RNA–Protein interactions for RNA: ENST00000612570.4

NDFIP2-205, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-205ENST00000612570 CDC37L1Q7L3B6 337 aa16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 LLPHQ9BRT6 129 aaKnown RBP16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 ARMT1Q9H993 441 aa16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 PCCAP05165 728 aaPredicted RBP16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 ST5P78524 1137 aa16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 CACNA2D4Q7Z3S7 1137 aa16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 KIF5CO60282 957 aa16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 TDRD12Q587J7 1177 aaKnown RBP16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 MAP4K1Q92918 833 aa16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 DSCC1Q9BVC3 393 aa16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 PUS3Q9BZE2 481 aaKnown RBP16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 ANGEL1Q9UNK9 670 aaKnown RBP16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 ZKSCAN5Q9Y2L8 839 aa16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 SASH1O94885 1247 aa16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 PPP4R3BQ5MIZ7 849 aa16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 TAF4BQ92750 862 aa16.5■□□□□ 0.23
NDFIP2-205ENST00000612570 ZSCAN12O43309 604 aa16.49■□□□□ 0.23
NDFIP2-205ENST00000612570 CTSWP56202 376 aa16.49■□□□□ 0.23
NDFIP2-205ENST00000612570 CCDC113Q9H0I3 377 aa16.49■□□□□ 0.23
NDFIP2-205ENST00000612570 TPCN1Q9ULQ1 816 aa16.49■□□□□ 0.23
NDFIP2-205ENST00000612570 E7EWF7 191 aa16.49■□□□□ 0.23
NDFIP2-205ENST00000612570 OTUD7BQ6GQQ9 843 aa16.49■□□□□ 0.23
NDFIP2-205ENST00000612570 BRAPQ7Z569 592 aa16.49■□□□□ 0.23
NDFIP2-205ENST00000612570 MCM9Q9NXL9 1143 aa16.49■□□□□ 0.23
NDFIP2-205ENST00000612570 MYO3AQ8NEV4 1616 aa16.49■□□□□ 0.23
NDFIP2-205ENST00000612570 GSTO1P78417 241 aa16.49■□□□□ 0.23
NDFIP2-205ENST00000612570 SPA17Q15506 151 aa16.49■□□□□ 0.23
NDFIP2-205ENST00000612570 CGNQ9P2M7 1197 aaKnown RBP16.49■□□□□ 0.23
NDFIP2-205ENST00000612570 PRKCSHP14314 528 aaPredicted RBP16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 UBA7P41226 1012 aa16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 PI4K2BQ8TCG2 481 aa16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 ZNF532Q9HCE3 1301 aa16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 TSPY3P0CV98 308 aa16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 TSPY8P0CW00 308 aa16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 JAKMIP3Q5VZ66 844 aa16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 CDC42BPGQ6DT37 1551 aa16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 IGKV5-2P06315 115 aa16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 GTF2F1P35269 517 aaKnown RBP eCLIP16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 PTPN12Q05209 780 aaKnown RBP16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 SEPT7Q16181 437 aaKnown RBP16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 BRINP3Q76B58 766 aa16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 OVOS2A0A0J9YW53 1432 aa16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 OVOS2Q6IE36 1432 aa16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 SPATA31A3Q5VYP0 1347 aa16.48■□□□□ 0.23
NDFIP2-205ENST00000612570 MACROD2A1Z1Q3 448 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 NEMFO60524 1076 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 IGSF3O75054 1194 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 MATR3P43243 847 aaKnown RBP eCLIP16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 IQSEC2Q5JU85 1478 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 GSDMDP57764 484 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 GNG11P61952 73 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 GIGYF2Q6Y7W6 1299 aaKnown RBP16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 CCDC24Q8N4L8 307 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 TMEM87BQ96K49 555 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 RGS12O14924 1447 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 HSPD1P10809 573 aaKnown RBP16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 LUZP1Q86V48 1076 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 AOPEPQ8N6M6 819 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 LEO1Q8WVC0 666 aaPredicted RBP16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 ANKRD2Q9GZV1 360 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 CCNL1Q9UK58 526 aaPredicted RBP16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 ZBTB1Q9Y2K1 713 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 A0A1B0GVL5 298 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 CHMP4BP1P59074 171 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 KANK3Q6NY19 840 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 SPATA5Q8NB90 893 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 MAP3K15Q6ZN16 1313 aa16.47■□□□□ 0.23
NDFIP2-205ENST00000612570 CASQ1P31415 396 aa16.46■□□□□ 0.23
NDFIP2-205ENST00000612570 ATL3Q6DD88 541 aa16.46■□□□□ 0.23
NDFIP2-205ENST00000612570 ZNF622Q969S3 477 aaKnown RBP eCLIP16.46■□□□□ 0.234e-6■□□□□ 11.1
NDFIP2-205ENST00000612570 DENND2AQ9ULE3 1009 aa16.46■□□□□ 0.23
NDFIP2-205ENST00000612570 MROH5Q6ZUA9 1318 aa16.46■□□□□ 0.23
NDFIP2-205ENST00000612570 TRIM75PA6NK02 468 aa16.46■□□□□ 0.23
NDFIP2-205ENST00000612570 F8W031 263 aaPredicted RBP16.46■□□□□ 0.23
NDFIP2-205ENST00000612570 CCDC148Q8NFR7 591 aa16.46■□□□□ 0.23
NDFIP2-205ENST00000612570 CCDC12Q8WUD4 166 aaPredicted RBP16.46■□□□□ 0.23
NDFIP2-205ENST00000612570 GTF3C6Q969F1 213 aa16.46■□□□□ 0.23
NDFIP2-205ENST00000612570 HEG1Q9ULI3 1381 aa16.46■□□□□ 0.23
NDFIP2-205ENST00000612570 CRB1P82279 1406 aa16.46■□□□□ 0.23
NDFIP2-205ENST00000612570 KIF2AO00139 706 aaPredicted RBP16.46■□□□□ 0.23
NDFIP2-205ENST00000612570 GREM2Q9H772 168 aa16.46■□□□□ 0.23
NDFIP2-205ENST00000612570 TCP11L1Q9NUJ3 509 aa16.46■□□□□ 0.23
NDFIP2-205ENST00000612570 MTMR6Q9Y217 621 aa16.46■□□□□ 0.23
NDFIP2-205ENST00000612570 AFMP43652 599 aa16.46■□□□□ 0.22
NDFIP2-205ENST00000612570 ZNF589Q86UQ0 364 aaPredicted RBP16.46■□□□□ 0.22
NDFIP2-205ENST00000612570 ZNF335Q9H4Z2 1342 aaPredicted RBP16.45■□□□□ 0.22
NDFIP2-205ENST00000612570 TCERG1LQ5VWI1 586 aa16.45■□□□□ 0.22
NDFIP2-205ENST00000612570 ZNF804AQ7Z570 1209 aa16.45■□□□□ 0.22
NDFIP2-205ENST00000612570 ZNF397Q8NF99 534 aaPredicted RBP16.45■□□□□ 0.22
NDFIP2-205ENST00000612570 FRMPD1Q5SYB0 1578 aa16.45■□□□□ 0.22
NDFIP2-205ENST00000612570 LIG1P18858 919 aa16.45■□□□□ 0.22
NDFIP2-205ENST00000612570 SNW1Q13573 536 aaKnown RBP16.45■□□□□ 0.22
NDFIP2-205ENST00000612570 EPHA10Q5JZY3 1008 aa16.45■□□□□ 0.22
NDFIP2-205ENST00000612570 PRDM1O75626 825 aa16.45■□□□□ 0.22
NDFIP2-205ENST00000612570 LMOD1P29536 600 aaPredicted RBP16.45■□□□□ 0.22
NDFIP2-205ENST00000612570 MTIF2P46199 727 aaKnown RBP16.45■□□□□ 0.22
NDFIP2-205ENST00000612570 MTX1Q13505 466 aa16.45■□□□□ 0.22
NDFIP2-205ENST00000612570 CUL4AQ13619 759 aa16.45■□□□□ 0.22
NDFIP2-205ENST00000612570 HS1BP3Q53T59 392 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms