RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 TMEM268Q5VZI3 342 aa16.05■□□□□ 0.16
SNRPA-201ENST00000243563 TCTEX1D1Q8N7M0 179 aa16.05■□□□□ 0.16
SNRPA-201ENST00000243563 TAF15Q92804 592 aaKnown RBP eCLIP16.05■□□□□ 0.16
SNRPA-201ENST00000243563 R3HDM4Q96D70 268 aa16.05■□□□□ 0.16
SNRPA-201ENST00000243563 SEC22AQ96IW7 307 aa16.05■□□□□ 0.16
SNRPA-201ENST00000243563 TMEM56Q96MV1 263 aa16.05■□□□□ 0.16
SNRPA-201ENST00000243563 RBM14Q96PK6 669 aaKnown RBP16.05■□□□□ 0.16
SNRPA-201ENST00000243563 SLC25A33Q9BSK2 321 aa16.05■□□□□ 0.16
SNRPA-201ENST00000243563 FAM212BQ9NTI7 297 aaPredicted RBP16.05■□□□□ 0.16
SNRPA-201ENST00000243563 VPREB3Q9UKI3 123 aa16.05■□□□□ 0.16
SNRPA-201ENST00000243563 KCNIP3Q9Y2W7 256 aa16.05■□□□□ 0.16
SNRPA-201ENST00000243563 ALG5Q9Y673 324 aa16.05■□□□□ 0.16
SNRPA-201ENST00000243563 TMEM56-RWDD3S4R434 201 aa16.05■□□□□ 0.16
SNRPA-201ENST00000243563 SLC25A17O43808 307 aa16.04■□□□□ 0.16
SNRPA-201ENST00000243563 KRASP01116 189 aa16.04■□□□□ 0.16
SNRPA-201ENST00000243563 AMY1AP04745 511 aa16.04■□□□□ 0.16
SNRPA-201ENST00000243563 SAA1P0DJI8 122 aaPredicted RBP16.04■□□□□ 0.16
SNRPA-201ENST00000243563 MMDQ15546 238 aa16.04■□□□□ 0.16
SNRPA-201ENST00000243563 Q8N9W7 124 aa16.04■□□□□ 0.16
SNRPA-201ENST00000243563 OSR1Q8TAX0 266 aaPredicted RBP16.04■□□□□ 0.16
SNRPA-201ENST00000243563 CD300LFQ8TDQ1 290 aa16.04■□□□□ 0.16
SNRPA-201ENST00000243563 ZNF431Q8TF32 576 aaPredicted RBP16.04■□□□□ 0.16
SNRPA-201ENST00000243563 FBXL15Q9H469 300 aa16.04■□□□□ 0.16
SNRPA-201ENST00000243563 TRAV3A0A0B4J244 114 aa16.03■□□□□ 0.16
SNRPA-201ENST00000243563 DUS4LO95620 317 aaKnown RBP16.03■□□□□ 0.16
SNRPA-201ENST00000243563 CRYGBP07316 175 aa16.03■□□□□ 0.16
SNRPA-201ENST00000243563 C2orf68Q2NKX9 166 aa16.03■□□□□ 0.16
SNRPA-201ENST00000243563 LYZL2Q7Z4W2 148 aa16.03■□□□□ 0.16
SNRPA-201ENST00000243563 SLC35G3Q8N808 338 aa16.03■□□□□ 0.16
SNRPA-201ENST00000243563 NPBQ8NG41 125 aa16.03■□□□□ 0.16
SNRPA-201ENST00000243563 OR5R1Q8NH85 324 aa16.03■□□□□ 0.16
SNRPA-201ENST00000243563 COMMD9Q9P000 198 aa16.03■□□□□ 0.16
SNRPA-201ENST00000243563 C7orf66A4D0T2 115 aa16.02■□□□□ 0.16
SNRPA-201ENST00000243563 MARCH11A6NNE9 402 aa16.02■□□□□ 0.16
SNRPA-201ENST00000243563 NBR2O15453 112 aa16.02■□□□□ 0.16
SNRPA-201ENST00000243563 OR2F2O95006 317 aa16.02■□□□□ 0.16
SNRPA-201ENST00000243563 NDUFA3O95167 84 aa16.02■□□□□ 0.16
SNRPA-201ENST00000243563 DHFRP00374 187 aa16.02■□□□□ 0.16
SNRPA-201ENST00000243563 P0C879 139 aa16.02■□□□□ 0.16
SNRPA-201ENST00000243563 HILS1P60008 231 aa16.02■□□□□ 0.16
SNRPA-201ENST00000243563 CBX3Q13185 183 aa16.02■□□□□ 0.16
SNRPA-201ENST00000243563 SCGB2A2Q13296 93 aa16.02■□□□□ 0.16
SNRPA-201ENST00000243563 RBMS3Q6XE24 437 aaKnown RBP16.02■□□□□ 0.16
SNRPA-201ENST00000243563 FAM71E2Q8N5Q1 922 aa16.02■□□□□ 0.16
SNRPA-201ENST00000243563 MITD1Q8WV92 249 aa16.02■□□□□ 0.16
SNRPA-201ENST00000243563 RHOVQ96L33 236 aa16.02■□□□□ 0.16
SNRPA-201ENST00000243563 TNCP24821 2201 aa16.02■□□□□ 0.16
SNRPA-201ENST00000243563 FCN1O00602 326 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 RRHO14718 337 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 ADAP1O75689 374 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 B3GALNT1O75752 331 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 ANXA3P12429 323 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 NQO2P16083 231 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 PJVKQ0ZLH3 352 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 POU2AF1Q16633 256 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 OR4A47Q6IF82 309 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 Q6ZS46 218 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 PUSL1Q8N0Z8 303 aaKnown RBP16.01■□□□□ 0.15
SNRPA-201ENST00000243563 MINDY2Q8NBR6 621 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 RBPMSQ93062 196 aaKnown RBP16.01■□□□□ 0.15
SNRPA-201ENST00000243563 TMEM140Q9NV12 185 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 METTL1Q9UBP6 276 aaKnown RBP16.01■□□□□ 0.15
SNRPA-201ENST00000243563 POMT1Q9Y6A1 747 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 NCBP2LA6PVI3 153 aaKnown RBP16.01■□□□□ 0.15
SNRPA-201ENST00000243563 PRAF2O60831 178 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 OR9G9P0C7N8 305 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 MYOD1P15172 320 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 SSBP2P81877 361 aaPredicted RBP16.01■□□□□ 0.15
SNRPA-201ENST00000243563 ZNF695Q8IW36 515 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 LGI3Q8N145 548 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 C5orf56Q8N8D9 126 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 LRTM2Q8N967 370 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 ZNF418Q8TF45 676 aaPredicted RBP16.01■□□□□ 0.15
SNRPA-201ENST00000243563 RNF5Q99942 180 aa16.01■□□□□ 0.15
SNRPA-201ENST00000243563 BTBD17A6NE02 478 aa16■□□□□ 0.15
SNRPA-201ENST00000243563 DBX1A6NMT0 343 aa16■□□□□ 0.15
SNRPA-201ENST00000243563 MPTX1A8MV57 137 aa16■□□□□ 0.15
SNRPA-201ENST00000243563 GPR137BO60478 399 aa16■□□□□ 0.15
SNRPA-201ENST00000243563 IL6RP08887 468 aaPredicted RBP16■□□□□ 0.15
SNRPA-201ENST00000243563 LGALS7P47929 136 aa16■□□□□ 0.15
SNRPA-201ENST00000243563 UBE2KP61086 200 aa16■□□□□ 0.15
SNRPA-201ENST00000243563 Q6ZRM9 215 aa16■□□□□ 0.15
SNRPA-201ENST00000243563 TMEM86BQ8N661 226 aa16■□□□□ 0.15
SNRPA-201ENST00000243563 DMBX1Q8NFW5 382 aa16■□□□□ 0.15
SNRPA-201ENST00000243563 CLCC1Q96S66 551 aa16■□□□□ 0.15
SNRPA-201ENST00000243563 TSNAXQ99598 290 aaKnown RBP16■□□□□ 0.15
SNRPA-201ENST00000243563 NSG2Q9Y328 171 aa16■□□□□ 0.15
SNRPA-201ENST00000243563 MOB4Q9Y3A3 225 aa16■□□□□ 0.15
SNRPA-201ENST00000243563 NIPBLQ6KC79 2804 aaeCLIP16■□□□□ 0.15
SNRPA-201ENST00000243563 CCSO14618 274 aa15.99■□□□□ 0.15
SNRPA-201ENST00000243563 HRASP01112 189 aa15.99■□□□□ 0.15
SNRPA-201ENST00000243563 HOXB5P09067 269 aa15.99■□□□□ 0.15
SNRPA-201ENST00000243563 BLCAPP62952 87 aa15.99■□□□□ 0.15
SNRPA-201ENST00000243563 UBA52P62987 128 aaKnown RBP15.99■□□□□ 0.15
SNRPA-201ENST00000243563 C5orf64Q2M2E5 130 aa15.99■□□□□ 0.15
SNRPA-201ENST00000243563 Q6ZNX1 250 aa15.99■□□□□ 0.15
SNRPA-201ENST00000243563 C12orf45Q8N5I9 185 aaPredicted RBP15.99■□□□□ 0.15
SNRPA-201ENST00000243563 UXS1Q8NBZ7 420 aa15.99■□□□□ 0.15
SNRPA-201ENST00000243563 IL22RA2Q969J5 263 aa15.99■□□□□ 0.15
SNRPA-201ENST00000243563 GPR146Q96CH1 333 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms