RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 FBXW7Q969H0 707 aa25.83■■□□□ 1.73
SHANK2-220ENST00000608988 NEUROD6Q96NK8 337 aa25.83■■□□□ 1.73
SHANK2-220ENST00000608988 HPSEQ9Y251 543 aa25.83■■□□□ 1.73
SHANK2-220ENST00000608988 TRPM3Q9HCF6 1732 aaPredicted RBP25.83■■□□□ 1.73
SHANK2-220ENST00000608988 TRIM65Q6PJ69 517 aa25.83■■□□□ 1.72
SHANK2-220ENST00000608988 VSTM4Q8IW00 320 aa25.83■■□□□ 1.72
SHANK2-220ENST00000608988 MB21D2Q8IYB1 491 aaPredicted RBP25.83■■□□□ 1.72
SHANK2-220ENST00000608988 TTC5Q8N0Z6 440 aa25.83■■□□□ 1.72
SHANK2-220ENST00000608988 UBASH3AP57075 661 aa25.82■■□□□ 1.72
SHANK2-220ENST00000608988 GOLGA8BA8MQT2 603 aa25.81■■□□□ 1.72
SHANK2-220ENST00000608988 CPLX1O14810 134 aa25.81■■□□□ 1.72
SHANK2-220ENST00000608988 ARHGAP6O43182 974 aa25.81■■□□□ 1.72
SHANK2-220ENST00000608988 PRC1O43663 620 aa25.81■■□□□ 1.72
SHANK2-220ENST00000608988 TATP17735 454 aaPredicted RBP25.81■■□□□ 1.72
SHANK2-220ENST00000608988 SYKP43405 635 aa25.81■■□□□ 1.72
SHANK2-220ENST00000608988 HSD3B7Q9H2F3 369 aa25.81■■□□□ 1.72
SHANK2-220ENST00000608988 HPS5Q9UPZ3 1129 aa25.81■■□□□ 1.72
SHANK2-220ENST00000608988 MAP3K15Q6ZN16 1313 aa25.81■■□□□ 1.72
SHANK2-220ENST00000608988 KLF18A0A0U1RQI7 1052 aa25.81■■□□□ 1.72
SHANK2-220ENST00000608988 M0R2C6 588 aa25.81■■□□□ 1.72
SHANK2-220ENST00000608988 EYA2O00167 538 aa25.81■■□□□ 1.72
SHANK2-220ENST00000608988 POLR3DP05423 398 aaPredicted RBP25.81■■□□□ 1.72
SHANK2-220ENST00000608988 C4AP0C0L4 1744 aa25.8■■□□□ 1.72
SHANK2-220ENST00000608988 C4BP0C0L5 1744 aa25.8■■□□□ 1.72
SHANK2-220ENST00000608988 NWD2Q9ULI1 1742 aa25.8■■□□□ 1.72
SHANK2-220ENST00000608988 LMOD1P29536 600 aaPredicted RBP25.8■■□□□ 1.72
SHANK2-220ENST00000608988 OLFM4Q6UX06 510 aa25.8■■□□□ 1.72
SHANK2-220ENST00000608988 REXO1L1PQ8IX06 675 aa25.8■■□□□ 1.72
SHANK2-220ENST00000608988 IFNL2Q8IZJ0 200 aa25.8■■□□□ 1.72
SHANK2-220ENST00000608988 NFATC2IPQ8NCF5 419 aa25.8■■□□□ 1.72
SHANK2-220ENST00000608988 NCOA7Q8NI08 942 aa25.8■■□□□ 1.72
SHANK2-220ENST00000608988 CPDO75976 1380 aa25.8■■□□□ 1.72
SHANK2-220ENST00000608988 BIN1O00499 593 aa25.79■■□□□ 1.72
SHANK2-220ENST00000608988 CDKL5O76039 1030 aa25.79■■□□□ 1.72
SHANK2-220ENST00000608988 PLA2G4AP47712 749 aa25.79■■□□□ 1.72
SHANK2-220ENST00000608988 FBXO3Q9UK99 471 aa25.79■■□□□ 1.72
SHANK2-220ENST00000608988 SERPINC1P01008 464 aa25.79■■□□□ 1.72
SHANK2-220ENST00000608988 DCAF5Q96JK2 942 aa25.79■■□□□ 1.72
SHANK2-220ENST00000608988 UBXN6Q9BZV1 441 aa25.79■■□□□ 1.72
SHANK2-220ENST00000608988 TOP1P11387 765 aaKnown RBP25.78■■□□□ 1.72
SHANK2-220ENST00000608988 CHST3Q7LGC8 479 aa25.78■■□□□ 1.72
SHANK2-220ENST00000608988 A0A0G2JLW4 131 aa25.77■■□□□ 1.72
SHANK2-220ENST00000608988 GPR161Q8N6U8 529 aaKnown RBP25.77■■□□□ 1.72
SHANK2-220ENST00000608988 LRRN4CLQ8ND94 238 aa25.77■■□□□ 1.72
SHANK2-220ENST00000608988 OSBP2Q969R2 916 aa25.77■■□□□ 1.72
SHANK2-220ENST00000608988 CWC25Q9NXE8 425 aaPredicted RBP25.77■■□□□ 1.72
SHANK2-220ENST00000608988 AXIN2Q9Y2T1 843 aa25.77■■□□□ 1.72
SHANK2-220ENST00000608988 PARP3Q9Y6F1 533 aa25.77■■□□□ 1.72
SHANK2-220ENST00000608988 TJP1Q07157 1748 aa25.77■■□□□ 1.72
SHANK2-220ENST00000608988 MROH7-TTC4A0A0A0MT08 1334 aa25.77■■□□□ 1.72
SHANK2-220ENST00000608988 NPHP1O15259 732 aa25.77■■□□□ 1.72
SHANK2-220ENST00000608988 RESP18Q5W5W9 173 aa25.77■■□□□ 1.72
SHANK2-220ENST00000608988 OTUD7BQ6GQQ9 843 aa25.77■■□□□ 1.72
SHANK2-220ENST00000608988 RALYLQ86SE5 291 aaKnown RBP25.77■■□□□ 1.72
SHANK2-220ENST00000608988 BCL11BQ9C0K0 894 aaPredicted RBP25.77■■□□□ 1.72
SHANK2-220ENST00000608988 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.77■■□□□ 1.72
SHANK2-220ENST00000608988 ZMYM6O95789 1325 aa25.76■■□□□ 1.71
SHANK2-220ENST00000608988 NUP188Q5SRE5 1749 aa25.76■■□□□ 1.71
SHANK2-220ENST00000608988 KIF28PB7ZC32 967 aa25.76■■□□□ 1.71
SHANK2-220ENST00000608988 ATP5J2-PTCD1G3V325 749 aa25.76■■□□□ 1.71
SHANK2-220ENST00000608988 CUTAO60888 179 aa25.76■■□□□ 1.71
SHANK2-220ENST00000608988 PTCD1O75127 700 aaKnown RBP25.76■■□□□ 1.71
SHANK2-220ENST00000608988 TIMM10P62072 90 aa25.76■■□□□ 1.71
SHANK2-220ENST00000608988 TTLL5Q6EMB2 1281 aa25.76■■□□□ 1.71
SHANK2-220ENST00000608988 TSPYL1Q9H0U9 437 aa25.76■■□□□ 1.71
SHANK2-220ENST00000608988 HOOK1Q9UJC3 728 aaKnown RBP25.76■■□□□ 1.71
SHANK2-220ENST00000608988 A0A1B0GUL7 405 aa25.75■■□□□ 1.71
SHANK2-220ENST00000608988 WDHD1O75717 1129 aaPredicted RBP25.75■■□□□ 1.71
SHANK2-220ENST00000608988 URI1O94763 535 aaPredicted RBP25.75■■□□□ 1.71
SHANK2-220ENST00000608988 CFAP100Q494V2 611 aa25.75■■□□□ 1.71
SHANK2-220ENST00000608988 JAKMIP3Q5VZ66 844 aa25.75■■□□□ 1.71
SHANK2-220ENST00000608988 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.75■■□□□ 1.71
SHANK2-220ENST00000608988 GLI3P10071 1580 aa25.75■■□□□ 1.71
SHANK2-220ENST00000608988 RGPD5Q99666 1765 aa25.75■■□□□ 1.71
SHANK2-220ENST00000608988 ATP1A3P13637 1013 aa25.74■■□□□ 1.71
SHANK2-220ENST00000608988 TBX2Q13207 712 aaPredicted RBP25.74■■□□□ 1.71
SHANK2-220ENST00000608988 CPLX2Q6PUV4 134 aaKnown RBP25.74■■□□□ 1.71
SHANK2-220ENST00000608988 APPBP2Q92624 585 aa25.74■■□□□ 1.71
SHANK2-220ENST00000608988 AKAP2Q9Y2D5 859 aa25.74■■□□□ 1.71
SHANK2-220ENST00000608988 PARP4Q9UKK3 1724 aaKnown RBP25.74■■□□□ 1.71
SHANK2-220ENST00000608988 STX10O60499 249 aa25.74■■□□□ 1.71
SHANK2-220ENST00000608988 SLC20A2Q08357 652 aa25.74■■□□□ 1.71
SHANK2-220ENST00000608988 TXLNBQ8N3L3 684 aa25.74■■□□□ 1.71
SHANK2-220ENST00000608988 C19orf44Q9H6X5 657 aa25.74■■□□□ 1.71
SHANK2-220ENST00000608988 ST7Q9NRC1 585 aa25.74■■□□□ 1.71
SHANK2-220ENST00000608988 PPP2R2CQ9Y2T4 447 aa25.74■■□□□ 1.71
SHANK2-220ENST00000608988 PKD1L3Q7Z443 1732 aa25.73■■□□□ 1.71
SHANK2-220ENST00000608988 ANTXR2P58335 489 aa25.73■■□□□ 1.71
SHANK2-220ENST00000608988 MAP3K9P80192 1104 aa25.73■■□□□ 1.71
SHANK2-220ENST00000608988 PTPAQ15257 358 aa25.73■■□□□ 1.71
SHANK2-220ENST00000608988 TMEM139Q8IV31 216 aa25.73■■□□□ 1.71
SHANK2-220ENST00000608988 ZNF142P52746 1687 aaPredicted RBP25.73■■□□□ 1.71
SHANK2-220ENST00000608988 CASQ1P31415 396 aa25.72■■□□□ 1.71
SHANK2-220ENST00000608988 CCDC102BQ68D86 513 aa25.72■■□□□ 1.71
SHANK2-220ENST00000608988 CCDC191Q8NCU4 936 aa25.72■■□□□ 1.71
SHANK2-220ENST00000608988 UTP14AQ9BVJ6 771 aaKnown RBP25.72■■□□□ 1.71
SHANK2-220ENST00000608988 CARD6Q9BX69 1037 aa25.72■■□□□ 1.71
SHANK2-220ENST00000608988 DACH1Q9UI36 760 aa25.72■■□□□ 1.71
SHANK2-220ENST00000608988 VWA3AA6NCI4 1184 aa25.72■■□□□ 1.71
SHANK2-220ENST00000608988 TULP2O00295 520 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms