RNA–Protein interactions for RNA: ENST00000641471.1

PPT1-215, Transcript of palmitoyl-protein thioesterase 1, human

BASIC

Gene PPT1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPT1-215	ENST00000641471	PDE8B	O95263	885 aa		18.48	■□□□□ 0.55
PPT1-215	ENST00000641471	PHKA1	P46020	1223 aa		18.48	■□□□□ 0.55
PPT1-215	ENST00000641471	ZSCAN25	Q6NSZ9	544 aa		18.48	■□□□□ 0.55
PPT1-215	ENST00000641471	LINC00301	Q8NCQ3	95 aa		18.48	■□□□□ 0.55
PPT1-215	ENST00000641471	FBXO18	Q8NFZ0	1043 aa		18.48	■□□□□ 0.55
PPT1-215	ENST00000641471	MRPS27	Q92552	414 aa	Known RBP	18.48	■□□□□ 0.55
PPT1-215	ENST00000641471	GJB4	Q9NTQ9	266 aa		18.48	■□□□□ 0.55
PPT1-215	ENST00000641471	CLIC4	Q9Y696	253 aa		18.48	■□□□□ 0.55
PPT1-215	ENST00000641471	DHX16	O60231	1041 aa	Known RBP	18.48	■□□□□ 0.55
PPT1-215	ENST00000641471	ARID4A	P29374	1257 aa	Predicted RBP	18.48	■□□□□ 0.55
PPT1-215	ENST00000641471	LRMP	Q12912	555 aa		18.48	■□□□□ 0.55
PPT1-215	ENST00000641471	DRC7	Q8IY82	874 aa		18.48	■□□□□ 0.55
PPT1-215	ENST00000641471	FMR1NB	Q8N0W7	255 aa	Predicted RBP	18.48	■□□□□ 0.55
PPT1-215	ENST00000641471	KIF28P	B7ZC32	967 aa		18.47	■□□□□ 0.55
PPT1-215	ENST00000641471	PDE8A	O60658	829 aa		18.47	■□□□□ 0.55
PPT1-215	ENST00000641471	TTF1	Q15361	905 aa	Predicted RBP	18.47	■□□□□ 0.55
PPT1-215	ENST00000641471	CCDC102B	Q68D86	513 aa		18.47	■□□□□ 0.55
PPT1-215	ENST00000641471	SARM1	Q6SZW1	724 aa		18.47	■□□□□ 0.55
PPT1-215	ENST00000641471	CYB5R4	Q7L1T6	521 aa		18.47	■□□□□ 0.55
PPT1-215	ENST00000641471	LAMB2	P55268	1798 aa		18.47	■□□□□ 0.55
PPT1-215	ENST00000641471	ZNF532	Q9HCE3	1301 aa		18.47	■□□□□ 0.55
PPT1-215	ENST00000641471	IDH1	O75874	414 aa	Known RBP	18.47	■□□□□ 0.55
PPT1-215	ENST00000641471	CDC25B	P30305	580 aa		18.47	■□□□□ 0.55
PPT1-215	ENST00000641471	UBE3C	Q15386	1083 aa		18.47	■□□□□ 0.55
PPT1-215	ENST00000641471	ADAL	Q6DHV7	355 aa		18.47	■□□□□ 0.55
PPT1-215	ENST00000641471	WWC3	Q9ULE0	1092 aa		18.47	■□□□□ 0.55
PPT1-215	ENST00000641471	TIAM2	Q8IVF5	1701 aa		18.47	■□□□□ 0.55
PPT1-215	ENST00000641471	BCOR	Q6W2J9	1755 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471		A0A1W2PQ27	194 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471		A0A1W2PQ64	194 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471		A0A1W2PQD8	194 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	POLR3D	P05423	398 aa	Predicted RBP	18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	PDE6A	P16499	860 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	GTF2F1	P35269	517 aa	Known RBP eCLIP	18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	MYSM1	Q5VVJ2	828 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	DHX40	Q8IX18	779 aa	Known RBP	18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	POLR3E	Q9NVU0	708 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	CLIP2	Q9UDT6	1046 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	ZMYM6	O95789	1325 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	TCRBV5S4A2T	A0A5A2	114 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	GOLGA6L19	H0YKK7	550 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	CPLX1	O14810	134 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	STK38	Q15208	465 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	CCDC144B	Q3MJ40	725 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	CCDC144CP	Q8IYA2	1237 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	ERCC4	Q92889	916 aa	Predicted RBP	18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	TBC1D2B	Q9UPU7	963 aa		18.46	■□□□□ 0.55
PPT1-215	ENST00000641471	NEDD4	P46934	1319 aa		18.45	■□□□□ 0.54
PPT1-215	ENST00000641471		A0A1B0GVL5	298 aa		18.45	■□□□□ 0.54
PPT1-215	ENST00000641471	SH2B2	O14492	632 aa	Predicted RBP	18.45	■□□□□ 0.54
PPT1-215	ENST00000641471	YEATS4	O95619	227 aa		18.45	■□□□□ 0.54
PPT1-215	ENST00000641471	FGFR2	P21802	821 aa		18.45	■□□□□ 0.54
PPT1-215	ENST00000641471	KIF23	Q02241	960 aa	Predicted RBP	18.45	■□□□□ 0.54
PPT1-215	ENST00000641471	BRAP	Q7Z569	592 aa		18.45	■□□□□ 0.54
PPT1-215	ENST00000641471	DZIP3	Q86Y13	1208 aa	Known RBP	18.45	■□□□□ 0.54
PPT1-215	ENST00000641471	ANGEL1	Q9UNK9	670 aa	Known RBP	18.45	■□□□□ 0.54
PPT1-215	ENST00000641471	ERVV-1	B6SEH8	477 aa		18.45	■□□□□ 0.54
PPT1-215	ENST00000641471	NDUFA8	P51970	172 aa		18.45	■□□□□ 0.54
PPT1-215	ENST00000641471	ZNF34	Q8IZ26	560 aa		18.45	■□□□□ 0.54
PPT1-215	ENST00000641471	ANO10	Q9NW15	660 aa		18.45	■□□□□ 0.54
PPT1-215	ENST00000641471	CASZ1	Q86V15	1759 aa		18.44	■□□□□ 0.54
PPT1-215	ENST00000641471	RREB1	Q92766	1687 aa		18.44	■□□□□ 0.54
PPT1-215	ENST00000641471	MYH14	Q7Z406	1995 aa	Known RBP	18.44	■□□□□ 0.54
PPT1-215	ENST00000641471	TRDN	Q13061	729 aa		18.44	■□□□□ 0.54
PPT1-215	ENST00000641471	KCNG4	Q8TDN1	519 aa		18.44	■□□□□ 0.54
PPT1-215	ENST00000641471		A0A1B0GUL6	1792 aa		18.44	■□□□□ 0.54
PPT1-215	ENST00000641471	UQCRFS1P1	P0C7P4	283 aa		18.44	■□□□□ 0.54
PPT1-215	ENST00000641471	PRKCSH	P14314	528 aa	Predicted RBP	18.44	■□□□□ 0.54
PPT1-215	ENST00000641471	IL6ST	P40189	918 aa	Predicted RBP	18.44	■□□□□ 0.54
PPT1-215	ENST00000641471	PUM3	Q15397	648 aa	Known RBP	18.44	■□□□□ 0.54
PPT1-215	ENST00000641471	HELB	Q8NG08	1087 aa	Predicted RBP	18.44	■□□□□ 0.54
PPT1-215	ENST00000641471	TSC1	Q92574	1164 aa		18.44	■□□□□ 0.54
PPT1-215	ENST00000641471	MAP7D2	Q96T17	732 aa		18.44	■□□□□ 0.54
PPT1-215	ENST00000641471	SENP2	Q9HC62	589 aa		18.44	■□□□□ 0.54
PPT1-215	ENST00000641471	SPTLC2	O15270	562 aa		18.43	■□□□□ 0.54
PPT1-215	ENST00000641471	CACTIN	Q8WUQ7	758 aa	Known RBP	18.43	■□□□□ 0.54
PPT1-215	ENST00000641471	SYTL4	Q96C24	671 aa	Predicted RBP	18.43	■□□□□ 0.54
PPT1-215	ENST00000641471	MRFAP1L1	Q96HT8	127 aa		18.43	■□□□□ 0.54
PPT1-215	ENST00000641471	AIFM3	Q96NN9	605 aa		18.43	■□□□□ 0.54
PPT1-215	ENST00000641471	MYH6	P13533	1939 aa		18.43	■□□□□ 0.54
PPT1-215	ENST00000641471		B4E1Z4	1266 aa		18.42	■□□□□ 0.54
PPT1-215	ENST00000641471	APP	P05067	770 aa		18.42	■□□□□ 0.54
PPT1-215	ENST00000641471	LPIN2	Q92539	896 aa		18.42	■□□□□ 0.54
PPT1-215	ENST00000641471	STRBP	Q96SI9	672 aa	Known RBP	18.42	■□□□□ 0.54
PPT1-215	ENST00000641471	COL22A1	Q8NFW1	1626 aa	Predicted RBP	18.42	■□□□□ 0.54
PPT1-215	ENST00000641471	MROH5	Q6ZUA9	1318 aa		18.42	■□□□□ 0.54
PPT1-215	ENST00000641471	RXRA	P19793	462 aa		18.42	■□□□□ 0.54
PPT1-215	ENST00000641471	METAP2	P50579	478 aa	Known RBP eCLIP	18.42	■□□□□ 0.54
PPT1-215	ENST00000641471	SF3A1	Q15459	793 aa	Known RBP	18.42	■□□□□ 0.54
PPT1-215	ENST00000641471	CDC27	P30260	824 aa		18.41	■□□□□ 0.54
PPT1-215	ENST00000641471	ANO1	Q5XXA6	986 aa		18.41	■□□□□ 0.54
PPT1-215	ENST00000641471	APOA5	Q6Q788	366 aa		18.41	■□□□□ 0.54
PPT1-215	ENST00000641471	CEP57L1	Q8IYX8	460 aa		18.41	■□□□□ 0.54
PPT1-215	ENST00000641471	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	18.41	■□□□□ 0.54
PPT1-215	ENST00000641471	MROH7-TTC4	A0A0A0MT08	1334 aa		18.41	■□□□□ 0.54
PPT1-215	ENST00000641471	BECN2	A8MW95	431 aa		18.41	■□□□□ 0.54
PPT1-215	ENST00000641471	AXDND1	Q5T1B0	1012 aa	Predicted RBP	18.41	■□□□□ 0.54
PPT1-215	ENST00000641471	AOPEP	Q8N6M6	819 aa		18.41	■□□□□ 0.54
PPT1-215	ENST00000641471	RGS22	Q8NE09	1264 aa		18.41	■□□□□ 0.54
PPT1-215	ENST00000641471	AIDA	Q96BJ3	306 aa		18.4	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms