RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 POLLQ9UGP5 575 aa16.36■□□□□ 0.21
IRF3-229ENST00000601373 COL11A2P13942 1736 aaPredicted RBP16.36■□□□□ 0.21
IRF3-229ENST00000601373 GNAT2P19087 354 aa16.35■□□□□ 0.21
IRF3-229ENST00000601373 ZC3H12CQ9C0D7 883 aaKnown RBP16.35■□□□□ 0.21
IRF3-229ENST00000601373 ZSWIM6Q9HCJ5 1215 aa16.35■□□□□ 0.21
IRF3-229ENST00000601373 COL1A1P02452 1464 aaPredicted RBP16.35■□□□□ 0.21
IRF3-229ENST00000601373 MYO5AQ9Y4I1 1855 aaKnown RBP16.34■□□□□ 0.21
IRF3-229ENST00000601373 CYP7A1P22680 504 aa16.34■□□□□ 0.21
IRF3-229ENST00000601373 CHRNA5P30532 468 aa16.34■□□□□ 0.21
IRF3-229ENST00000601373 CHAF1AQ13111 956 aaPredicted RBP16.34■□□□□ 0.21
IRF3-229ENST00000601373 DNAJC5GQ8N7S2 189 aa16.34■□□□□ 0.21
IRF3-229ENST00000601373 JAKMIP1Q96N16 626 aaKnown RBP16.34■□□□□ 0.21
IRF3-229ENST00000601373 STRBPQ96SI9 672 aaKnown RBP16.34■□□□□ 0.21
IRF3-229ENST00000601373 COA1Q9GZY4 146 aa16.34■□□□□ 0.21
IRF3-229ENST00000601373 CYP46A1Q9Y6A2 500 aa16.34■□□□□ 0.21
IRF3-229ENST00000601373 MYH13Q9UKX3 1938 aa16.34■□□□□ 0.21
IRF3-229ENST00000601373 RPAP1Q9BWH6 1393 aaPredicted RBP16.34■□□□□ 0.21
IRF3-229ENST00000601373 LTBP1Q14766 1721 aa16.33■□□□□ 0.21
IRF3-229ENST00000601373 ALX1Q15699 326 aa16.33■□□□□ 0.2
IRF3-229ENST00000601373 VPS53Q5VIR6 699 aa16.33■□□□□ 0.2
IRF3-229ENST00000601373 NAA16Q6N069 864 aaPredicted RBP16.33■□□□□ 0.2
IRF3-229ENST00000601373 PATL2C9JE40 543 aaKnown RBP16.32■□□□□ 0.2
IRF3-229ENST00000601373 CD2BP2O95400 341 aaKnown RBP16.32■□□□□ 0.2
IRF3-229ENST00000601373 HMGB1P09429 215 aaKnown RBP16.32■□□□□ 0.2
IRF3-229ENST00000601373 CASTP20810 708 aaKnown RBP16.32■□□□□ 0.2
IRF3-229ENST00000601373 IMMTQ16891 758 aaKnown RBP16.32■□□□□ 0.2
IRF3-229ENST00000601373 RUFY3Q7L099 469 aa16.32■□□□□ 0.2
IRF3-229ENST00000601373 SUPT20HQ8NEM7 779 aa16.32■□□□□ 0.2
IRF3-229ENST00000601373 TBC1D22AQ8WUA7 517 aa16.32■□□□□ 0.2
IRF3-229ENST00000601373 UPF3BQ9BZI7 483 aaKnown RBP16.32■□□□□ 0.2
IRF3-229ENST00000601373 DUOX1Q9NRD9 1551 aa16.31■□□□□ 0.2
IRF3-229ENST00000601373 ZMYM6O95789 1325 aa16.31■□□□□ 0.2
IRF3-229ENST00000601373 MAGEB6P1A0A0J9YX57 407 aa16.31■□□□□ 0.2
IRF3-229ENST00000601373 MBD4O95243 580 aa16.31■□□□□ 0.2
IRF3-229ENST00000601373 FGAP02671 866 aa16.31■□□□□ 0.2
IRF3-229ENST00000601373 LDHBP07195 334 aaKnown RBP16.31■□□□□ 0.2
IRF3-229ENST00000601373 CYP21A2P08686 494 aa16.31■□□□□ 0.2
IRF3-229ENST00000601373 GSTO1P78417 241 aa16.31■□□□□ 0.2
IRF3-229ENST00000601373 BLOC1S2Q6QNY1 142 aa16.31■□□□□ 0.2
IRF3-229ENST00000601373 SLC51AQ86UW1 340 aa16.31■□□□□ 0.2
IRF3-229ENST00000601373 TTLL6Q8N841 843 aa16.31■□□□□ 0.2
IRF3-229ENST00000601373 RBM46Q8TBY0 533 aaKnown RBP16.31■□□□□ 0.2
IRF3-229ENST00000601373 C7orf43Q8WVR3 580 aa16.31■□□□□ 0.2
IRF3-229ENST00000601373 NSUN4Q96CB9 384 aaKnown RBP16.31■□□□□ 0.2
IRF3-229ENST00000601373 GPR101Q96P66 508 aaPredicted RBP16.31■□□□□ 0.2
IRF3-229ENST00000601373 RTFDC1Q9BY42 306 aaPredicted RBP16.31■□□□□ 0.2
IRF3-229ENST00000601373 NACAP1Q9BZK3 213 aa16.31■□□□□ 0.2
IRF3-229ENST00000601373 ALDH8A1Q9H2A2 487 aaPredicted RBP16.31■□□□□ 0.2
IRF3-229ENST00000601373 FAM205AQ6ZU69 1335 aa16.3■□□□□ 0.2
IRF3-229ENST00000601373 G3V3G9 751 aa16.3■□□□□ 0.2
IRF3-229ENST00000601373 APPP05067 770 aa16.3■□□□□ 0.2
IRF3-229ENST00000601373 LDHCP07864 332 aa16.3■□□□□ 0.2
IRF3-229ENST00000601373 HSP90AA1P07900 732 aaKnown RBP16.3■□□□□ 0.2
IRF3-229ENST00000601373 ADCK5Q3MIX3 580 aa16.3■□□□□ 0.2
IRF3-229ENST00000601373 DCAF8Q5TAQ9 597 aa16.3■□□□□ 0.2
IRF3-229ENST00000601373 TTC14Q96N46 770 aa16.3■□□□□ 0.2
IRF3-229ENST00000601373 NEK1Q96PY6 1258 aa16.3■□□□□ 0.2
IRF3-229ENST00000601373 PDRG1Q9NUG6 133 aa16.3■□□□□ 0.2
IRF3-229ENST00000601373 SLX4Q8IY92 1834 aa16.29■□□□□ 0.2
IRF3-229ENST00000601373 ZNF213O14771 459 aa16.29■□□□□ 0.2
IRF3-229ENST00000601373 RIMBP2O15034 1052 aa16.29■□□□□ 0.2
IRF3-229ENST00000601373 MECOMQ03112 1051 aa16.29■□□□□ 0.2
IRF3-229ENST00000601373 FSTL1Q12841 308 aa16.29■□□□□ 0.2
IRF3-229ENST00000601373 ANKRD1Q15327 319 aa16.29■□□□□ 0.2
IRF3-229ENST00000601373 DZIP1Q86YF9 867 aaKnown RBP16.29■□□□□ 0.2
IRF3-229ENST00000601373 ARMT1Q9H993 441 aa16.29■□□□□ 0.2
IRF3-229ENST00000601373 BCS1LQ9Y276 419 aa16.29■□□□□ 0.2
IRF3-229ENST00000601373 SUGT1Q9Y2Z0 365 aa16.29■□□□□ 0.2
IRF3-229ENST00000601373 CCDC88AQ3V6T2 1871 aa16.29■□□□□ 0.2
IRF3-229ENST00000601373 FOXP2O15409 715 aa16.28■□□□□ 0.2
IRF3-229ENST00000601373 DPEP1P16444 411 aa16.28■□□□□ 0.2
IRF3-229ENST00000601373 RPS6KB1P23443 525 aa16.28■□□□□ 0.2
IRF3-229ENST00000601373 SOGA3Q5TF21 947 aa16.28■□□□□ 0.2
IRF3-229ENST00000601373 ARHGAP27Q6ZUM4 889 aa16.28■□□□□ 0.2
IRF3-229ENST00000601373 PODNQ7Z5L7 613 aa16.28■□□□□ 0.2
IRF3-229ENST00000601373 CERS3Q8IU89 383 aa16.28■□□□□ 0.2
IRF3-229ENST00000601373 SLF2Q8IX21 1173 aa16.28■□□□□ 0.2
IRF3-229ENST00000601373 RTKN2Q8IZC4 609 aa16.28■□□□□ 0.2
IRF3-229ENST00000601373 IFNL3Q8IZI9 196 aa16.28■□□□□ 0.2
IRF3-229ENST00000601373 SLC4A4Q9Y6R1 1079 aa16.28■□□□□ 0.2
IRF3-229ENST00000601373 CACNA1SQ13698 1873 aa16.28■□□□□ 0.2
IRF3-229ENST00000601373 KIF13BQ9NQT8 1826 aa16.28■□□□□ 0.2
IRF3-229ENST00000601373 DLEC1Q9Y238 1755 aa16.28■□□□□ 0.2
IRF3-229ENST00000601373 GSG1L2A8MUP6 293 aa16.27■□□□□ 0.2
IRF3-229ENST00000601373 PRDX5P30044 214 aa16.27■□□□□ 0.2
IRF3-229ENST00000601373 CCDC93Q567U6 631 aa16.27■□□□□ 0.2
IRF3-229ENST00000601373 OLFM4Q6UX06 510 aa16.27■□□□□ 0.2
IRF3-229ENST00000601373 LCORLQ8N3X6 602 aa16.27■□□□□ 0.2
IRF3-229ENST00000601373 MIGA1Q8NAN2 632 aa16.27■□□□□ 0.2
IRF3-229ENST00000601373 TMX3Q96JJ7 454 aa16.27■□□□□ 0.2
IRF3-229ENST00000601373 ZSCAN31Q96LW9 406 aaPredicted RBP16.27■□□□□ 0.2
IRF3-229ENST00000601373 RIOK1Q9BRS2 568 aaKnown RBP16.27■□□□□ 0.2
IRF3-229ENST00000601373 NAPBQ9H115 298 aa16.27■□□□□ 0.2
IRF3-229ENST00000601373 LIMCH1Q9UPQ0 1083 aa16.27■□□□□ 0.2
IRF3-229ENST00000601373 MAST2Q6P0Q8 1798 aa16.26■□□□□ 0.19
IRF3-229ENST00000601373 A0A0G2JLW4 131 aa16.26■□□□□ 0.19
IRF3-229ENST00000601373 E7EWF7 191 aa16.26■□□□□ 0.19
IRF3-229ENST00000601373 KCNA3P22001 575 aa16.26■□□□□ 0.19
IRF3-229ENST00000601373 AK2P54819 239 aa16.26■□□□□ 0.19
IRF3-229ENST00000601373 TTLL5Q6EMB2 1281 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms