RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 IGHV3-72A0A0B4J1Y9 119 aa16.59■□□□□ 0.25
RTCA-201ENST00000260563 PIGBOS1A0A0B4J2F0 54 aa16.59■□□□□ 0.25
RTCA-201ENST00000260563 GOSR2O14653 212 aa16.59■□□□□ 0.25
RTCA-201ENST00000260563 TRAPPC2P0DI81 140 aa16.59■□□□□ 0.25
RTCA-201ENST00000260563 TRAPPC2BP0DI82 140 aa16.59■□□□□ 0.25
RTCA-201ENST00000260563 RRASP10301 218 aa16.59■□□□□ 0.25
RTCA-201ENST00000260563 CD24P25063 80 aa16.59■□□□□ 0.25
RTCA-201ENST00000260563 RTL8BQ17RB0 113 aa16.59■□□□□ 0.25
RTCA-201ENST00000260563 OR11H7Q8NGC8 314 aa16.59■□□□□ 0.25
RTCA-201ENST00000260563 OR4S2Q8NH73 311 aa16.59■□□□□ 0.25
RTCA-201ENST00000260563 PIFOQ8TCI5 191 aa16.59■□□□□ 0.25
RTCA-201ENST00000260563 CHIAQ9BZP6 476 aa16.59■□□□□ 0.25
RTCA-201ENST00000260563 MGAT4CQ9UBM8 478 aa16.59■□□□□ 0.25
RTCA-201ENST00000260563 PITPNC1Q9UKF7 332 aa16.59■□□□□ 0.25
RTCA-201ENST00000260563 NF1P21359 2839 aa16.58■□□□□ 0.25
RTCA-201ENST00000260563 S1PR2O95136 353 aa16.58■□□□□ 0.24
RTCA-201ENST00000260563 HPRT1P00492 218 aa16.58■□□□□ 0.24
RTCA-201ENST00000260563 IGKV1D-33P01593 117 aa16.58■□□□□ 0.24
RTCA-201ENST00000260563 IGKV1-33P01594 117 aa16.58■□□□□ 0.24
RTCA-201ENST00000260563 IGKV1-39P01597 117 aa16.58■□□□□ 0.24
RTCA-201ENST00000260563 IGKV1D-39P04432 117 aa16.58■□□□□ 0.24
RTCA-201ENST00000260563 SNRNP70P08621 437 aaKnown RBP16.58■□□□□ 0.24
RTCA-201ENST00000260563 HOXB5P09067 269 aa16.58■□□□□ 0.24
RTCA-201ENST00000260563 FAM106CPP0CH98 169 aa16.58■□□□□ 0.24
RTCA-201ENST00000260563 CD1BP29016 333 aa16.58■□□□□ 0.24
RTCA-201ENST00000260563 MC5RP33032 325 aa16.58■□□□□ 0.24
RTCA-201ENST00000260563 UBA52P62987 128 aaKnown RBP16.58■□□□□ 0.24
RTCA-201ENST00000260563 HES1Q14469 280 aa16.58■□□□□ 0.24
RTCA-201ENST00000260563 C2orf68Q2NKX9 166 aa16.58■□□□□ 0.24
RTCA-201ENST00000260563 LYZL2Q7Z4W2 148 aa16.58■□□□□ 0.24
RTCA-201ENST00000260563 SLC35G3Q8N808 338 aa16.58■□□□□ 0.24
RTCA-201ENST00000260563 RAB18Q9NP72 206 aa16.58■□□□□ 0.24
RTCA-201ENST00000260563 DUXBA0A1W2PPF3 345 aa16.57■□□□□ 0.24
RTCA-201ENST00000260563 FAM90A9PA6NNJ1 464 aa16.57■□□□□ 0.24
RTCA-201ENST00000260563 H7C2Y5 167 aa16.57■□□□□ 0.24
RTCA-201ENST00000260563 TRIM77I1YAP6 450 aa16.57■□□□□ 0.24
RTCA-201ENST00000260563 ADAP1O75689 374 aa16.57■□□□□ 0.24
RTCA-201ENST00000260563 CXCL3P19876 107 aa16.57■□□□□ 0.24
RTCA-201ENST00000260563 DHRS7BQ6IAN0 325 aaPredicted RBP16.57■□□□□ 0.24
RTCA-201ENST00000260563 PDPNQ86YL7 162 aa16.57■□□□□ 0.24
RTCA-201ENST00000260563 PLEKHA2Q9HB19 425 aa16.57■□□□□ 0.24
RTCA-201ENST00000260563 WASHC3Q9Y3C0 194 aa16.57■□□□□ 0.24
RTCA-201ENST00000260563 CCSO14618 274 aa16.56■□□□□ 0.24
RTCA-201ENST00000260563 CRYZL1O95825 349 aa16.56■□□□□ 0.24
RTCA-201ENST00000260563 RNASE1P07998 156 aaKnown RBP16.56■□□□□ 0.24
RTCA-201ENST00000260563 HLA-GP17693 338 aa16.56■□□□□ 0.24
RTCA-201ENST00000260563 PRIMA1Q86XR5 153 aa16.56■□□□□ 0.24
RTCA-201ENST00000260563 THNSL2Q86YJ6 484 aa16.56■□□□□ 0.24
RTCA-201ENST00000260563 OR5M8Q8NGP6 311 aa16.56■□□□□ 0.24
RTCA-201ENST00000260563 TMED3Q9Y3Q3 217 aa16.56■□□□□ 0.24
RTCA-201ENST00000260563 IFNA21P01568 189 aa16.55■□□□□ 0.24
RTCA-201ENST00000260563 IGKV1-16P04430 117 aa16.55■□□□□ 0.24
RTCA-201ENST00000260563 TMEM11P17152 192 aa16.55■□□□□ 0.24
RTCA-201ENST00000260563 GGNBP1Q5YKI7 109 aa16.55■□□□□ 0.24
RTCA-201ENST00000260563 TMEM219Q86XT9 240 aa16.55■□□□□ 0.24
RTCA-201ENST00000260563 COMMD9Q9P000 198 aa16.55■□□□□ 0.24
RTCA-201ENST00000260563 JMJD1CQ15652 2540 aa16.55■□□□□ 0.24
RTCA-201ENST00000260563 A6NDX4 124 aa16.55■□□□□ 0.24
RTCA-201ENST00000260563 ATG12O94817 140 aa16.55■□□□□ 0.24
RTCA-201ENST00000260563 VDAC1P21796 283 aa16.55■□□□□ 0.24
RTCA-201ENST00000260563 SRSF2Q01130 221 aaKnown RBP16.55■□□□□ 0.24
RTCA-201ENST00000260563 OR2T10Q8NGZ9 312 aa16.55■□□□□ 0.24
RTCA-201ENST00000260563 FLYWCH2Q96CP2 140 aaKnown RBP16.55■□□□□ 0.24
RTCA-201ENST00000260563 RBMXL1Q96E39 390 aaKnown RBP16.55■□□□□ 0.24
RTCA-201ENST00000260563 FAM25EA8MYX2 175 aa16.54■□□□□ 0.24
RTCA-201ENST00000260563 SIX6O95475 246 aa16.54■□□□□ 0.24
RTCA-201ENST00000260563 MOSP00540 346 aa16.54■□□□□ 0.24
RTCA-201ENST00000260563 KRASP01116 189 aa16.54■□□□□ 0.24
RTCA-201ENST00000260563 G6PCP35575 357 aa16.54■□□□□ 0.24
RTCA-201ENST00000260563 AKR1C2P52895 323 aa16.54■□□□□ 0.24
RTCA-201ENST00000260563 EBI3Q14213 229 aa16.54■□□□□ 0.24
RTCA-201ENST00000260563 FBLN7Q53RD9 439 aa16.54■□□□□ 0.24
RTCA-201ENST00000260563 TMEM177Q53S58 311 aa16.54■□□□□ 0.24
RTCA-201ENST00000260563 OR4C13Q8NGP0 309 aa16.54■□□□□ 0.24
RTCA-201ENST00000260563 RNASE11Q8TAA1 199 aaKnown RBP16.54■□□□□ 0.24
RTCA-201ENST00000260563 OSR1Q8TAX0 266 aaPredicted RBP16.54■□□□□ 0.24
RTCA-201ENST00000260563 R3HDM4Q96D70 268 aa16.54■□□□□ 0.24
RTCA-201ENST00000260563 SEC22AQ96IW7 307 aa16.54■□□□□ 0.24
RTCA-201ENST00000260563 C13orf42A0A1B0GVH6 325 aa16.53■□□□□ 0.24
RTCA-201ENST00000260563 C5orf51A6NDU8 294 aa16.53■□□□□ 0.24
RTCA-201ENST00000260563 MARCH11A6NNE9 402 aa16.53■□□□□ 0.24
RTCA-201ENST00000260563 GPR137BO60478 399 aa16.53■□□□□ 0.24
RTCA-201ENST00000260563 IGKV1-5P01602 117 aa16.53■□□□□ 0.24
RTCA-201ENST00000260563 NQO2P16083 231 aa16.53■□□□□ 0.24
RTCA-201ENST00000260563 H2BFSP57053 126 aa16.53■□□□□ 0.24
RTCA-201ENST00000260563 GSG1LQ6UXU4 331 aa16.53■□□□□ 0.24
RTCA-201ENST00000260563 C16orf82Q7Z2V1 217 aa16.53■□□□□ 0.24
RTCA-201ENST00000260563 AKAP14Q86UN6 197 aa16.53■□□□□ 0.24
RTCA-201ENST00000260563 LSM10Q969L4 123 aaKnown RBP16.53■□□□□ 0.24
RTCA-201ENST00000260563 RRNAD1Q96FB5 475 aaKnown RBP16.53■□□□□ 0.24
RTCA-201ENST00000260563 EAF1Q96JC9 268 aaPredicted RBP16.53■□□□□ 0.24
RTCA-201ENST00000260563 SLC25A33Q9BSK2 321 aa16.53■□□□□ 0.24
RTCA-201ENST00000260563 ZNF436Q9C0F3 470 aaPredicted RBP16.53■□□□□ 0.24
RTCA-201ENST00000260563 MPTX1A8MV57 137 aa16.52■□□□□ 0.24
RTCA-201ENST00000260563 SHOXO15266 292 aa16.52■□□□□ 0.24
RTCA-201ENST00000260563 CHST1O43916 411 aa16.52■□□□□ 0.24
RTCA-201ENST00000260563 OR2F2O95006 317 aa16.52■□□□□ 0.24
RTCA-201ENST00000260563 CD83Q01151 205 aa16.52■□□□□ 0.24
RTCA-201ENST00000260563 HNF4GQ14541 408 aa16.52■□□□□ 0.24
RTCA-201ENST00000260563 NMSQ5H8A3 153 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms