RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 IGSF3O75054 1194 aa17.54■□□□□ 0.4
SDHD-209ENST00000640554 CRKP46108 304 aa17.54■□□□□ 0.4
SDHD-209ENST00000640554 RRP1P56182 461 aaKnown RBP17.54■□□□□ 0.4
SDHD-209ENST00000640554 CCDC158Q5M9N0 1113 aa17.54■□□□□ 0.4
SDHD-209ENST00000640554 CDCA5Q96FF9 252 aa17.54■□□□□ 0.4
SDHD-209ENST00000640554 ZNF408Q9H9D4 720 aa17.54■□□□□ 0.4
SDHD-209ENST00000640554 MKRN1Q9UHC7 482 aaKnown RBP17.54■□□□□ 0.4
SDHD-209ENST00000640554 RAB11FIP3O75154 756 aa17.53■□□□□ 0.4
SDHD-209ENST00000640554 LDHBP07195 334 aaKnown RBP17.53■□□□□ 0.4
SDHD-209ENST00000640554 SLF2Q8IX21 1173 aa17.53■□□□□ 0.4
SDHD-209ENST00000640554 ZNF512BQ96KM6 892 aaPredicted RBP17.53■□□□□ 0.4
SDHD-209ENST00000640554 ZDHHC15Q96MV8 337 aa17.53■□□□□ 0.4
SDHD-209ENST00000640554 COL1A1P02452 1464 aaPredicted RBP17.52■□□□□ 0.4
SDHD-209ENST00000640554 ARID4AP29374 1257 aaPredicted RBP17.52■□□□□ 0.4
SDHD-209ENST00000640554 SPDYE2Q495Y8 402 aa17.52■□□□□ 0.4
SDHD-209ENST00000640554 KIF1BPQ96EK5 621 aa17.52■□□□□ 0.4
SDHD-209ENST00000640554 DEFB129Q9H1M3 183 aa17.52■□□□□ 0.4
SDHD-209ENST00000640554 TNNI2P48788 182 aa17.51■□□□□ 0.39
SDHD-209ENST00000640554 VEGFBP49765 207 aa17.51■□□□□ 0.39
SDHD-209ENST00000640554 HUNKP57058 714 aa17.51■□□□□ 0.39
SDHD-209ENST00000640554 AAMPQ13685 434 aa17.51■□□□□ 0.39
SDHD-209ENST00000640554 RASGRF1Q13972 1273 aa17.51■□□□□ 0.39
SDHD-209ENST00000640554 SUPT20HL1Q3ZLR7 823 aa17.51■□□□□ 0.39
SDHD-209ENST00000640554 FKBP1CQ5VVH2 108 aa17.51■□□□□ 0.39
SDHD-209ENST00000640554 ZNF70Q9UC06 446 aaPredicted RBP17.51■□□□□ 0.39
SDHD-209ENST00000640554 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.51■□□□□ 0.39
SDHD-209ENST00000640554 ZNF646O15015 1829 aaPredicted RBP17.51■□□□□ 0.39
SDHD-209ENST00000640554 GRIK5Q16478 980 aa17.5■□□□□ 0.39
SDHD-209ENST00000640554 SIRT2Q8IXJ6 389 aa17.5■□□□□ 0.39
SDHD-209ENST00000640554 SPATA5Q8NB90 893 aa17.5■□□□□ 0.39
SDHD-209ENST00000640554 CCDC102AQ96A19 550 aa17.5■□□□□ 0.39
SDHD-209ENST00000640554 TMOD2Q9NZR1 351 aa17.5■□□□□ 0.39
SDHD-209ENST00000640554 EXOC6BQ9Y2D4 811 aa17.5■□□□□ 0.39
SDHD-209ENST00000640554 WDR33Q9C0J8 1336 aaKnown RBP17.49■□□□□ 0.39
SDHD-209ENST00000640554 MAP2K2P36507 400 aa17.49■□□□□ 0.39
SDHD-209ENST00000640554 TTC39AQ5SRH9 613 aa17.49■□□□□ 0.39
SDHD-209ENST00000640554 APOBEC3HQ6NTF7 200 aaKnown RBP17.49■□□□□ 0.39
SDHD-209ENST00000640554 CLASRPQ8N2M8 674 aaKnown RBP17.49■□□□□ 0.39
SDHD-209ENST00000640554 RHPN1Q8TCX5 695 aa17.49■□□□□ 0.39
SDHD-209ENST00000640554 FAM163AQ96GL9 167 aaPredicted RBP17.49■□□□□ 0.39
SDHD-209ENST00000640554 CAPNS2Q96L46 248 aa17.49■□□□□ 0.39
SDHD-209ENST00000640554 TDRD3Q9H7E2 651 aaKnown RBP17.49■□□□□ 0.39
SDHD-209ENST00000640554 VEZTQ9HBM0 779 aa17.49■□□□□ 0.39
SDHD-209ENST00000640554 HMG20BQ9P0W2 317 aa17.49■□□□□ 0.39
SDHD-209ENST00000640554 CLRN2A0PK11 232 aa17.48■□□□□ 0.39
SDHD-209ENST00000640554 UNCXA6NJT0 531 aa17.48■□□□□ 0.39
SDHD-209ENST00000640554 LDHCP07864 332 aa17.48■□□□□ 0.39
SDHD-209ENST00000640554 PRDX5P30044 214 aa17.48■□□□□ 0.39
SDHD-209ENST00000640554 RGMBQ6NW40 437 aa17.48■□□□□ 0.39
SDHD-209ENST00000640554 DLK2Q6UY11 383 aa17.48■□□□□ 0.39
SDHD-209ENST00000640554 PAXIP1Q6ZW49 1069 aaPredicted RBP17.48■□□□□ 0.39
SDHD-209ENST00000640554 ERICH6Q7L0X2 663 aa17.48■□□□□ 0.39
SDHD-209ENST00000640554 ARMC9Q7Z3E5 817 aa17.48■□□□□ 0.39
SDHD-209ENST00000640554 EAF2Q96CJ1 260 aaPredicted RBP17.48■□□□□ 0.39
SDHD-209ENST00000640554 DBNDD2Q9BQY9 259 aa17.48■□□□□ 0.39
SDHD-209ENST00000640554 ABCF2Q9UG63 623 aa17.48■□□□□ 0.39
SDHD-209ENST00000640554 PCDHAC2Q9Y5I4 1007 aa17.48■□□□□ 0.39
SDHD-209ENST00000640554 PPP1R12BO60237 982 aaPredicted RBP17.47■□□□□ 0.39
SDHD-209ENST00000640554 GSTO1P78417 241 aa17.47■□□□□ 0.39
SDHD-209ENST00000640554 MAP2K1Q02750 393 aaPredicted RBP17.47■□□□□ 0.39
SDHD-209ENST00000640554 RASA3Q14644 834 aa17.47■□□□□ 0.39
SDHD-209ENST00000640554 FAM83AQ86UY5 434 aa17.47■□□□□ 0.39
SDHD-209ENST00000640554 DZIP1Q86YF9 867 aaKnown RBP17.47■□□□□ 0.39
SDHD-209ENST00000640554 HOOK2Q96ED9 719 aa17.47■□□□□ 0.39
SDHD-209ENST00000640554 MAP4K4O95819 1239 aaPredicted RBP17.46■□□□□ 0.39
SDHD-209ENST00000640554 NOGQ13253 232 aa17.46■□□□□ 0.39
SDHD-209ENST00000640554 TMED8Q6PL24 325 aaPredicted RBP17.46■□□□□ 0.39
SDHD-209ENST00000640554 AACSQ86V21 672 aa17.46■□□□□ 0.39
SDHD-209ENST00000640554 DBNLQ9UJU6 430 aaKnown RBP17.46■□□□□ 0.39
SDHD-209ENST00000640554 TRPM7Q96QT4 1865 aa17.46■□□□□ 0.38
SDHD-209ENST00000640554 MCAMP43121 646 aa17.45■□□□□ 0.38
SDHD-209ENST00000640554 TTLL12Q14166 644 aaPredicted RBP17.45■□□□□ 0.38
SDHD-209ENST00000640554 PRAMEF18Q5VWM3 479 aa17.45■□□□□ 0.38
SDHD-209ENST00000640554 CYP4F22Q6NT55 531 aa17.45■□□□□ 0.38
SDHD-209ENST00000640554 REM2Q8IYK8 340 aaPredicted RBP17.45■□□□□ 0.38
SDHD-209ENST00000640554 CCDC8Q9H0W5 538 aaPredicted RBP17.45■□□□□ 0.38
SDHD-209ENST00000640554 DAGLAQ9Y4D2 1042 aa17.45■□□□□ 0.38
SDHD-209ENST00000640554 IFIT2P09913 472 aaKnown RBP17.44■□□□□ 0.38
SDHD-209ENST00000640554 ZNF157P51786 506 aaPredicted RBP17.44■□□□□ 0.38
SDHD-209ENST00000640554 DIXDC1Q155Q3 683 aa17.44■□□□□ 0.38
SDHD-209ENST00000640554 MAP3K11Q16584 847 aa17.44■□□□□ 0.38
SDHD-209ENST00000640554 DCTPP1Q9H773 170 aa17.44■□□□□ 0.38
SDHD-209ENST00000640554 LRP2BPQ9P2M1 347 aa17.44■□□□□ 0.38
SDHD-209ENST00000640554 SCAF8Q9UPN6 1271 aaKnown RBP17.44■□□□□ 0.38
SDHD-209ENST00000640554 GAKO14976 1311 aa17.44■□□□□ 0.38
SDHD-209ENST00000640554 ARAP2Q8WZ64 1704 aa17.44■□□□□ 0.38
SDHD-209ENST00000640554 TCP10L2B9ZVM9 353 aa17.43■□□□□ 0.38
SDHD-209ENST00000640554 LRRCC1Q9C099 1032 aa17.43■□□□□ 0.38
SDHD-209ENST00000640554 IL1RAPL2Q9NP60 686 aa17.43■□□□□ 0.38
SDHD-209ENST00000640554 IREB2P48200 963 aaKnown RBP17.42■□□□□ 0.38
SDHD-209ENST00000640554 MECOMQ03112 1051 aa17.42■□□□□ 0.38
SDHD-209ENST00000640554 LDLRAD1Q5T700 205 aa17.42■□□□□ 0.38
SDHD-209ENST00000640554 CDC42EP5Q6NZY7 148 aa17.42■□□□□ 0.38
SDHD-209ENST00000640554 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.42■□□□□ 0.38
SDHD-209ENST00000640554 AIDAQ96BJ3 306 aa17.42■□□□□ 0.38
SDHD-209ENST00000640554 NSUN4Q96CB9 384 aaKnown RBP17.42■□□□□ 0.38
SDHD-209ENST00000640554 BEGAINQ9BUH8 593 aa17.42■□□□□ 0.38
SDHD-209ENST00000640554 USP40Q9NVE5 1235 aa17.42■□□□□ 0.38
SDHD-209ENST00000640554 WBP1LQ9NX94 342 aa17.42■□□□□ 0.38
SDHD-209ENST00000640554 RAI14Q9P0K7 980 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms