RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 MCAMP43121 646 aa16.9■□□□□ 0.3
SNRPA-208ENST00000600456 CRKP46108 304 aa16.9■□□□□ 0.3
SNRPA-208ENST00000600456 NBPF9Q3BBW0 867 aa16.9■□□□□ 0.3
SNRPA-208ENST00000600456 TEKT1Q969V4 418 aa16.9■□□□□ 0.3
SNRPA-208ENST00000600456 PASKQ96RG2 1323 aa16.9■□□□□ 0.3
SNRPA-208ENST00000600456 CENPBP07199 599 aaPredicted RBP16.89■□□□□ 0.29
SNRPA-208ENST00000600456 HSPA6P17066 643 aa16.89■□□□□ 0.29
SNRPA-208ENST00000600456 PRDX5P30044 214 aa16.89■□□□□ 0.29
SNRPA-208ENST00000600456 RBM5P52756 815 aaKnown RBP eCLIP16.89■□□□□ 0.29
SNRPA-208ENST00000600456 IRX6P78412 446 aaPredicted RBP16.89■□□□□ 0.29
SNRPA-208ENST00000600456 ANGEL2Q5VTE6 544 aaKnown RBP16.89■□□□□ 0.29
SNRPA-208ENST00000600456 HHIPL2Q6UWX4 724 aa16.89■□□□□ 0.29
SNRPA-208ENST00000600456 SULF1Q8IWU6 871 aa16.89■□□□□ 0.29
SNRPA-208ENST00000600456 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.89■□□□□ 0.29
SNRPA-208ENST00000600456 ABCF2Q9UG63 623 aa16.89■□□□□ 0.29
SNRPA-208ENST00000600456 PI16Q6UXB8 463 aa16.88■□□□□ 0.29
SNRPA-208ENST00000600456 KRT26Q7Z3Y9 468 aa16.88■□□□□ 0.29
SNRPA-208ENST00000600456 ZDHHC15Q96MV8 337 aa16.88■□□□□ 0.29
SNRPA-208ENST00000600456 ASTN2O75129 1339 aaPredicted RBP16.88■□□□□ 0.29
SNRPA-208ENST00000600456 SMARCA5O60264 1052 aaPredicted RBP16.87■□□□□ 0.29
SNRPA-208ENST00000600456 APLP1P51693 650 aa16.87■□□□□ 0.29
SNRPA-208ENST00000600456 ERICH6Q7L0X2 663 aa16.87■□□□□ 0.29
SNRPA-208ENST00000600456 DZIP1Q86YF9 867 aaKnown RBP16.87■□□□□ 0.29
SNRPA-208ENST00000600456 APOBEC3FQ8IUX4 373 aaKnown RBP16.87■□□□□ 0.29
SNRPA-208ENST00000600456 SLF2Q8IX21 1173 aa16.87■□□□□ 0.29
SNRPA-208ENST00000600456 PRMT6Q96LA8 375 aaPredicted RBP16.87■□□□□ 0.29
SNRPA-208ENST00000600456 GLIS2Q9BZE0 524 aaPredicted RBP16.87■□□□□ 0.29
SNRPA-208ENST00000600456 ZBTB47Q9UFB7 747 aaPredicted RBP16.87■□□□□ 0.29
SNRPA-208ENST00000600456 SMC5Q8IY18 1101 aa16.86■□□□□ 0.29
SNRPA-208ENST00000600456 GPATCH3Q96I76 525 aa16.86■□□□□ 0.29
SNRPA-208ENST00000600456 SNRKQ9NRH2 765 aa16.86■□□□□ 0.29
SNRPA-208ENST00000600456 CYP2E1P05181 493 aaPredicted RBP16.85■□□□□ 0.29
SNRPA-208ENST00000600456 ATP5JP18859 108 aa16.85■□□□□ 0.29
SNRPA-208ENST00000600456 ZAP70P43403 619 aa16.85■□□□□ 0.29
SNRPA-208ENST00000600456 GSTO1P78417 241 aa16.85■□□□□ 0.29
SNRPA-208ENST00000600456 TBC1D9Q6ZT07 1266 aa16.85■□□□□ 0.29
SNRPA-208ENST00000600456 USP48Q86UV5 1035 aa16.85■□□□□ 0.29
SNRPA-208ENST00000600456 FAM163AQ96GL9 167 aaPredicted RBP16.85■□□□□ 0.29
SNRPA-208ENST00000600456 BCL11AQ9H165 835 aa16.85■□□□□ 0.29
SNRPA-208ENST00000600456 LRP2BPQ9P2M1 347 aa16.85■□□□□ 0.29
SNRPA-208ENST00000600456 PCDHAC2Q9Y5I4 1007 aa16.85■□□□□ 0.29
SNRPA-208ENST00000600456 ADM5C9JUS6 153 aa16.84■□□□□ 0.29
SNRPA-208ENST00000600456 TRAF5O00463 557 aa16.84■□□□□ 0.29
SNRPA-208ENST00000600456 TNFAIP1Q13829 316 aa16.84■□□□□ 0.29
SNRPA-208ENST00000600456 SPDYE2Q495Y8 402 aa16.84■□□□□ 0.29
SNRPA-208ENST00000600456 APOBEC3HQ6NTF7 200 aaKnown RBP16.84■□□□□ 0.29
SNRPA-208ENST00000600456 TMED8Q6PL24 325 aaPredicted RBP16.84■□□□□ 0.29
SNRPA-208ENST00000600456 ECHDC1Q9NTX5 307 aa16.84■□□□□ 0.29
SNRPA-208ENST00000600456 RAI14Q9P0K7 980 aa16.84■□□□□ 0.29
SNRPA-208ENST00000600456 DAGLAQ9Y4D2 1042 aa16.84■□□□□ 0.29
SNRPA-208ENST00000600456 PPP2R3BQ9Y5P8 575 aa16.84■□□□□ 0.29
SNRPA-208ENST00000600456 GAKO14976 1311 aa16.84■□□□□ 0.29
SNRPA-208ENST00000600456 IGHDP01880 384 aa16.83■□□□□ 0.28
SNRPA-208ENST00000600456 LDHCP07864 332 aa16.83■□□□□ 0.28
SNRPA-208ENST00000600456 MECOMQ03112 1051 aa16.83■□□□□ 0.28
SNRPA-208ENST00000600456 TTF1Q15361 905 aaPredicted RBP16.83■□□□□ 0.28
SNRPA-208ENST00000600456 DIXDC1Q155Q3 683 aa16.83■□□□□ 0.28
SNRPA-208ENST00000600456 ANKRD45Q5TZF3 282 aa16.83■□□□□ 0.28
SNRPA-208ENST00000600456 NSUN4Q96CB9 384 aaKnown RBP16.83■□□□□ 0.28
SNRPA-208ENST00000600456 TDRD3Q9H7E2 651 aaKnown RBP16.83■□□□□ 0.28
SNRPA-208ENST00000600456 CREBZFQ9NS37 354 aa16.83■□□□□ 0.28
SNRPA-208ENST00000600456 TMOD2Q9NZR1 351 aa16.83■□□□□ 0.28
SNRPA-208ENST00000600456 ZNF70Q9UC06 446 aaPredicted RBP16.83■□□□□ 0.28
SNRPA-208ENST00000600456 AKAP11Q9UKA4 1901 aa16.83■□□□□ 0.28
SNRPA-208ENST00000600456 MROH7-TTC4A0A0A0MT08 1334 aa16.82■□□□□ 0.28
SNRPA-208ENST00000600456 CLRN2A0PK11 232 aa16.82■□□□□ 0.28
SNRPA-208ENST00000600456 TMEM88BA6NKF7 163 aa16.82■□□□□ 0.28
SNRPA-208ENST00000600456 FKBP1CQ5VVH2 108 aa16.82■□□□□ 0.28
SNRPA-208ENST00000600456 PIH1D3Q9NQM4 214 aaKnown RBP16.82■□□□□ 0.28
SNRPA-208ENST00000600456 AOX1Q06278 1338 aa16.81■□□□□ 0.28
SNRPA-208ENST00000600456 TTC41PQ6P2S7 1318 aa16.81■□□□□ 0.28
SNRPA-208ENST00000600456 TNNI2P48788 182 aa16.81■□□□□ 0.28
SNRPA-208ENST00000600456 CDCA5Q96FF9 252 aa16.81■□□□□ 0.28
SNRPA-208ENST00000600456 HAUS7Q99871 368 aa16.81■□□□□ 0.28
SNRPA-208ENST00000600456 DEFB129Q9H1M3 183 aa16.81■□□□□ 0.28
SNRPA-208ENST00000600456 VEZTQ9HBM0 779 aa16.81■□□□□ 0.28
SNRPA-208ENST00000600456 ECM29Q5VYK3 1845 aa16.81■□□□□ 0.28
SNRPA-208ENST00000600456 GPR75-ASB3A0A0A6YYF3 556 aa16.8■□□□□ 0.28
SNRPA-208ENST00000600456 CELF2O95319 508 aaKnown RBP16.8■□□□□ 0.28
SNRPA-208ENST00000600456 MAP4K4O95819 1239 aaPredicted RBP16.8■□□□□ 0.28
SNRPA-208ENST00000600456 MAP3K12Q12852 859 aa16.8■□□□□ 0.28
SNRPA-208ENST00000600456 NAA16Q6N069 864 aaPredicted RBP16.8■□□□□ 0.28
SNRPA-208ENST00000600456 ZNF384Q8TF68 577 aa16.8■□□□□ 0.28
SNRPA-208ENST00000600456 BOLA2Q9H3K6 86 aa16.8■□□□□ 0.28
SNRPA-208ENST00000600456 GOLIM4O00461 696 aa16.79■□□□□ 0.28
SNRPA-208ENST00000600456 ERC2O15083 957 aa16.79■□□□□ 0.28
SNRPA-208ENST00000600456 IDH1O75874 414 aaKnown RBP16.79■□□□□ 0.28
SNRPA-208ENST00000600456 MX1P20591 662 aa16.79■□□□□ 0.28
SNRPA-208ENST00000600456 NF2P35240 595 aa16.79■□□□□ 0.28
SNRPA-208ENST00000600456 NUCB1Q02818 461 aa16.79■□□□□ 0.28
SNRPA-208ENST00000600456 FMR1Q06787 632 aaKnown RBP eCLIP16.79■□□□□ 0.28
SNRPA-208ENST00000600456 CST9Q5W186 159 aa16.79■□□□□ 0.28
SNRPA-208ENST00000600456 CDC42EP5Q6NZY7 148 aa16.79■□□□□ 0.28
SNRPA-208ENST00000600456 FAM83AQ86UY5 434 aa16.79■□□□□ 0.28
SNRPA-208ENST00000600456 DNAJC2Q99543 621 aaKnown RBP16.79■□□□□ 0.28
SNRPA-208ENST00000600456 ANTXR1Q9H6X2 564 aa16.79■□□□□ 0.28
SNRPA-208ENST00000600456 ZNF408Q9H9D4 720 aa16.79■□□□□ 0.28
SNRPA-208ENST00000600456 PAG1Q9NWQ8 432 aa16.79■□□□□ 0.28
SNRPA-208ENST00000600456 NDUFB9Q9Y6M9 179 aa16.79■□□□□ 0.28
SNRPA-208ENST00000600456 MAST2Q6P0Q8 1798 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms