RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 EIF3GO75821 320 aaKnown RBP eCLIP11.3□□□□□ -0.6
COL1A1-201ENST00000225964 RPL39P5Q59GN2 51 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 SAXO1Q8IYX7 474 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 MEGF10Q96KG7 1140 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 FAM90A10PA6NDY2 464 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 FAM90A18PA6NE21 464 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 FAM90A16PA6NEW6 464 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 FAM90A20PA6NIJ5 464 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 FAM90A8PA6NJQ4 464 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 FAM90A7PA6NKC0 464 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 FAM90A22PA8MWA6 464 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 FAM90A12PA8MX19 464 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 FAM90A5PA8MXJ8 464 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 FAM90A23PA8MXZ1 464 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 FAM90A15PP0C7V4 464 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 FAM90A13PP0C7W8 464 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 FAM90A14PP0C7W9 464 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 FAM90A24PP0C7X0 464 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 CDX1P47902 265 aaPredicted RBP11.3□□□□□ -0.6
COL1A1-201ENST00000225964 STPG2Q8N412 459 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 ZNF418Q8TF45 676 aaPredicted RBP11.3□□□□□ -0.6
COL1A1-201ENST00000225964 COL25A1Q9BXS0 654 aaPredicted RBP11.3□□□□□ -0.6
COL1A1-201ENST00000225964 FAM206AQ9NX38 181 aa11.3□□□□□ -0.6
COL1A1-201ENST00000225964 CASP8AP2Q9UKL3 1982 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 CRYBB3P26998 211 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 RNASE4P34096 147 aaKnown RBP11.29□□□□□ -0.6
COL1A1-201ENST00000225964 HINT1P49773 126 aaPredicted RBP11.29□□□□□ -0.6
COL1A1-201ENST00000225964 IRF3Q14653 427 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 UBE2V2Q15819 145 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 PPP1R27Q86WC6 154 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 CRYBA2P53672 197 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 ZNF345Q14585 488 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 NSUN5P1Q3KNT7 163 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 OR4D5Q8NGN0 318 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 NPIPB3Q92617 1050 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 MYO7AQ13402 2215 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 MARF1Q9Y4F3 1742 aaKnown RBP11.29□□□□□ -0.6
COL1A1-201ENST00000225964 IGLV1-36A0A0B4J1U3 117 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 HSPB1P04792 205 aaKnown RBP11.29□□□□□ -0.6
COL1A1-201ENST00000225964 SIGIRRQ6IA17 410 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 TRBV20OR9-2A0A075B6H5 130 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 CDKN1AP38936 164 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 CLEC19AQ6UXS0 136 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 Q6ZT83 130 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 FAM181AQ8N9Y4 354 aa11.29□□□□□ -0.6
COL1A1-201ENST00000225964 TDRD6O60522 2096 aaKnown RBP11.29□□□□□ -0.6
COL1A1-201ENST00000225964 HKR1P10072 659 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 AQP10Q96PS8 301 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 ARFGEF1Q9Y6D6 1849 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 PROB1E7EW31 1015 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 CELA3AP09093 270 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 ABLIM2Q6H8Q1 611 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 C2orf88Q9BSF0 95 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 FBXL7Q9UJT9 491 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 TRBV5-3A0A0A0MS03 114 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 LIMS1P48059 325 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 PKIAP61925 76 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 TIMM23BQ5SRD1 257 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 PPP1R32Q7Z5V6 425 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 OR5P3Q8WZ94 311 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 PEMTQ9UBM1 199 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 TUBD1Q9UJT1 453 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 FOXA2Q9Y261 457 aaPredicted RBP11.28□□□□□ -0.6
COL1A1-201ENST00000225964 COX5BP10606 129 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 KLK2P20151 261 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 ZNF818PQ6ZRF7 136 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 C1orf162Q8NEQ5 155 aaPredicted RBP11.28□□□□□ -0.6
COL1A1-201ENST00000225964 FBXL15Q9H469 300 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 CEACAM1P13688 526 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 C10orf128Q5T292 105 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 PGPEP1Q9NXJ5 209 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 LEPROTL1O95214 131 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 DNAL4O96015 105 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 CD1AP06126 327 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 GZMMP51124 257 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 COL5A1-AS1Q5SY13 56 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 COLCA1Q6ZS62 124 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 CYP2G1PQ6ZSU1 146 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 FAM57AQ8TBR7 257 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 TRAF4Q9BUZ4 470 aaPredicted RBP11.28□□□□□ -0.6
COL1A1-201ENST00000225964 TCF19Q9Y242 345 aa11.28□□□□□ -0.6
COL1A1-201ENST00000225964 MTCL1Q9Y4B5 1905 aaKnown RBP11.27□□□□□ -0.6
COL1A1-201ENST00000225964 ERGP11308 486 aa11.27□□□□□ -0.6
COL1A1-201ENST00000225964 PRSS53Q2L4Q9 553 aa11.27□□□□□ -0.6
COL1A1-201ENST00000225964 TMEM30BQ3MIR4 351 aa11.27□□□□□ -0.6
COL1A1-201ENST00000225964 FAM201AQ5SY85 155 aa11.27□□□□□ -0.6
COL1A1-201ENST00000225964 PRSS23O95084 383 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 FABP2P12104 132 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 MUC1P15941 1255 aaPredicted RBP11.27□□□□□ -0.61
COL1A1-201ENST00000225964 FUT5Q11128 374 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 JOSD1Q15040 202 aaPredicted RBP11.27□□□□□ -0.61
COL1A1-201ENST00000225964 TCF24Q7RTU0 167 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 STHQ8IWL8 128 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 MRPL32Q9BYC8 188 aaKnown RBP11.27□□□□□ -0.61
COL1A1-201ENST00000225964 MRPS18AQ9NVS2 196 aaKnown RBP11.27□□□□□ -0.61
COL1A1-201ENST00000225964 TDGF1P13385 188 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 ASIPP42127 132 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 C1QTNF12Q5T7M4 302 aa11.27□□□□□ -0.61
COL1A1-201ENST00000225964 C8orf82Q6P1X6 216 aaPredicted RBP11.27□□□□□ -0.61
COL1A1-201ENST00000225964 AQP3Q92482 292 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms