RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 OS9Q13438 667 aaPredicted RBP23.72■■□□□ 1.39
SRSF4-206ENST00000605204 CFAP100Q494V2 611 aa23.72■■□□□ 1.39
SRSF4-206ENST00000605204 BEGAINQ9BUH8 593 aa23.72■■□□□ 1.39
SRSF4-206ENST00000605204 COG6Q9Y2V7 657 aa23.72■■□□□ 1.39
SRSF4-206ENST00000605204 NOP58Q9Y2X3 529 aaKnown RBP23.72■■□□□ 1.39
SRSF4-206ENST00000605204 FKBP1BP68106 108 aa23.71■■□□□ 1.39
SRSF4-206ENST00000605204 RPAP2Q8IXW5 612 aaPredicted RBP23.71■■□□□ 1.39
SRSF4-206ENST00000605204 CDCA5Q96FF9 252 aa23.71■■□□□ 1.39
SRSF4-206ENST00000605204 MRIQ9BWK5 157 aa23.71■■□□□ 1.39
SRSF4-206ENST00000605204 ZBTB40Q9NUA8 1239 aa23.71■■□□□ 1.39
SRSF4-206ENST00000605204 PPP2R3BQ9Y5P8 575 aa23.71■■□□□ 1.39
SRSF4-206ENST00000605204 HMMRO75330 724 aa23.7■■□□□ 1.38
SRSF4-206ENST00000605204 SURF6O75683 361 aaKnown RBP23.7■■□□□ 1.38
SRSF4-206ENST00000605204 CCDC102BQ68D86 513 aa23.7■■□□□ 1.38
SRSF4-206ENST00000605204 ZGPATQ8N5A5 531 aaKnown RBP23.7■■□□□ 1.38
SRSF4-206ENST00000605204 C2orf69Q8N8R5 385 aa23.7■■□□□ 1.38
SRSF4-206ENST00000605204 SALL1Q9NSC2 1324 aa23.7■■□□□ 1.38
SRSF4-206ENST00000605204 RBM5P52756 815 aaKnown RBP eCLIP23.69■■□□□ 1.38
SRSF4-206ENST00000605204 HSP90AB4PQ58FF6 505 aa23.69■■□□□ 1.38
SRSF4-206ENST00000605204 ERC1Q8IUD2 1116 aa23.69■■□□□ 1.38
SRSF4-206ENST00000605204 GBA2Q9HCG7 927 aaPredicted RBP23.69■■□□□ 1.38
SRSF4-206ENST00000605204 NF2P35240 595 aa23.68■■□□□ 1.38
SRSF4-206ENST00000605204 PHKA1P46020 1223 aa23.68■■□□□ 1.38
SRSF4-206ENST00000605204 TIMM10P62072 90 aa23.68■■□□□ 1.38
SRSF4-206ENST00000605204 TEKT1Q969V4 418 aa23.68■■□□□ 1.38
SRSF4-206ENST00000605204 XAGE2Q96GT9 111 aa23.68■■□□□ 1.38
SRSF4-206ENST00000605204 ADORA1P30542 326 aa23.67■■□□□ 1.38
SRSF4-206ENST00000605204 HUNKP57058 714 aa23.67■■□□□ 1.38
SRSF4-206ENST00000605204 TNFAIP1Q13829 316 aa23.67■■□□□ 1.38
SRSF4-206ENST00000605204 GORABQ5T7V8 394 aa23.67■■□□□ 1.38
SRSF4-206ENST00000605204 YTHDC1Q96MU7 727 aaKnown RBP23.67■■□□□ 1.38
SRSF4-206ENST00000605204 CRKP46108 304 aa23.66■■□□□ 1.38
SRSF4-206ENST00000605204 PRMT6Q96LA8 375 aaPredicted RBP23.66■■□□□ 1.38
SRSF4-206ENST00000605204 NEUROD6Q96NK8 337 aa23.66■■□□□ 1.38
SRSF4-206ENST00000605204 ZDHHC15Q96MV8 337 aa23.65■■□□□ 1.38
SRSF4-206ENST00000605204 FAM155AB1AL88 458 aaPredicted RBP23.65■■□□□ 1.38
SRSF4-206ENST00000605204 TNNI3KQ59H18 835 aa23.65■■□□□ 1.38
SRSF4-206ENST00000605204 HHIPL2Q6UWX4 724 aa23.65■■□□□ 1.38
SRSF4-206ENST00000605204 FPGT-TNNI3KV9GXZ4 949 aa23.65■■□□□ 1.38
SRSF4-206ENST00000605204 LDHBP07195 334 aaKnown RBP23.64■■□□□ 1.37
SRSF4-206ENST00000605204 UQCRFS1P1P0C7P4 283 aa23.64■■□□□ 1.37
SRSF4-206ENST00000605204 RASGRF1Q13972 1273 aa23.64■■□□□ 1.37
SRSF4-206ENST00000605204 SPDYE2Q495Y8 402 aa23.64■■□□□ 1.37
SRSF4-206ENST00000605204 DEFB129Q9H1M3 183 aa23.64■■□□□ 1.37
SRSF4-206ENST00000605204 PAPPA2Q9BXP8 1791 aa23.63■■□□□ 1.37
SRSF4-206ENST00000605204 CCDC85CA6NKD9 419 aa23.63■■□□□ 1.37
SRSF4-206ENST00000605204 CA12O43570 354 aa23.63■■□□□ 1.37
SRSF4-206ENST00000605204 NOGQ13253 232 aa23.63■■□□□ 1.37
SRSF4-206ENST00000605204 SPTY2D1Q68D10 685 aaPredicted RBP23.63■■□□□ 1.37
SRSF4-206ENST00000605204 MCOLN1Q9GZU1 580 aa23.63■■□□□ 1.37
SRSF4-206ENST00000605204 ARID4AP29374 1257 aaPredicted RBP23.62■■□□□ 1.37
SRSF4-206ENST00000605204 TNNI2P48788 182 aa23.62■■□□□ 1.37
SRSF4-206ENST00000605204 GRIK5Q16478 980 aa23.62■■□□□ 1.37
SRSF4-206ENST00000605204 VEZTQ9HBM0 779 aa23.62■■□□□ 1.37
SRSF4-206ENST00000605204 TMOD2Q9NZR1 351 aa23.62■■□□□ 1.37
SRSF4-206ENST00000605204 CLRN2A0PK11 232 aa23.61■■□□□ 1.37
SRSF4-206ENST00000605204 IGSF3O75054 1194 aa23.61■■□□□ 1.37
SRSF4-206ENST00000605204 SUPT20HL1Q3ZLR7 823 aa23.61■■□□□ 1.37
SRSF4-206ENST00000605204 CCDC158Q5M9N0 1113 aa23.61■■□□□ 1.37
SRSF4-206ENST00000605204 C20orf194Q5TEA3 1177 aa23.61■■□□□ 1.37
SRSF4-206ENST00000605204 FKBP1CQ5VVH2 108 aa23.61■■□□□ 1.37
SRSF4-206ENST00000605204 SLF2Q8IX21 1173 aa23.61■■□□□ 1.37
SRSF4-206ENST00000605204 CCDC102AQ96A19 550 aa23.61■■□□□ 1.37
SRSF4-206ENST00000605204 ZNF70Q9UC06 446 aaPredicted RBP23.61■■□□□ 1.37
SRSF4-206ENST00000605204 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.61■■□□□ 1.37
SRSF4-206ENST00000605204 TNRC18O15417 2968 aaPredicted RBP23.61■■□□□ 1.37
SRSF4-206ENST00000605204 RRP1P56182 461 aaKnown RBP23.6■■□□□ 1.37
SRSF4-206ENST00000605204 RGMBQ6NW40 437 aa23.6■■□□□ 1.37
SRSF4-206ENST00000605204 ZNF512BQ96KM6 892 aaPredicted RBP23.6■■□□□ 1.37
SRSF4-206ENST00000605204 PCDHAC2Q9Y5I4 1007 aa23.6■■□□□ 1.37
SRSF4-206ENST00000605204 AKAP11Q9UKA4 1901 aa23.6■■□□□ 1.37
SRSF4-206ENST00000605204 ECM29Q5VYK3 1845 aa23.59■■□□□ 1.37
SRSF4-206ENST00000605204 PRDX5P30044 214 aa23.59■■□□□ 1.37
SRSF4-206ENST00000605204 SPATA5Q8NB90 893 aa23.59■■□□□ 1.37
SRSF4-206ENST00000605204 TDRD3Q9H7E2 651 aaKnown RBP23.59■■□□□ 1.37
SRSF4-206ENST00000605204 MYH13Q9UKX3 1938 aa23.58■■□□□ 1.37
SRSF4-206ENST00000605204 ARMC9Q7Z3E5 817 aa23.58■■□□□ 1.37
SRSF4-206ENST00000605204 DZIP1Q86YF9 867 aaKnown RBP23.58■■□□□ 1.37
SRSF4-206ENST00000605204 EXOC6BQ9Y2D4 811 aa23.58■■□□□ 1.37
SRSF4-206ENST00000605204 UNCXA6NJT0 531 aa23.57■■□□□ 1.36
SRSF4-206ENST00000605204 RAB11FIP3O75154 756 aa23.57■■□□□ 1.36
SRSF4-206ENST00000605204 RASA3Q14644 834 aa23.57■■□□□ 1.36
SRSF4-206ENST00000605204 TTC39AQ5SRH9 613 aa23.57■■□□□ 1.36
SRSF4-206ENST00000605204 APOBEC3HQ6NTF7 200 aaKnown RBP23.57■■□□□ 1.36
SRSF4-206ENST00000605204 KIF1BPQ96EK5 621 aa23.57■■□□□ 1.36
SRSF4-206ENST00000605204 HMG20BQ9P0W2 317 aa23.57■■□□□ 1.36
SRSF4-206ENST00000605204 SCAF8Q9UPN6 1271 aaKnown RBP23.57■■□□□ 1.36
SRSF4-206ENST00000605204 PPP1R12BO60237 982 aaPredicted RBP23.56■■□□□ 1.36
SRSF4-206ENST00000605204 SLC10A3P09131 477 aa23.56■■□□□ 1.36
SRSF4-206ENST00000605204 FAM83AQ86UY5 434 aa23.56■■□□□ 1.36
SRSF4-206ENST00000605204 ABCF2Q9UG63 623 aa23.56■■□□□ 1.36
SRSF4-206ENST00000605204 ZNF157P51786 506 aaPredicted RBP23.55■■□□□ 1.36
SRSF4-206ENST00000605204 KIF23Q02241 960 aaPredicted RBP23.55■■□□□ 1.36
SRSF4-206ENST00000605204 DGKZQ13574 1117 aa23.55■■□□□ 1.36
SRSF4-206ENST00000605204 TTLL12Q14166 644 aaPredicted RBP23.55■■□□□ 1.36
SRSF4-206ENST00000605204 PRAMEF18Q5VWM3 479 aa23.55■■□□□ 1.36
SRSF4-206ENST00000605204 SIRT2Q8IXJ6 389 aa23.55■■□□□ 1.36
SRSF4-206ENST00000605204 CLASRPQ8N2M8 674 aaKnown RBP23.55■■□□□ 1.36
SRSF4-206ENST00000605204 RHPN1Q8TCX5 695 aa23.55■■□□□ 1.36
SRSF4-206ENST00000605204 HOOK2Q96ED9 719 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 1332 ms