RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 PRR20EP86478 221 aa9.4□□□□□ -0.9
SCAMP1-206ENST00000618166 PRR20CP86479 221 aa9.4□□□□□ -0.9
SCAMP1-206ENST00000618166 PRR20DP86480 221 aa9.4□□□□□ -0.9
SCAMP1-206ENST00000618166 PRR20BP86481 221 aa9.4□□□□□ -0.9
SCAMP1-206ENST00000618166 PRR20AP86496 221 aa9.4□□□□□ -0.9
SCAMP1-206ENST00000618166 NEUROD1Q13562 356 aa9.4□□□□□ -0.9
SCAMP1-206ENST00000618166 SP8Q8IXZ3 490 aa9.4□□□□□ -0.9
SCAMP1-206ENST00000618166 WNK4Q96J92 1243 aa9.4□□□□□ -0.9
SCAMP1-206ENST00000618166 FMNL2Q96PY5 1086 aa9.4□□□□□ -0.9
SCAMP1-206ENST00000618166 NYXQ9GZU5 481 aa9.4□□□□□ -0.9
SCAMP1-206ENST00000618166 CCL5P13501 91 aa9.39□□□□□ -0.91
SCAMP1-206ENST00000618166 INHBEP58166 350 aa9.39□□□□□ -0.91
SCAMP1-206ENST00000618166 PDIA6Q15084 440 aa9.39□□□□□ -0.91
SCAMP1-206ENST00000618166 WASHC4Q2M389 1173 aa9.39□□□□□ -0.91
SCAMP1-206ENST00000618166 NBPF9Q3BBW0 867 aa9.39□□□□□ -0.91
SCAMP1-206ENST00000618166 ALYREFQ86V81 257 aaKnown RBP9.39□□□□□ -0.91
SCAMP1-206ENST00000618166 C7orf61Q8IZ16 206 aa9.39□□□□□ -0.91
SCAMP1-206ENST00000618166 CDX2Q99626 313 aaPredicted RBP9.39□□□□□ -0.91
SCAMP1-206ENST00000618166 ANGEL1Q9UNK9 670 aaKnown RBP9.39□□□□□ -0.91
SCAMP1-206ENST00000618166 NTSR2O95665 410 aa9.38□□□□□ -0.91
SCAMP1-206ENST00000618166 GJB1P08034 283 aa9.38□□□□□ -0.91
SCAMP1-206ENST00000618166 VIL1P09327 827 aaKnown RBP9.38□□□□□ -0.91
SCAMP1-206ENST00000618166 NUDT18Q6ZVK8 323 aa9.38□□□□□ -0.91
SCAMP1-206ENST00000618166 MYOZ2Q9NPC6 264 aa9.38□□□□□ -0.91
SCAMP1-206ENST00000618166 ZNF646O15015 1829 aaPredicted RBP9.38□□□□□ -0.91
SCAMP1-206ENST00000618166 ALPK3Q96L96 1907 aa9.38□□□□□ -0.91
SCAMP1-206ENST00000618166 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 SLC24A1O60721 1099 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 HMOX1P09601 288 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 ARMC9Q7Z3E5 817 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 ZNF598Q86UK7 904 aaKnown RBP9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 NGEFQ8N5V2 710 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 IL17REQ8NFR9 667 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 U2AF1L4Q8WU68 220 aaKnown RBP9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 SLC10A4Q96EP9 437 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 RNF208Q9H0X6 261 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 POLLQ9UGP5 575 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 SCN9AQ15858 1988 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 TAF1P21675 1872 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 SSC5DA1L4H1 1573 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 ZBTB48P10074 688 aaPredicted RBP9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 CTGFP29279 349 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 IL13P35225 146 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 NF2P35240 595 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 FAM109BQ6ICB4 259 aaPredicted RBP9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 DIS3LQ8TF46 1054 aaKnown RBP9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 MYLIPQ8WY64 445 aa9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 UBE2OQ9C0C9 1292 aaKnown RBP9.37□□□□□ -0.91
SCAMP1-206ENST00000618166 BBOX1O75936 387 aa9.36□□□□□ -0.91
SCAMP1-206ENST00000618166 TEFQ10587 303 aa9.36□□□□□ -0.91
SCAMP1-206ENST00000618166 USP38Q8NB14 1042 aa9.36□□□□□ -0.91
SCAMP1-206ENST00000618166 NLRP3Q96P20 1036 aa9.36□□□□□ -0.91
SCAMP1-206ENST00000618166 UNC93B1Q9H1C4 597 aa9.36□□□□□ -0.91
SCAMP1-206ENST00000618166 COL4A1P02462 1669 aa9.35□□□□□ -0.91
SCAMP1-206ENST00000618166 C6orf229H3BNL8 230 aa9.35□□□□□ -0.91
SCAMP1-206ENST00000618166 RSBN1LQ6PCB5 846 aaPredicted RBP9.35□□□□□ -0.91
SCAMP1-206ENST00000618166 TTLL7Q6ZT98 887 aa9.35□□□□□ -0.91
SCAMP1-206ENST00000618166 PAWRQ96IZ0 340 aaKnown RBP9.35□□□□□ -0.91
SCAMP1-206ENST00000618166 GMLQ99445 158 aa9.35□□□□□ -0.91
SCAMP1-206ENST00000618166 IBTKQ9P2D0 1353 aaPredicted RBP9.35□□□□□ -0.91
SCAMP1-206ENST00000618166 SIPA1L3O60292 1781 aaPredicted RBP9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 LAMB1P07942 1786 aa9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 TESPA1A2RU30 521 aaPredicted RBP9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 SPDYE16A6NNV3 312 aaPredicted RBP9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 USP17L8P0C7I0 530 aa9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 GRK4P32298 578 aa9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 GPSM2P81274 684 aa9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 LACTBP83111 547 aaPredicted RBP9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 ARHGEF6Q15052 776 aa9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 TAF1CQ15572 869 aaPredicted RBP9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 SWT1Q5T5J6 900 aaKnown RBP9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 OTUD7BQ6GQQ9 843 aa9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 SLF2Q8IX21 1173 aa9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 ZBTB3Q9H5J0 574 aa9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 NSFL1CQ9UNZ2 370 aaKnown RBP9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 RIPOR2Q9Y4F9 1068 aa9.34□□□□□ -0.91
SCAMP1-206ENST00000618166 LRRC37AA6NMS7 1700 aa9.33□□□□□ -0.92
SCAMP1-206ENST00000618166 COL2A1P02458 1487 aaPredicted RBP9.33□□□□□ -0.92
SCAMP1-206ENST00000618166 SASH1O94885 1247 aa9.33□□□□□ -0.92
SCAMP1-206ENST00000618166 SGPL1O95470 568 aa9.33□□□□□ -0.92
SCAMP1-206ENST00000618166 HCLS1P14317 486 aaPredicted RBP9.33□□□□□ -0.92
SCAMP1-206ENST00000618166 GRAPQ13588 217 aa9.33□□□□□ -0.92
SCAMP1-206ENST00000618166 ZNF697Q5TEC3 545 aa9.33□□□□□ -0.92
SCAMP1-206ENST00000618166 FAM43AQ8N2R8 423 aa9.33□□□□□ -0.92
SCAMP1-206ENST00000618166 GRAPLQ8TC17 118 aaPredicted RBP9.33□□□□□ -0.92
SCAMP1-206ENST00000618166 BRI3BPQ8WY22 251 aa9.33□□□□□ -0.92
SCAMP1-206ENST00000618166 MXD3Q9BW11 206 aa9.33□□□□□ -0.92
SCAMP1-206ENST00000618166 BDP1A6H8Y1 2624 aa9.33□□□□□ -0.92
SCAMP1-206ENST00000618166 PIEZO1Q92508 2521 aa9.33□□□□□ -0.92
SCAMP1-206ENST00000618166 BTBD11A6QL63 1104 aa9.32□□□□□ -0.92
SCAMP1-206ENST00000618166 WNT10BO00744 389 aa9.32□□□□□ -0.92
SCAMP1-206ENST00000618166 ZNF34Q8IZ26 560 aa9.32□□□□□ -0.92
SCAMP1-206ENST00000618166 AGBL3Q8NEM8 1001 aa9.32□□□□□ -0.92
SCAMP1-206ENST00000618166 ZFYVE28Q9HCC9 887 aa9.32□□□□□ -0.92
SCAMP1-206ENST00000618166 BIN2Q9UBW5 565 aaPredicted RBP9.32□□□□□ -0.92
SCAMP1-206ENST00000618166 LAMB2P55268 1798 aa9.32□□□□□ -0.92
SCAMP1-206ENST00000618166 MAP3K15Q6ZN16 1313 aa9.32□□□□□ -0.92
SCAMP1-206ENST00000618166 DDX60Q8IY21 1712 aaKnown RBP9.31□□□□□ -0.92
SCAMP1-206ENST00000618166 FAM187AA6NFU0 413 aa9.31□□□□□ -0.92
SCAMP1-206ENST00000618166 GDF9O60383 454 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms