RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ZGPATQ8N5A5 531 aaKnown RBP16.1■□□□□ 0.17
GTF3A-209ENST00000640289 GPATCH3Q96I76 525 aa16.1■□□□□ 0.17
GTF3A-209ENST00000640289 PPP4R2Q9NY27 417 aa16.1■□□□□ 0.17
GTF3A-209ENST00000640289 SUGT1Q9Y2Z0 365 aa16.1■□□□□ 0.17
GTF3A-209ENST00000640289 SCN4AP35499 1836 aa16.1■□□□□ 0.17
GTF3A-209ENST00000640289 GOLIM4O00461 696 aa16.09■□□□□ 0.17
GTF3A-209ENST00000640289 PDE4AP27815 886 aa16.09■□□□□ 0.17
GTF3A-209ENST00000640289 DIXDC1Q155Q3 683 aa16.09■□□□□ 0.17
GTF3A-209ENST00000640289 CFAP100Q494V2 611 aa16.09■□□□□ 0.17
GTF3A-209ENST00000640289 ERICH6Q7L0X2 663 aa16.09■□□□□ 0.17
GTF3A-209ENST00000640289 PNMA8AQ86V59 439 aaPredicted RBP16.09■□□□□ 0.17
GTF3A-209ENST00000640289 PI4K2BQ8TCG2 481 aa16.09■□□□□ 0.17
GTF3A-209ENST00000640289 HAUS7Q99871 368 aa16.09■□□□□ 0.17
GTF3A-209ENST00000640289 RAI14Q9P0K7 980 aa16.09■□□□□ 0.17
GTF3A-209ENST00000640289 LRP2BPQ9P2M1 347 aa16.09■□□□□ 0.17
GTF3A-209ENST00000640289 TTC41PQ6P2S7 1318 aa16.09■□□□□ 0.17
GTF3A-209ENST00000640289 MYH13Q9UKX3 1938 aa16.08■□□□□ 0.16
GTF3A-209ENST00000640289 CRKP46108 304 aa16.08■□□□□ 0.16
GTF3A-209ENST00000640289 RBM5P52756 815 aaKnown RBP eCLIP16.08■□□□□ 0.16
GTF3A-209ENST00000640289 PDE1AP54750 535 aa16.08■□□□□ 0.16
GTF3A-209ENST00000640289 NBPF9Q3BBW0 867 aa16.08■□□□□ 0.16
GTF3A-209ENST00000640289 SPTY2D1Q68D10 685 aaPredicted RBP16.08■□□□□ 0.16
GTF3A-209ENST00000640289 PLEKHM2Q8IWE5 1019 aa16.08■□□□□ 0.16
GTF3A-209ENST00000640289 ZNF384Q8TF68 577 aa16.08■□□□□ 0.16
GTF3A-209ENST00000640289 ZBED3Q96IU2 234 aaPredicted RBP16.08■□□□□ 0.16
GTF3A-209ENST00000640289 STAP2Q9UGK3 403 aa16.08■□□□□ 0.16
GTF3A-209ENST00000640289 CLEC11AQ9Y240 323 aa16.08■□□□□ 0.16
GTF3A-209ENST00000640289 ASTN2O75129 1339 aaPredicted RBP16.08■□□□□ 0.16
GTF3A-209ENST00000640289 AOX1Q06278 1338 aa16.08■□□□□ 0.16
GTF3A-209ENST00000640289 AKAP11Q9UKA4 1901 aa16.07■□□□□ 0.16
GTF3A-209ENST00000640289 WNT10BO00744 389 aa16.07■□□□□ 0.16
GTF3A-209ENST00000640289 MAP4K4O95819 1239 aaPredicted RBP16.07■□□□□ 0.16
GTF3A-209ENST00000640289 MECOMQ03112 1051 aa16.07■□□□□ 0.16
GTF3A-209ENST00000640289 DLGAP5Q15398 846 aa16.07■□□□□ 0.16
GTF3A-209ENST00000640289 DZIP1Q86YF9 867 aaKnown RBP16.07■□□□□ 0.16
GTF3A-209ENST00000640289 NSUN4Q96CB9 384 aaKnown RBP16.07■□□□□ 0.16
GTF3A-209ENST00000640289 PAG1Q9NWQ8 432 aa16.07■□□□□ 0.16
GTF3A-209ENST00000640289 SERPINA10Q9UK55 444 aa16.07■□□□□ 0.16
GTF3A-209ENST00000640289 MAST3O60307 1309 aa16.07■□□□□ 0.16
GTF3A-209ENST00000640289 SPDYE2BA6NHP3 402 aa16.06■□□□□ 0.16
GTF3A-209ENST00000640289 ERC2O15083 957 aa16.06■□□□□ 0.16
GTF3A-209ENST00000640289 IDH1O75874 414 aaKnown RBP16.06■□□□□ 0.16
GTF3A-209ENST00000640289 GLRX3O76003 335 aaKnown RBP16.06■□□□□ 0.16
GTF3A-209ENST00000640289 SPDYE6P0CI01 402 aa16.06■□□□□ 0.16
GTF3A-209ENST00000640289 MMP14P50281 582 aa16.06■□□□□ 0.16
GTF3A-209ENST00000640289 SKAP1Q86WV1 359 aa16.06■□□□□ 0.16
GTF3A-209ENST00000640289 MTMR14Q8NCE2 650 aa16.06■□□□□ 0.16
GTF3A-209ENST00000640289 TEKT1Q969V4 418 aa16.06■□□□□ 0.16
GTF3A-209ENST00000640289 PRMT6Q96LA8 375 aaPredicted RBP16.06■□□□□ 0.16
GTF3A-209ENST00000640289 HDLBPQ00341 1268 aaKnown RBP16.05■□□□□ 0.16
GTF3A-209ENST00000640289 TTF1Q15361 905 aaPredicted RBP16.05■□□□□ 0.16
GTF3A-209ENST00000640289 MAP1SQ66K74 1059 aaPredicted RBP16.05■□□□□ 0.16
GTF3A-209ENST00000640289 HHIPL2Q6UWX4 724 aa16.05■□□□□ 0.16
GTF3A-209ENST00000640289 LDHDQ86WU2 507 aa16.05■□□□□ 0.16
GTF3A-209ENST00000640289 MRIQ9BWK5 157 aa16.05■□□□□ 0.16
GTF3A-209ENST00000640289 GGA3Q9NZ52 723 aa16.05■□□□□ 0.16
GTF3A-209ENST00000640289 SCAF8Q9UPN6 1271 aaKnown RBP16.05■□□□□ 0.16
GTF3A-209ENST00000640289 DAGLAQ9Y4D2 1042 aa16.05■□□□□ 0.16
GTF3A-209ENST00000640289 ADAMTSL1Q8N6G6 1762 aa16.05■□□□□ 0.16
GTF3A-209ENST00000640289 TOMM70O94826 608 aa16.04■□□□□ 0.16
GTF3A-209ENST00000640289 ANGEL2Q5VTE6 544 aaKnown RBP16.04■□□□□ 0.16
GTF3A-209ENST00000640289 APOBEC3HQ6NTF7 200 aaKnown RBP16.04■□□□□ 0.16
GTF3A-209ENST00000640289 TDRD3Q9H7E2 651 aaKnown RBP16.04■□□□□ 0.16
GTF3A-209ENST00000640289 MROH7-TTC4A0A0A0MT08 1334 aa16.03■□□□□ 0.16
GTF3A-209ENST00000640289 CLRN2A0PK11 232 aa16.03■□□□□ 0.16
GTF3A-209ENST00000640289 NAA16Q6N069 864 aaPredicted RBP16.03■□□□□ 0.16
GTF3A-209ENST00000640289 CHADLQ6NUI6 762 aa16.03■□□□□ 0.16
GTF3A-209ENST00000640289 ADGRA1Q86SQ6 560 aa16.03■□□□□ 0.16
GTF3A-209ENST00000640289 MAGEB6Q8N7X4 407 aa16.03■□□□□ 0.16
GTF3A-209ENST00000640289 ZDHHC15Q96MV8 337 aa16.03■□□□□ 0.16
GTF3A-209ENST00000640289 OSBPL3Q9H4L5 887 aa16.03■□□□□ 0.16
GTF3A-209ENST00000640289 PGAP2Q9UHJ9 254 aa16.03■□□□□ 0.16
GTF3A-209ENST00000640289 GAKO14976 1311 aa16.02■□□□□ 0.16
GTF3A-209ENST00000640289 CHGBP05060 677 aa16.02■□□□□ 0.16
GTF3A-209ENST00000640289 BTDP43251 543 aa16.02■□□□□ 0.16
GTF3A-209ENST00000640289 MAP3K12Q12852 859 aa16.02■□□□□ 0.16
GTF3A-209ENST00000640289 SLFNL1Q499Z3 407 aa16.02■□□□□ 0.16
GTF3A-209ENST00000640289 DLK2Q6UY11 383 aa16.02■□□□□ 0.16
GTF3A-209ENST00000640289 RBM46Q8TBY0 533 aaKnown RBP16.02■□□□□ 0.16
GTF3A-209ENST00000640289 ZC3H15Q8WU90 426 aaKnown RBP16.02■□□□□ 0.16
GTF3A-209ENST00000640289 FAM163AQ96GL9 167 aaPredicted RBP16.02■□□□□ 0.16
GTF3A-209ENST00000640289 LDHCP07864 332 aa16.01■□□□□ 0.15
GTF3A-209ENST00000640289 PDE6AP16499 860 aa16.01■□□□□ 0.15
GTF3A-209ENST00000640289 CYP7A1P22680 504 aa16.01■□□□□ 0.15
GTF3A-209ENST00000640289 CACNB3P54284 484 aa16.01■□□□□ 0.15
GTF3A-209ENST00000640289 GSTO1P78417 241 aa16.01■□□□□ 0.15
GTF3A-209ENST00000640289 SLC9C2Q5TAH2 1124 aa16.01■□□□□ 0.15
GTF3A-209ENST00000640289 SLF2Q8IX21 1173 aa16.01■□□□□ 0.15
GTF3A-209ENST00000640289 KBTBD3Q8NAB2 608 aa16.01■□□□□ 0.15
GTF3A-209ENST00000640289 SMC1BQ8NDV3 1235 aa16.01■□□□□ 0.15
GTF3A-209ENST00000640289 DCPSQ96C86 337 aaKnown RBP16.01■□□□□ 0.15
GTF3A-209ENST00000640289 GLIS2Q9BZE0 524 aaPredicted RBP16.01■□□□□ 0.15
GTF3A-209ENST00000640289 VEZTQ9HBM0 779 aa16.01■□□□□ 0.15
GTF3A-209ENST00000640289 ZNF70Q9UC06 446 aaPredicted RBP16.01■□□□□ 0.15
GTF3A-209ENST00000640289 GPR75-ASB3A0A0A6YYF3 556 aa16■□□□□ 0.15
GTF3A-209ENST00000640289 ADM5C9JUS6 153 aa16■□□□□ 0.15
GTF3A-209ENST00000640289 MYO1BO43795 1136 aa16■□□□□ 0.15
GTF3A-209ENST00000640289 FMR1Q06787 632 aaKnown RBP eCLIP16■□□□□ 0.15
GTF3A-209ENST00000640289 SPDYE2Q495Y8 402 aa16■□□□□ 0.15
GTF3A-209ENST00000640289 CDC42EP5Q6NZY7 148 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms