RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ZBTB22O15209 634 aa25.46■■□□□ 1.67
SPAST-204ENST00000621856 GNAT2P19087 354 aa25.46■■□□□ 1.67
SPAST-204ENST00000621856 TOB2Q14106 344 aaPredicted RBP25.46■■□□□ 1.67
SPAST-204ENST00000621856 NAA16Q6N069 864 aaPredicted RBP25.46■■□□□ 1.67
SPAST-204ENST00000621856 DHX32Q7L7V1 743 aaKnown RBP25.46■■□□□ 1.67
SPAST-204ENST00000621856 TNPO1Q92973 898 aaKnown RBP25.46■■□□□ 1.67
SPAST-204ENST00000621856 ALDH1B1P30837 517 aa25.46■■□□□ 1.67
SPAST-204ENST00000621856 FGD1P98174 961 aa25.46■■□□□ 1.67
SPAST-204ENST00000621856 Q6ZUG5 572 aa25.46■■□□□ 1.67
SPAST-204ENST00000621856 LCORLQ8N3X6 602 aa25.46■■□□□ 1.67
SPAST-204ENST00000621856 MASTLQ96GX5 879 aa25.46■■□□□ 1.67
SPAST-204ENST00000621856 TPCN1Q9ULQ1 816 aa25.46■■□□□ 1.67
SPAST-204ENST00000621856 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.46■■□□□ 1.67
SPAST-204ENST00000621856 MAGEB6P1A0A0J9YX57 407 aa25.45■■□□□ 1.66
SPAST-204ENST00000621856 ALX1Q15699 326 aa25.45■■□□□ 1.66
SPAST-204ENST00000621856 CCDC83Q8IWF9 413 aa25.45■■□□□ 1.66
SPAST-204ENST00000621856 ATP6V0A2Q9Y487 856 aa25.45■■□□□ 1.66
SPAST-204ENST00000621856 MAST2Q6P0Q8 1798 aa25.45■■□□□ 1.66
SPAST-204ENST00000621856 CCDC88AQ3V6T2 1871 aa25.45■■□□□ 1.66
SPAST-204ENST00000621856 C6orf229H3BNL8 230 aa25.44■■□□□ 1.66
SPAST-204ENST00000621856 ME3Q16798 604 aa25.44■■□□□ 1.66
SPAST-204ENST00000621856 TDRD7Q8NHU6 1098 aaKnown RBP25.44■■□□□ 1.66
SPAST-204ENST00000621856 TBC1D16Q8TBP0 767 aa25.44■■□□□ 1.66
SPAST-204ENST00000621856 JAG2Q9Y219 1238 aa25.44■■□□□ 1.66
SPAST-204ENST00000621856 SLC4A4Q9Y6R1 1079 aa25.44■■□□□ 1.66
SPAST-204ENST00000621856 SPTY2D1Q68D10 685 aaPredicted RBP25.43■■□□□ 1.66
SPAST-204ENST00000621856 ADGRA1Q86SQ6 560 aa25.43■■□□□ 1.66
SPAST-204ENST00000621856 NAPBQ9H115 298 aa25.43■■□□□ 1.66
SPAST-204ENST00000621856 ZMYM6O95789 1325 aa25.43■■□□□ 1.66
SPAST-204ENST00000621856 C2CD5Q86YS7 1000 aa25.43■■□□□ 1.66
SPAST-204ENST00000621856 IFNL3Q8IZI9 196 aa25.43■■□□□ 1.66
SPAST-204ENST00000621856 WDR66Q8TBY9 1149 aa25.43■■□□□ 1.66
SPAST-204ENST00000621856 ZNF622Q969S3 477 aaKnown RBP eCLIP25.43■■□□□ 1.66
SPAST-204ENST00000621856 NACAP1Q9BZK3 213 aa25.43■■□□□ 1.66
SPAST-204ENST00000621856 POLLQ9UGP5 575 aa25.43■■□□□ 1.66
SPAST-204ENST00000621856 LTBP1Q14766 1721 aa25.43■■□□□ 1.66
SPAST-204ENST00000621856 MECOMQ03112 1051 aa25.42■■□□□ 1.66
SPAST-204ENST00000621856 GBP4Q96PP9 640 aa25.42■■□□□ 1.66
SPAST-204ENST00000621856 LRRC2Q9BYS8 371 aa25.42■■□□□ 1.66
SPAST-204ENST00000621856 TMX4Q9H1E5 349 aaPredicted RBP25.42■■□□□ 1.66
SPAST-204ENST00000621856 EPB41L4AQ9HCS5 686 aaPredicted RBP25.42■■□□□ 1.66
SPAST-204ENST00000621856 GSG1L2A8MUP6 293 aa25.41■■□□□ 1.66
SPAST-204ENST00000621856 PRKAB2O43741 272 aa25.41■■□□□ 1.66
SPAST-204ENST00000621856 EXOSC10Q01780 885 aaKnown RBP25.41■■□□□ 1.66
SPAST-204ENST00000621856 RALYLQ86SE5 291 aaKnown RBP25.41■■□□□ 1.66
SPAST-204ENST00000621856 NECAB1Q8N987 351 aa25.41■■□□□ 1.66
SPAST-204ENST00000621856 NSUN4Q96CB9 384 aaKnown RBP25.41■■□□□ 1.66
SPAST-204ENST00000621856 SMC3Q9UQE7 1217 aa25.41■■□□□ 1.66
SPAST-204ENST00000621856 H0YIN7 160 aa25.4■■□□□ 1.66
SPAST-204ENST00000621856 PRDX5P30044 214 aa25.4■■□□□ 1.66
SPAST-204ENST00000621856 MCM4P33991 863 aa25.4■■□□□ 1.66
SPAST-204ENST00000621856 TDO2P48775 406 aa25.4■■□□□ 1.66
SPAST-204ENST00000621856 PKP1Q13835 747 aa25.4■■□□□ 1.66
SPAST-204ENST00000621856 NCOA7Q8NI08 942 aa25.4■■□□□ 1.66
SPAST-204ENST00000621856 CD209Q9NNX6 404 aa25.4■■□□□ 1.66
SPAST-204ENST00000621856 SALL1Q9NSC2 1324 aa25.4■■□□□ 1.66
SPAST-204ENST00000621856 DZIP1Q86YF9 867 aaKnown RBP25.4■■□□□ 1.66
SPAST-204ENST00000621856 BRF1Q92994 677 aa25.4■■□□□ 1.66
SPAST-204ENST00000621856 TRDNQ13061 729 aa25.39■■□□□ 1.65
SPAST-204ENST00000621856 ZNF384Q8TF68 577 aa25.39■■□□□ 1.65
SPAST-204ENST00000621856 DYNLL1P63167 89 aaKnown RBP25.38■■□□□ 1.65
SPAST-204ENST00000621856 TMED8Q6PL24 325 aaPredicted RBP25.38■■□□□ 1.65
SPAST-204ENST00000621856 TBC1D10CQ8IV04 446 aa25.38■■□□□ 1.65
SPAST-204ENST00000621856 MPNDQ8N594 471 aa25.38■■□□□ 1.65
SPAST-204ENST00000621856 RIOK1Q9BRS2 568 aaKnown RBP25.38■■□□□ 1.65
SPAST-204ENST00000621856 NBPF3Q9H094 633 aa25.38■■□□□ 1.65
SPAST-204ENST00000621856 CHD4Q14839 1912 aa25.38■■□□□ 1.65
SPAST-204ENST00000621856 LDHBP07195 334 aaKnown RBP25.37■■□□□ 1.65
SPAST-204ENST00000621856 MCM5P33992 734 aa25.37■■□□□ 1.65
SPAST-204ENST00000621856 ST3GAL1Q11201 340 aa25.37■■□□□ 1.65
SPAST-204ENST00000621856 STK3Q13188 491 aa25.37■■□□□ 1.65
SPAST-204ENST00000621856 STYK1Q6J9G0 422 aa25.37■■□□□ 1.65
SPAST-204ENST00000621856 CHST3Q7LGC8 479 aa25.37■■□□□ 1.65
SPAST-204ENST00000621856 IL1R1P14778 569 aa25.37■■□□□ 1.65
SPAST-204ENST00000621856 DPP8Q6V1X1 898 aaPredicted RBP25.37■■□□□ 1.65
SPAST-204ENST00000621856 MB21D2Q8IYB1 491 aaPredicted RBP25.37■■□□□ 1.65
SPAST-204ENST00000621856 DUOX1Q9NRD9 1551 aa25.36■■□□□ 1.65
SPAST-204ENST00000621856 IGSF3O75054 1194 aa25.36■■□□□ 1.65
SPAST-204ENST00000621856 OLFM4Q6UX06 510 aa25.36■■□□□ 1.65
SPAST-204ENST00000621856 KIAA1551Q9HCM1 1747 aa25.35■■□□□ 1.65
SPAST-204ENST00000621856 RIMBP2O15034 1052 aa25.35■■□□□ 1.65
SPAST-204ENST00000621856 PRC1O43663 620 aa25.35■■□□□ 1.65
SPAST-204ENST00000621856 SDR42E1Q8WUS8 393 aa25.35■■□□□ 1.65
SPAST-204ENST00000621856 AGXT2Q9BYV1 514 aa25.35■■□□□ 1.65
SPAST-204ENST00000621856 PDGFDQ9GZP0 370 aaPredicted RBP25.35■■□□□ 1.65
SPAST-204ENST00000621856 ZDHHC9Q9Y397 364 aa25.35■■□□□ 1.65
SPAST-204ENST00000621856 DDX11L8A8MPP1 907 aa25.34■■□□□ 1.65
SPAST-204ENST00000621856 GJB2P29033 226 aa25.34■■□□□ 1.65
SPAST-204ENST00000621856 APOBRQ0VD83 1088 aa25.34■■□□□ 1.65
SPAST-204ENST00000621856 TIAM2Q8IVF5 1701 aa25.34■■□□□ 1.65
SPAST-204ENST00000621856 CTDSPL2Q05D32 466 aa25.34■■□□□ 1.65
SPAST-204ENST00000621856 FOXD4L5Q5VV16 416 aaPredicted RBP25.34■■□□□ 1.65
SPAST-204ENST00000621856 FOXD4L4Q8WXT5 416 aaPredicted RBP25.34■■□□□ 1.65
SPAST-204ENST00000621856 AATFQ9NY61 560 aaKnown RBP eCLIP25.34■■□□□ 1.65
SPAST-204ENST00000621856 BRD1O95696 1058 aa25.33■■□□□ 1.65
SPAST-204ENST00000621856 CHRNA5P30532 468 aa25.33■■□□□ 1.65
SPAST-204ENST00000621856 GSTO1P78417 241 aa25.33■■□□□ 1.65
SPAST-204ENST00000621856 ZC3H12CQ9C0D7 883 aaKnown RBP25.33■■□□□ 1.65
SPAST-204ENST00000621856 NAP1L2Q9ULW6 460 aaPredicted RBP25.33■■□□□ 1.65
SPAST-204ENST00000621856 WDR19Q8NEZ3 1342 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms