 LURAP1LQ8IV03 231 aa14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 PNKDQ8N490 385 aa14.34□□□□□ -0.11
TSPAN3-201ENST00000267970 SPSB4Q96A44 273 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms