RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 EPB41L2O43491 1005 aaKnown RBP23.83■■□□□ 1.41
PHGDH-210ENST00000641115 ZNF589Q86UQ0 364 aaPredicted RBP23.83■■□□□ 1.41
PHGDH-210ENST00000641115 M0R2C6 588 aa23.82■■□□□ 1.4
PHGDH-210ENST00000641115 CYP7A1P22680 504 aa23.82■■□□□ 1.4
PHGDH-210ENST00000641115 MECOMQ03112 1051 aa23.82■■□□□ 1.4
PHGDH-210ENST00000641115 NIM1KQ8IY84 436 aa23.82■■□□□ 1.4
PHGDH-210ENST00000641115 NSUN4Q96CB9 384 aaKnown RBP23.82■■□□□ 1.4
PHGDH-210ENST00000641115 USP26Q9BXU7 913 aa23.82■■□□□ 1.4
PHGDH-210ENST00000641115 STRIP1Q5VSL9 837 aa23.81■■□□□ 1.4
PHGDH-210ENST00000641115 CCDC129Q6ZRS4 1044 aa23.81■■□□□ 1.4
PHGDH-210ENST00000641115 TBC1D32Q96NH3 1257 aa23.81■■□□□ 1.4
PHGDH-210ENST00000641115 PUS7LQ9H0K6 701 aaKnown RBP23.81■■□□□ 1.4
PHGDH-210ENST00000641115 USP17L3A6NCW0 530 aa23.81■■□□□ 1.4
PHGDH-210ENST00000641115 USP17L4A6NCW7 530 aa23.81■■□□□ 1.4
PHGDH-210ENST00000641115 USP17L1Q7RTZ2 530 aa23.81■■□□□ 1.4
PHGDH-210ENST00000641115 AIDAQ96BJ3 306 aa23.81■■□□□ 1.4
PHGDH-210ENST00000641115 LSG1Q9H089 658 aaKnown RBP23.81■■□□□ 1.4
PHGDH-210ENST00000641115 SUGT1Q9Y2Z0 365 aa23.81■■□□□ 1.4
PHGDH-210ENST00000641115 MYH2Q9UKX2 1941 aa23.8■■□□□ 1.4
PHGDH-210ENST00000641115 COL4A5P29400 1685 aa23.8■■□□□ 1.4
PHGDH-210ENST00000641115 GSTO1P78417 241 aa23.8■■□□□ 1.4
PHGDH-210ENST00000641115 GPAA1O43292 621 aa23.79■■□□□ 1.4
PHGDH-210ENST00000641115 MCCP23508 829 aa23.79■■□□□ 1.4
PHGDH-210ENST00000641115 FKBP1AP62942 108 aaKnown RBP23.79■■□□□ 1.4
PHGDH-210ENST00000641115 JDP2Q8WYK2 163 aa23.79■■□□□ 1.4
PHGDH-210ENST00000641115 RASSF7Q02833 373 aa23.78■■□□□ 1.4
PHGDH-210ENST00000641115 YDJCA8MPS7 323 aa23.77■■□□□ 1.4
PHGDH-210ENST00000641115 RBM25P49756 843 aaKnown RBP23.77■■□□□ 1.4
PHGDH-210ENST00000641115 PTH1RQ03431 593 aa23.77■■□□□ 1.4
PHGDH-210ENST00000641115 SLF2Q8IX21 1173 aa23.77■■□□□ 1.4
PHGDH-210ENST00000641115 ZNF384Q8TF68 577 aa23.77■■□□□ 1.4
PHGDH-210ENST00000641115 KCNQ5Q9NR82 932 aa23.77■■□□□ 1.4
PHGDH-210ENST00000641115 ZNRF3Q9ULT6 936 aa23.77■■□□□ 1.4
PHGDH-210ENST00000641115 GOLGB1Q14789 3259 aaKnown RBP23.77■■□□□ 1.4
PHGDH-210ENST00000641115 MBD4O95243 580 aa23.77■■□□□ 1.4
PHGDH-210ENST00000641115 LDHCP07864 332 aa23.77■■□□□ 1.4
PHGDH-210ENST00000641115 GRIK5Q16478 980 aa23.77■■□□□ 1.4
PHGDH-210ENST00000641115 DACT2Q5SW24 774 aa23.77■■□□□ 1.4
PHGDH-210ENST00000641115 ARHGAP27Q6ZUM4 889 aa23.77■■□□□ 1.4
PHGDH-210ENST00000641115 ADGRA1Q86SQ6 560 aa23.77■■□□□ 1.4
PHGDH-210ENST00000641115 CERS5Q8N5B7 392 aa23.77■■□□□ 1.4
PHGDH-210ENST00000641115 MIGA1Q8NAN2 632 aa23.77■■□□□ 1.4
PHGDH-210ENST00000641115 RBM19Q9Y4C8 960 aaKnown RBP23.77■■□□□ 1.4
PHGDH-210ENST00000641115 MAGEB6P1A0A0J9YX57 407 aa23.76■■□□□ 1.39
PHGDH-210ENST00000641115 MAP4K1Q92918 833 aa23.75■■□□□ 1.39
PHGDH-210ENST00000641115 DSCC1Q9BVC3 393 aa23.75■■□□□ 1.39
PHGDH-210ENST00000641115 DICER1Q9UPY3 1922 aaKnown RBP23.74■■□□□ 1.39
PHGDH-210ENST00000641115 HSPD1P10809 573 aaKnown RBP23.74■■□□□ 1.39
PHGDH-210ENST00000641115 NOL10Q9BSC4 688 aaKnown RBP23.74■■□□□ 1.39
PHGDH-210ENST00000641115 MXD3Q9BW11 206 aa23.74■■□□□ 1.39
PHGDH-210ENST00000641115 MROH7-TTC4A0A0A0MT08 1334 aa23.74■■□□□ 1.39
PHGDH-210ENST00000641115 MYO3BQ8WXR4 1341 aa23.74■■□□□ 1.39
PHGDH-210ENST00000641115 GNAT2P19087 354 aa23.73■■□□□ 1.39
PHGDH-210ENST00000641115 DIXDC1Q155Q3 683 aa23.73■■□□□ 1.39
PHGDH-210ENST00000641115 STRBPQ96SI9 672 aaKnown RBP23.73■■□□□ 1.39
PHGDH-210ENST00000641115 ARMT1Q9H993 441 aa23.73■■□□□ 1.39
PHGDH-210ENST00000641115 TTF2Q9UNY4 1162 aaKnown RBP23.73■■□□□ 1.39
PHGDH-210ENST00000641115 RBM8AQ9Y5S9 174 aaKnown RBP23.73■■□□□ 1.39
PHGDH-210ENST00000641115 F8W031 263 aaPredicted RBP23.73■■□□□ 1.39
PHGDH-210ENST00000641115 RAD17O75943 681 aa23.73■■□□□ 1.39
PHGDH-210ENST00000641115 HSPA4P34932 840 aa23.73■■□□□ 1.39
PHGDH-210ENST00000641115 VPS53Q5VIR6 699 aa23.73■■□□□ 1.39
PHGDH-210ENST00000641115 LCORLQ8N3X6 602 aa23.73■■□□□ 1.39
PHGDH-210ENST00000641115 U3KPZ7 1027 aaPredicted RBP23.73■■□□□ 1.39
PHGDH-210ENST00000641115 SBF1O95248 1867 aa23.73■■□□□ 1.39
PHGDH-210ENST00000641115 RIOK1Q9BRS2 568 aaKnown RBP23.72■■□□□ 1.39
PHGDH-210ENST00000641115 AATFQ9NY61 560 aaKnown RBP eCLIP23.72■■□□□ 1.39
PHGDH-210ENST00000641115 BAG3O95817 575 aa23.71■■□□□ 1.39
PHGDH-210ENST00000641115 YBX3P16989 372 aaKnown RBP eCLIP23.71■■□□□ 1.392e-7■□□□□ 9.8
PHGDH-210ENST00000641115 PSMD14O00487 310 aa23.7■■□□□ 1.39
PHGDH-210ENST00000641115 APPP05067 770 aa23.7■■□□□ 1.39
PHGDH-210ENST00000641115 LMNB1P20700 586 aa23.7■■□□□ 1.39
PHGDH-210ENST00000641115 RNF20Q5VTR2 975 aa23.7■■□□□ 1.39
PHGDH-210ENST00000641115 RSBN1LQ6PCB5 846 aaPredicted RBP23.7■■□□□ 1.39
PHGDH-210ENST00000641115 CERS3Q8IU89 383 aa23.7■■□□□ 1.39
PHGDH-210ENST00000641115 KIAA0825Q8IV33 1275 aa23.7■■□□□ 1.39
PHGDH-210ENST00000641115 FAM163AQ96GL9 167 aaPredicted RBP23.7■■□□□ 1.39
PHGDH-210ENST00000641115 VIL1P09327 827 aaKnown RBP23.7■■□□□ 1.38
PHGDH-210ENST00000641115 SLC4A4Q9Y6R1 1079 aa23.7■■□□□ 1.38
PHGDH-210ENST00000641115 GAKO14976 1311 aa23.69■■□□□ 1.38
PHGDH-210ENST00000641115 RPAP1Q9BWH6 1393 aaPredicted RBP23.69■■□□□ 1.38
PHGDH-210ENST00000641115 ADAMTSL1Q8N6G6 1762 aa23.69■■□□□ 1.38
PHGDH-210ENST00000641115 PRELPP51888 382 aa23.69■■□□□ 1.38
PHGDH-210ENST00000641115 ANAPC15P60006 121 aa23.69■■□□□ 1.38
PHGDH-210ENST00000641115 DYNLL1P63167 89 aaKnown RBP23.69■■□□□ 1.38
PHGDH-210ENST00000641115 CXCL9Q07325 125 aa23.69■■□□□ 1.38
PHGDH-210ENST00000641115 TNIP1Q15025 636 aa23.69■■□□□ 1.38
PHGDH-210ENST00000641115 NECTIN1Q15223 517 aa23.69■■□□□ 1.38
PHGDH-210ENST00000641115 CIAPIN1Q6FI81 312 aa23.69■■□□□ 1.38
PHGDH-210ENST00000641115 TEKT1Q969V4 418 aa23.69■■□□□ 1.38
PHGDH-210ENST00000641115 CTNNA3Q9UI47 895 aa23.69■■□□□ 1.38
PHGDH-210ENST00000641115 PATL2C9JE40 543 aaKnown RBP23.68■■□□□ 1.38
PHGDH-210ENST00000641115 ZKSCAN1P17029 563 aaPredicted RBP23.68■■□□□ 1.38
PHGDH-210ENST00000641115 BTDP43251 543 aa23.68■■□□□ 1.38
PHGDH-210ENST00000641115 SCNN1DP51172 638 aa23.68■■□□□ 1.38
PHGDH-210ENST00000641115 CRNKL1Q9BZJ0 848 aaKnown RBP23.68■■□□□ 1.38
PHGDH-210ENST00000641115 NACAP1Q9BZK3 213 aa23.68■■□□□ 1.38
PHGDH-210ENST00000641115 TIAM2Q8IVF5 1701 aa23.67■■□□□ 1.38
PHGDH-210ENST00000641115 GPR75-ASB3A0A0A6YYF3 556 aa23.67■■□□□ 1.38
PHGDH-210ENST00000641115 FOXP2O15409 715 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms