RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 JAG2Q9Y219 1238 aa17.17■□□□□ 0.34
SNRPA1-216ENST00000626000 NF2P35240 595 aa17.16■□□□□ 0.34
SNRPA1-216ENST00000626000 NBPF9Q3BBW0 867 aa17.16■□□□□ 0.34
SNRPA1-216ENST00000626000 SPATA5Q8NB90 893 aa17.16■□□□□ 0.34
SNRPA1-216ENST00000626000 TMOD2Q9NZR1 351 aa17.16■□□□□ 0.34
SNRPA1-216ENST00000626000 CRKP46108 304 aa17.15■□□□□ 0.34
SNRPA1-216ENST00000626000 FKBP1BP68106 108 aa17.15■□□□□ 0.34
SNRPA1-216ENST00000626000 USP48Q86UV5 1035 aa17.15■□□□□ 0.34
SNRPA1-216ENST00000626000 AACSQ86V21 672 aa17.15■□□□□ 0.34
SNRPA1-216ENST00000626000 ZDHHC15Q96MV8 337 aa17.15■□□□□ 0.34
SNRPA1-216ENST00000626000 LRRCC1Q9C099 1032 aa17.15■□□□□ 0.34
SNRPA1-216ENST00000626000 IFIT2P09913 472 aaKnown RBP17.14■□□□□ 0.33
SNRPA1-216ENST00000626000 TNNI2P48788 182 aa17.14■□□□□ 0.33
SNRPA1-216ENST00000626000 GSTO1P78417 241 aa17.14■□□□□ 0.33
SNRPA1-216ENST00000626000 DZIP1Q86YF9 867 aaKnown RBP17.14■□□□□ 0.33
SNRPA1-216ENST00000626000 HHIPL1Q96JK4 782 aa17.14■□□□□ 0.33
SNRPA1-216ENST00000626000 CRBNQ96SW2 442 aa17.14■□□□□ 0.33
SNRPA1-216ENST00000626000 DBNDD2Q9BQY9 259 aa17.14■□□□□ 0.33
SNRPA1-216ENST00000626000 POLR2AP24928 1970 aaKnown RBP17.13■□□□□ 0.33
SNRPA1-216ENST00000626000 CELF2O95319 508 aaKnown RBP17.13■□□□□ 0.33
SNRPA1-216ENST00000626000 SPDYE2Q495Y8 402 aa17.13■□□□□ 0.33
SNRPA1-216ENST00000626000 FKBP1CQ5VVH2 108 aa17.13■□□□□ 0.33
SNRPA1-216ENST00000626000 PPP4R3CPQ6ZMV5 832 aa17.13■□□□□ 0.33
SNRPA1-216ENST00000626000 ERICH6Q7L0X2 663 aa17.13■□□□□ 0.33
SNRPA1-216ENST00000626000 EAF2Q96CJ1 260 aaPredicted RBP17.13■□□□□ 0.33
SNRPA1-216ENST00000626000 DCTPP1Q9H773 170 aa17.13■□□□□ 0.33
SNRPA1-216ENST00000626000 HMG20BQ9P0W2 317 aa17.13■□□□□ 0.33
SNRPA1-216ENST00000626000 DBNLQ9UJU6 430 aaKnown RBP17.13■□□□□ 0.33
SNRPA1-216ENST00000626000 ABT1Q9ULW3 272 aaKnown RBP17.13■□□□□ 0.33
SNRPA1-216ENST00000626000 TRAF5O00463 557 aa17.12■□□□□ 0.33
SNRPA1-216ENST00000626000 MAP4K4O95819 1239 aaPredicted RBP17.12■□□□□ 0.33
SNRPA1-216ENST00000626000 LDHCP07864 332 aa17.12■□□□□ 0.33
SNRPA1-216ENST00000626000 C2orf69Q8N8R5 385 aa17.12■□□□□ 0.33
SNRPA1-216ENST00000626000 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNRPA1-216ENST00000626000 PRMT6Q96LA8 375 aaPredicted RBP17.12■□□□□ 0.33
SNRPA1-216ENST00000626000 ZBTB47Q9UFB7 747 aaPredicted RBP17.12■□□□□ 0.33
SNRPA1-216ENST00000626000 ABCF2Q9UG63 623 aa17.12■□□□□ 0.33
SNRPA1-216ENST00000626000 RASSF10A6NK89 507 aa17.11■□□□□ 0.33
SNRPA1-216ENST00000626000 ADM5C9JUS6 153 aa17.11■□□□□ 0.33
SNRPA1-216ENST00000626000 PRDX5P30044 214 aa17.11■□□□□ 0.33
SNRPA1-216ENST00000626000 ECE1P42892 770 aa17.11■□□□□ 0.33
SNRPA1-216ENST00000626000 SUPT20HL1Q3ZLR7 823 aa17.11■□□□□ 0.33
SNRPA1-216ENST00000626000 KLRG1Q96E93 195 aa17.11■□□□□ 0.33
SNRPA1-216ENST00000626000 HOOK2Q96ED9 719 aa17.11■□□□□ 0.33
SNRPA1-216ENST00000626000 CDCA5Q96FF9 252 aa17.11■□□□□ 0.33
SNRPA1-216ENST00000626000 GPATCH3Q96I76 525 aa17.11■□□□□ 0.33
SNRPA1-216ENST00000626000 IL1RAPL2Q9NP60 686 aa17.11■□□□□ 0.33
SNRPA1-216ENST00000626000 SUPT16HQ9Y5B9 1047 aaKnown RBP17.11■□□□□ 0.33
SNRPA1-216ENST00000626000 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.11■□□□□ 0.33
SNRPA1-216ENST00000626000 PAPPA2Q9BXP8 1791 aa17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 MCAMP43121 646 aa17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 HDAC1Q13547 482 aaPredicted RBP17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 TTF1Q15361 905 aaPredicted RBP17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 CERS3Q8IU89 383 aa17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 GCC1Q96CN9 775 aa17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 FAM163AQ96GL9 167 aaPredicted RBP17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 CCDC8Q9H0W5 538 aaPredicted RBP17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 DEFB129Q9H1M3 183 aa17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 ZNF408Q9H9D4 720 aa17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 VEZTQ9HBM0 779 aa17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 GBA2Q9HCG7 927 aaPredicted RBP17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 LRP2BPQ9P2M1 347 aa17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 TLL2Q9Y6L7 1015 aa17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 ASTN2O75129 1339 aaPredicted RBP17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 CNTNAP1P78357 1384 aa17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 MAST2Q6P0Q8 1798 aa17.1■□□□□ 0.33
SNRPA1-216ENST00000626000 CST9Q5W186 159 aa17.09■□□□□ 0.33
SNRPA1-216ENST00000626000 FAM83AQ86UY5 434 aa17.09■□□□□ 0.33
SNRPA1-216ENST00000626000 ZNF70Q9UC06 446 aaPredicted RBP17.09■□□□□ 0.33
SNRPA1-216ENST00000626000 GAKO14976 1311 aa17.09■□□□□ 0.33
SNRPA1-216ENST00000626000 UNCXA6NJT0 531 aa17.08■□□□□ 0.32
SNRPA1-216ENST00000626000 APBB1O00213 710 aa17.08■□□□□ 0.32
SNRPA1-216ENST00000626000 DEFB115Q30KQ5 88 aa17.08■□□□□ 0.32
SNRPA1-216ENST00000626000 SAPCD2Q86UD0 394 aa17.08■□□□□ 0.32
SNRPA1-216ENST00000626000 DNAJC5GQ8N7S2 189 aa17.08■□□□□ 0.32
SNRPA1-216ENST00000626000 NOL10Q9BSC4 688 aaKnown RBP17.08■□□□□ 0.32
SNRPA1-216ENST00000626000 TDRD3Q9H7E2 651 aaKnown RBP17.08■□□□□ 0.32
SNRPA1-216ENST00000626000 DAGLAQ9Y4D2 1042 aa17.08■□□□□ 0.32
SNRPA1-216ENST00000626000 PCDHB15Q9Y5E8 787 aa17.08■□□□□ 0.32
SNRPA1-216ENST00000626000 AKAP11Q9UKA4 1901 aa17.08■□□□□ 0.32
SNRPA1-216ENST00000626000 MYH2Q9UKX2 1941 aa17.08■□□□□ 0.32
SNRPA1-216ENST00000626000 RPAP1Q9BWH6 1393 aaPredicted RBP17.07■□□□□ 0.32
SNRPA1-216ENST00000626000 CLRN2A0PK11 232 aa17.07■□□□□ 0.32
SNRPA1-216ENST00000626000 GRIK5Q16478 980 aa17.07■□□□□ 0.32
SNRPA1-216ENST00000626000 APOBEC3HQ6NTF7 200 aaKnown RBP17.07■□□□□ 0.32
SNRPA1-216ENST00000626000 ARMC9Q7Z3E5 817 aa17.07■□□□□ 0.32
SNRPA1-216ENST00000626000 RWDD1Q9H446 243 aaPredicted RBP17.07■□□□□ 0.32
SNRPA1-216ENST00000626000 TLR7Q9NYK1 1049 aaKnown RBP17.07■□□□□ 0.32
SNRPA1-216ENST00000626000 RAI14Q9P0K7 980 aa17.07■□□□□ 0.32
SNRPA1-216ENST00000626000 MROH7-TTC4A0A0A0MT08 1334 aa17.06■□□□□ 0.32
SNRPA1-216ENST00000626000 PPP1R12BO60237 982 aaPredicted RBP17.06■□□□□ 0.32
SNRPA1-216ENST00000626000 BAG3O95817 575 aa17.06■□□□□ 0.32
SNRPA1-216ENST00000626000 PLCG2P16885 1265 aa17.06■□□□□ 0.32
SNRPA1-216ENST00000626000 MECOMQ03112 1051 aa17.06■□□□□ 0.32
SNRPA1-216ENST00000626000 MAP3K12Q12852 859 aa17.06■□□□□ 0.32
SNRPA1-216ENST00000626000 RASA3Q14644 834 aa17.06■□□□□ 0.32
SNRPA1-216ENST00000626000 ATP5JP18859 108 aa17.05■□□□□ 0.32
SNRPA1-216ENST00000626000 HUNKP57058 714 aa17.05■□□□□ 0.32
SNRPA1-216ENST00000626000 DIXDC1Q155Q3 683 aa17.05■□□□□ 0.32
SNRPA1-216ENST00000626000 IFFO2Q5TF58 517 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms