RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 GIPC2Q8TF65 315 aa11.04□□□□□ -0.64
LINC01108-202ENST00000635227 FAM161BQ96MY7 647 aa11.04□□□□□ -0.64
LINC01108-202ENST00000635227 C12orf49Q9H741 205 aa11.04□□□□□ -0.64
LINC01108-202ENST00000635227 KCNK4Q9NYG8 393 aa11.04□□□□□ -0.64
LINC01108-202ENST00000635227 DDX3YO15523 660 aaKnown RBP11.03□□□□□ -0.64
LINC01108-202ENST00000635227 ITGB2P05107 769 aa11.03□□□□□ -0.64
LINC01108-202ENST00000635227 PTPN12Q05209 780 aaKnown RBP11.03□□□□□ -0.64
LINC01108-202ENST00000635227 KLHL23Q8NBE8 558 aa11.03□□□□□ -0.64
LINC01108-202ENST00000635227 C3orf58Q8NDZ4 430 aa11.03□□□□□ -0.64
LINC01108-202ENST00000635227 WNT8BQ93098 351 aa11.03□□□□□ -0.64
LINC01108-202ENST00000635227 GIPC1O14908 333 aa11.02□□□□□ -0.65
LINC01108-202ENST00000635227 ADAM11O75078 769 aa11.02□□□□□ -0.65
LINC01108-202ENST00000635227 APBA3O96018 575 aa11.02□□□□□ -0.65
LINC01108-202ENST00000635227 CD68P34810 354 aaPredicted RBP11.02□□□□□ -0.65
LINC01108-202ENST00000635227 C19orf57Q0VDD7 668 aa11.02□□□□□ -0.65
LINC01108-202ENST00000635227 FAAP100Q0VG06 881 aa11.02□□□□□ -0.65
LINC01108-202ENST00000635227 IGF2-ASQ6U949 168 aa11.02□□□□□ -0.65
LINC01108-202ENST00000635227 CD163Q86VB7 1156 aa11.02□□□□□ -0.65
LINC01108-202ENST00000635227 SRCIN1Q9C0H9 1055 aa11.02□□□□□ -0.65
LINC01108-202ENST00000635227 OSGEPQ9NPF4 335 aa11.02□□□□□ -0.65
LINC01108-202ENST00000635227 C1QTNF9BB2RNN3 333 aa11.01□□□□□ -0.65
LINC01108-202ENST00000635227 PLA2G4EQ3MJ16 856 aa11.01□□□□□ -0.65
LINC01108-202ENST00000635227 LENG1Q96BZ8 264 aaPredicted RBP11.01□□□□□ -0.65
LINC01108-202ENST00000635227 FRMD6Q96NE9 622 aa11.01□□□□□ -0.65
LINC01108-202ENST00000635227 AKAP2Q9Y2D5 859 aa11.01□□□□□ -0.65
LINC01108-202ENST00000635227 SYNJ1O43426 1573 aa11.01□□□□□ -0.65
LINC01108-202ENST00000635227 GSTT1P30711 240 aa11□□□□□ -0.65
LINC01108-202ENST00000635227 ARL4DP49703 201 aa11□□□□□ -0.65
LINC01108-202ENST00000635227 NLRP12P59046 1061 aa11□□□□□ -0.65
LINC01108-202ENST00000635227 DAB2P98082 770 aa11□□□□□ -0.65
LINC01108-202ENST00000635227 SUZ12Q15022 739 aaKnown RBP11□□□□□ -0.65
LINC01108-202ENST00000635227 FOXD4L4Q8WXT5 416 aaPredicted RBP11□□□□□ -0.65
LINC01108-202ENST00000635227 PODXL2Q9NZ53 605 aa11□□□□□ -0.65
LINC01108-202ENST00000635227 AK5Q9Y6K8 562 aa11□□□□□ -0.65
LINC01108-202ENST00000635227 WISP1O95388 367 aa10.99□□□□□ -0.65
LINC01108-202ENST00000635227 B3GALT4O96024 378 aa10.99□□□□□ -0.65
LINC01108-202ENST00000635227 USP17L7P0C7H9 530 aa10.99□□□□□ -0.65
LINC01108-202ENST00000635227 XRCC5P13010 732 aaKnown RBP10.99□□□□□ -0.65
LINC01108-202ENST00000635227 EIF4BP23588 611 aaKnown RBP10.99□□□□□ -0.65
LINC01108-202ENST00000635227 ZNF157P51786 506 aaPredicted RBP10.99□□□□□ -0.65
LINC01108-202ENST00000635227 XPCQ01831 940 aaPredicted RBP10.99□□□□□ -0.65
LINC01108-202ENST00000635227 GSTM4Q03013 218 aa10.99□□□□□ -0.65
LINC01108-202ENST00000635227 PSMD2Q13200 908 aa10.99□□□□□ -0.65
LINC01108-202ENST00000635227 RPS26P11Q5JNZ5 115 aaPredicted RBP10.99□□□□□ -0.65
LINC01108-202ENST00000635227 NACC1Q96RE7 527 aa10.99□□□□□ -0.65
LINC01108-202ENST00000635227 SOX17Q9H6I2 414 aaPredicted RBP10.99□□□□□ -0.65
LINC01108-202ENST00000635227 FAM8A1Q9UBU6 413 aa10.99□□□□□ -0.65
LINC01108-202ENST00000635227 USP21Q9UK80 565 aa10.99□□□□□ -0.65
LINC01108-202ENST00000635227 WRNQ14191 1432 aaPredicted RBP eCLIP10.99□□□□□ -0.65
LINC01108-202ENST00000635227 AQRO60306 1485 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC01108-202ENST00000635227 ABCC10Q5T3U5 1492 aa10.99□□□□□ -0.65
LINC01108-202ENST00000635227 C9orf172C9J069 976 aa10.98□□□□□ -0.65
LINC01108-202ENST00000635227 TMC4Q7Z404 712 aa10.98□□□□□ -0.65
LINC01108-202ENST00000635227 RGS22Q8NE09 1264 aa10.98□□□□□ -0.65
LINC01108-202ENST00000635227 DCAF11Q8TEB1 546 aa10.98□□□□□ -0.65
LINC01108-202ENST00000635227 CCDC9Q9Y3X0 531 aaKnown RBP10.98□□□□□ -0.65
LINC01108-202ENST00000635227 BIVM-ERCC5R4GMW8 1640 aa10.98□□□□□ -0.65
LINC01108-202ENST00000635227 ZNF16P17020 682 aaPredicted RBP10.97□□□□□ -0.65
LINC01108-202ENST00000635227 UBASH3BQ8TF42 649 aa10.97□□□□□ -0.65
LINC01108-202ENST00000635227 TSPOAP1O95153 1857 aa10.96□□□□□ -0.65
LINC01108-202ENST00000635227 ZNF326Q5BKZ1 582 aaKnown RBP10.96□□□□□ -0.65
LINC01108-202ENST00000635227 MRPL18Q9H0U6 180 aaKnown RBP10.96□□□□□ -0.65
LINC01108-202ENST00000635227 ZFYVE1Q9HBF4 777 aa10.96□□□□□ -0.65
LINC01108-202ENST00000635227 FBXO24O75426 580 aa10.95□□□□□ -0.66
LINC01108-202ENST00000635227 ADGRE1Q14246 886 aa10.95□□□□□ -0.66
LINC01108-202ENST00000635227 MBTPS1Q14703 1052 aa10.95□□□□□ -0.66
LINC01108-202ENST00000635227 TRIM56Q9BRZ2 755 aaKnown RBP10.95□□□□□ -0.66
LINC01108-202ENST00000635227 NRSN2Q9GZP1 204 aa10.95□□□□□ -0.66
LINC01108-202ENST00000635227 GPN3Q9UHW5 284 aaPredicted RBP10.95□□□□□ -0.66
LINC01108-202ENST00000635227 DIP2BQ9P265 1576 aa10.94□□□□□ -0.66
LINC01108-202ENST00000635227 LOC105371045A0A1W2PR82 267 aa10.94□□□□□ -0.66
LINC01108-202ENST00000635227 ALX3O95076 343 aa10.94□□□□□ -0.66
LINC01108-202ENST00000635227 NRG1Q02297 640 aaPredicted RBP10.94□□□□□ -0.66
LINC01108-202ENST00000635227 DUOXA2Q1HG44 320 aa10.94□□□□□ -0.66
LINC01108-202ENST00000635227 TPTE2Q6XPS3 522 aa10.94□□□□□ -0.66
LINC01108-202ENST00000635227 ACAD11Q709F0 780 aa10.94□□□□□ -0.66
LINC01108-202ENST00000635227 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.94□□□□□ -0.66
LINC01108-202ENST00000635227 AGGF1Q8N302 714 aaeCLIP10.94□□□□□ -0.66
LINC01108-202ENST00000635227 USP26Q9BXU7 913 aa10.94□□□□□ -0.66
LINC01108-202ENST00000635227 TOP2BQ02880 1626 aa10.94□□□□□ -0.66
LINC01108-202ENST00000635227 F8W735 103 aaPredicted RBP10.93□□□□□ -0.66
LINC01108-202ENST00000635227 CTSHP09668 335 aa10.93□□□□□ -0.66
LINC01108-202ENST00000635227 KIAA1211Q6ZU35 1233 aa10.93□□□□□ -0.66
LINC01108-202ENST00000635227 RBM47A0AV96 593 aaKnown RBP10.92□□□□□ -0.66
LINC01108-202ENST00000635227 SORBS3O60504 671 aa10.92□□□□□ -0.66
LINC01108-202ENST00000635227 ECEL1O95672 775 aa10.92□□□□□ -0.66
LINC01108-202ENST00000635227 DLGAP3O95886 979 aa10.92□□□□□ -0.66
LINC01108-202ENST00000635227 TMEM130Q8N3G9 435 aa10.92□□□□□ -0.66
LINC01108-202ENST00000635227 WFDC12Q8WWY7 111 aa10.92□□□□□ -0.66
LINC01108-202ENST00000635227 MRS2Q9HD23 443 aa10.92□□□□□ -0.66
LINC01108-202ENST00000635227 TMEM39AQ9NV64 488 aa10.92□□□□□ -0.66
LINC01108-202ENST00000635227 PPM1HQ9ULR3 514 aa10.92□□□□□ -0.66
LINC01108-202ENST00000635227 KIF21BO75037 1637 aa10.91□□□□□ -0.66
LINC01108-202ENST00000635227 LOC100289279A0A1B0GTE1 492 aa10.91□□□□□ -0.66
LINC01108-202ENST00000635227 CTSBP07858 339 aa10.91□□□□□ -0.66
LINC01108-202ENST00000635227 NOS3P29474 1203 aa10.91□□□□□ -0.66
LINC01108-202ENST00000635227 IREB2P48200 963 aaKnown RBP10.91□□□□□ -0.66
LINC01108-202ENST00000635227 MEI1Q5TIA1 1274 aa10.91□□□□□ -0.66
LINC01108-202ENST00000635227 GPAT2Q6NUI2 795 aa10.91□□□□□ -0.66
LINC01108-202ENST00000635227 FAM9AQ8IZU1 332 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms