RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 SCN4AP35499 1836 aa9.33□□□□□ -0.92
MSH6-211ENST00000606499 MYO3BQ8WXR4 1341 aa9.32□□□□□ -0.92
MSH6-211ENST00000606499 SHTN1A0MZ66 631 aa9.32□□□□□ -0.92
MSH6-211ENST00000606499 SCNN1DP51172 638 aa9.32□□□□□ -0.92
MSH6-211ENST00000606499 FKBP1AP62942 108 aaKnown RBP9.32□□□□□ -0.92
MSH6-211ENST00000606499 MECOMQ03112 1051 aa9.32□□□□□ -0.92
MSH6-211ENST00000606499 TTF1Q15361 905 aaPredicted RBP9.32□□□□□ -0.92
MSH6-211ENST00000606499 DIXDC1Q155Q3 683 aa9.32□□□□□ -0.92
MSH6-211ENST00000606499 SLFNL1Q499Z3 407 aa9.32□□□□□ -0.92
MSH6-211ENST00000606499 BMP2KLQ5H9B9 411 aa9.32□□□□□ -0.92
MSH6-211ENST00000606499 DZIP1Q86YF9 867 aaKnown RBP9.32□□□□□ -0.92
MSH6-211ENST00000606499 ZGPATQ8N5A5 531 aaKnown RBP9.32□□□□□ -0.92
MSH6-211ENST00000606499 KBTBD3Q8NAB2 608 aa9.32□□□□□ -0.92
MSH6-211ENST00000606499 FSD1Q9BTV5 496 aa9.32□□□□□ -0.92
MSH6-211ENST00000606499 RAI14Q9P0K7 980 aa9.32□□□□□ -0.92
MSH6-211ENST00000606499 TTF2Q9UNY4 1162 aaKnown RBP9.32□□□□□ -0.92
MSH6-211ENST00000606499 FOCADQ5VW36 1801 aa9.32□□□□□ -0.92
MSH6-211ENST00000606499 PDE6AP16499 860 aa9.31□□□□□ -0.92
MSH6-211ENST00000606499 SLC9C2Q5TAH2 1124 aa9.31□□□□□ -0.92
MSH6-211ENST00000606499 SPTY2D1Q68D10 685 aaPredicted RBP9.31□□□□□ -0.92
MSH6-211ENST00000606499 ERICH6Q7L0X2 663 aa9.31□□□□□ -0.92
MSH6-211ENST00000606499 CNTROBQ8N137 903 aa9.31□□□□□ -0.92
MSH6-211ENST00000606499 NSUN4Q96CB9 384 aaKnown RBP9.31□□□□□ -0.92
MSH6-211ENST00000606499 EVI5LQ96CN4 794 aa9.31□□□□□ -0.92
MSH6-211ENST00000606499 NAV1Q8NEY1 1877 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 RFX7Q2KHR2 1363 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 TCRBV5S4A2TA0A5A2 114 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 GLTPD2A6NH11 291 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 EGFRP00533 1210 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 USP17L8P0C7I0 530 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 RPS12P25398 132 aaKnown RBP9.3□□□□□ -0.92
MSH6-211ENST00000606499 MAP3K12Q12852 859 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 NAA16Q6N069 864 aaPredicted RBP9.3□□□□□ -0.92
MSH6-211ENST00000606499 ADGRA1Q86SQ6 560 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 MICALL2Q8IY33 904 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 MAGEB6Q8N7X4 407 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 AGBL3Q8NEM8 1001 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.3□□□□□ -0.92
MSH6-211ENST00000606499 GPRC5DQ9NZD1 345 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 SUGT1Q9Y2Z0 365 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 PCDHAC2Q9Y5I4 1007 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 DDX60LQ5H9U9 1706 aaKnown RBP9.3□□□□□ -0.92
MSH6-211ENST00000606499 MROH7-TTC4A0A0A0MT08 1334 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 MAST3O60307 1309 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 ZNF532Q9HCE3 1301 aa9.3□□□□□ -0.92
MSH6-211ENST00000606499 CYP7A1P22680 504 aa9.29□□□□□ -0.92
MSH6-211ENST00000606499 ADD2P35612 726 aa9.29□□□□□ -0.92
MSH6-211ENST00000606499 EPS15P42566 896 aa9.29□□□□□ -0.92
MSH6-211ENST00000606499 CRKP46108 304 aa9.29□□□□□ -0.92
MSH6-211ENST00000606499 DPY19L2Q6NUT2 758 aa9.29□□□□□ -0.92
MSH6-211ENST00000606499 ZNF526Q8TF50 670 aaPredicted RBP9.29□□□□□ -0.92
MSH6-211ENST00000606499 DPF2Q92785 391 aa9.29□□□□□ -0.92
MSH6-211ENST00000606499 L3MBTL3Q96JM7 780 aaPredicted RBP9.29□□□□□ -0.92
MSH6-211ENST00000606499 CNOT7Q9UIV1 285 aaKnown RBP9.29□□□□□ -0.92
MSH6-211ENST00000606499 DAGLAQ9Y4D2 1042 aa9.29□□□□□ -0.92
MSH6-211ENST00000606499 GAKO14976 1311 aa9.29□□□□□ -0.92
MSH6-211ENST00000606499 LAMB1P07942 1786 aa9.28□□□□□ -0.92
MSH6-211ENST00000606499 A0A0D9SFI3 127 aa9.28□□□□□ -0.92
MSH6-211ENST00000606499 RNF113AO15541 343 aaKnown RBP9.28□□□□□ -0.92
MSH6-211ENST00000606499 RBM5P52756 815 aaKnown RBP eCLIP9.28□□□□□ -0.92
MSH6-211ENST00000606499 ZNF280AP59817 542 aaPredicted RBP9.28□□□□□ -0.92
MSH6-211ENST00000606499 GSTO1P78417 241 aa9.28□□□□□ -0.92
MSH6-211ENST00000606499 NMIQ13287 307 aaPredicted RBP9.28□□□□□ -0.92
MSH6-211ENST00000606499 CFAP100Q494V2 611 aa9.28□□□□□ -0.92
MSH6-211ENST00000606499 TBC1D10BQ4KMP7 808 aaPredicted RBP9.28□□□□□ -0.92
MSH6-211ENST00000606499 ZSCAN25Q6NSZ9 544 aa9.28□□□□□ -0.92
MSH6-211ENST00000606499 SAMD7Q7Z3H4 446 aa9.28□□□□□ -0.92
MSH6-211ENST00000606499 OGFOD1Q8N543 542 aa9.28□□□□□ -0.92
MSH6-211ENST00000606499 MIGA1Q8NAN2 632 aa9.28□□□□□ -0.92
MSH6-211ENST00000606499 TEKT1Q969V4 418 aa9.28□□□□□ -0.92
MSH6-211ENST00000606499 FAM227BQ96M60 508 aa9.28□□□□□ -0.92
MSH6-211ENST00000606499 SEC62Q99442 399 aaKnown RBP9.28□□□□□ -0.92
MSH6-211ENST00000606499 MYOZ2Q9NPC6 264 aa9.28□□□□□ -0.92
MSH6-211ENST00000606499 DIAPH3Q9NSV4 1193 aa9.28□□□□□ -0.92
MSH6-211ENST00000606499 SERPINA10Q9UK55 444 aa9.28□□□□□ -0.92
MSH6-211ENST00000606499 HDAC9Q9UKV0 1011 aa9.28□□□□□ -0.92
MSH6-211ENST00000606499 SPDYE2BA6NHP3 402 aa9.27□□□□□ -0.93
MSH6-211ENST00000606499 POTECB2RU33 542 aa9.27□□□□□ -0.93
MSH6-211ENST00000606499 M0R2C6 588 aa9.27□□□□□ -0.93
MSH6-211ENST00000606499 ZFYP08048 801 aaPredicted RBP9.27□□□□□ -0.93
MSH6-211ENST00000606499 SPDYE6P0CI01 402 aa9.27□□□□□ -0.93
MSH6-211ENST00000606499 CHMLP26374 656 aa9.27□□□□□ -0.93
MSH6-211ENST00000606499 LMOD1P29536 600 aaPredicted RBP9.27□□□□□ -0.93
MSH6-211ENST00000606499 BTDP43251 543 aa9.27□□□□□ -0.93
MSH6-211ENST00000606499 DYNLL1P63167 89 aaKnown RBP9.27□□□□□ -0.93
MSH6-211ENST00000606499 UBE3CQ15386 1083 aa9.27□□□□□ -0.93
MSH6-211ENST00000606499 ZMYM1Q5SVZ6 1142 aa9.27□□□□□ -0.93
MSH6-211ENST00000606499 RBM26Q5T8P6 1007 aaKnown RBP9.27□□□□□ -0.93
MSH6-211ENST00000606499 TRPM4Q8TD43 1214 aa9.27□□□□□ -0.93
MSH6-211ENST00000606499 APPBP2Q92624 585 aa9.27□□□□□ -0.93
MSH6-211ENST00000606499 OSBP2Q969R2 916 aa9.27□□□□□ -0.93
MSH6-211ENST00000606499 ZDHHC15Q96MV8 337 aa9.27□□□□□ -0.93
MSH6-211ENST00000606499 PUS7LQ9H0K6 701 aaKnown RBP9.27□□□□□ -0.93
MSH6-211ENST00000606499 IL25Q9H293 177 aa9.27□□□□□ -0.93
MSH6-211ENST00000606499 AATFQ9NY61 560 aaKnown RBP eCLIP9.27□□□□□ -0.93
MSH6-211ENST00000606499 ASTN2O75129 1339 aaPredicted RBP9.27□□□□□ -0.93
MSH6-211ENST00000606499 LAMA4Q16363 1823 aa9.26□□□□□ -0.93
MSH6-211ENST00000606499 MAGEB6P1A0A0J9YX57 407 aa9.26□□□□□ -0.93
MSH6-211ENST00000606499 H7C1D1 291 aa9.26□□□□□ -0.93
MSH6-211ENST00000606499 CDC45O75419 566 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms