RNA–Protein interactions for RNA: ENST00000598355.1

TRIM28-213, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-213ENST00000598355 SSC5DA1L4H1 1573 aa19.92■□□□□ 0.78
TRIM28-213ENST00000598355 ARID4AP29374 1257 aaPredicted RBP19.92■□□□□ 0.78
TRIM28-213ENST00000598355 CRKP46108 304 aa19.92■□□□□ 0.78
TRIM28-213ENST00000598355 RRP1P56182 461 aaKnown RBP19.92■□□□□ 0.78
TRIM28-213ENST00000598355 TNNI3KQ59H18 835 aa19.92■□□□□ 0.78
TRIM28-213ENST00000598355 ABT1Q9ULW3 272 aaKnown RBP19.92■□□□□ 0.78
TRIM28-213ENST00000598355 FPGT-TNNI3KV9GXZ4 949 aa19.92■□□□□ 0.78
TRIM28-213ENST00000598355 DOCK2Q92608 1830 aa19.92■□□□□ 0.78
TRIM28-213ENST00000598355 OTOFQ9HC10 1997 aa19.92■□□□□ 0.78
TRIM28-213ENST00000598355 VEGFBP49765 207 aa19.91■□□□□ 0.78
TRIM28-213ENST00000598355 DEFB115Q30KQ5 88 aa19.91■□□□□ 0.78
TRIM28-213ENST00000598355 SPDYE2Q495Y8 402 aa19.91■□□□□ 0.78
TRIM28-213ENST00000598355 GBA2Q9HCG7 927 aaPredicted RBP19.91■□□□□ 0.78
TRIM28-213ENST00000598355 PRDX5P30044 214 aa19.9■□□□□ 0.78
TRIM28-213ENST00000598355 ZDHHC15Q96MV8 337 aa19.9■□□□□ 0.78
TRIM28-213ENST00000598355 ZNF408Q9H9D4 720 aa19.9■□□□□ 0.78
TRIM28-213ENST00000598355 PPP2R3BQ9Y5P8 575 aa19.9■□□□□ 0.78
TRIM28-213ENST00000598355 MYO1BO43795 1136 aa19.89■□□□□ 0.77
TRIM28-213ENST00000598355 FKBP1BP68106 108 aa19.89■□□□□ 0.77
TRIM28-213ENST00000598355 HHIPL2Q6UWX4 724 aa19.89■□□□□ 0.77
TRIM28-213ENST00000598355 TEKT1Q969V4 418 aa19.89■□□□□ 0.77
TRIM28-213ENST00000598355 SCAF8Q9UPN6 1271 aaKnown RBP19.89■□□□□ 0.77
TRIM28-213ENST00000598355 HMMRO75330 724 aa19.88■□□□□ 0.77
TRIM28-213ENST00000598355 OS9Q13438 667 aaPredicted RBP19.88■□□□□ 0.77
TRIM28-213ENST00000598355 ERC1Q8IUD2 1116 aa19.88■□□□□ 0.77
TRIM28-213ENST00000598355 ZNF512BQ96KM6 892 aaPredicted RBP19.88■□□□□ 0.77
TRIM28-213ENST00000598355 NEUROD6Q96NK8 337 aa19.88■□□□□ 0.77
TRIM28-213ENST00000598355 EXOC6BQ9Y2D4 811 aa19.88■□□□□ 0.77
TRIM28-213ENST00000598355 WDR33Q9C0J8 1336 aaKnown RBP19.87■□□□□ 0.77
TRIM28-213ENST00000598355 CLRN2A0PK11 232 aa19.87■□□□□ 0.77
TRIM28-213ENST00000598355 HSP90AB4PQ58FF6 505 aa19.87■□□□□ 0.77
TRIM28-213ENST00000598355 APOBEC3HQ6NTF7 200 aaKnown RBP19.87■□□□□ 0.77
TRIM28-213ENST00000598355 ZGPATQ8N5A5 531 aaKnown RBP19.87■□□□□ 0.77
TRIM28-213ENST00000598355 CAPNS2Q96L46 248 aa19.87■□□□□ 0.77
TRIM28-213ENST00000598355 DBNDD2Q9BQY9 259 aa19.87■□□□□ 0.77
TRIM28-213ENST00000598355 DEFB129Q9H1M3 183 aa19.87■□□□□ 0.77
TRIM28-213ENST00000598355 HMG20BQ9P0W2 317 aa19.87■□□□□ 0.77
TRIM28-213ENST00000598355 ZNF70Q9UC06 446 aaPredicted RBP19.87■□□□□ 0.77
TRIM28-213ENST00000598355 DBNLQ9UJU6 430 aaKnown RBP19.87■□□□□ 0.77
TRIM28-213ENST00000598355 ECE1P42892 770 aa19.86■□□□□ 0.77
TRIM28-213ENST00000598355 MCAMP43121 646 aa19.86■□□□□ 0.77
TRIM28-213ENST00000598355 RBM5P52756 815 aaKnown RBP eCLIP19.86■□□□□ 0.77
TRIM28-213ENST00000598355 HUNKP57058 714 aa19.86■□□□□ 0.77
TRIM28-213ENST00000598355 C2orf69Q8N8R5 385 aa19.86■□□□□ 0.77
TRIM28-213ENST00000598355 EAF2Q96CJ1 260 aaPredicted RBP19.86■□□□□ 0.77
TRIM28-213ENST00000598355 TDRD3Q9H7E2 651 aaKnown RBP19.86■□□□□ 0.77
TRIM28-213ENST00000598355 CDK5RAP2Q96SN8 1893 aa19.86■□□□□ 0.77
TRIM28-213ENST00000598355 RPAP1Q9BWH6 1393 aaPredicted RBP19.85■□□□□ 0.77
TRIM28-213ENST00000598355 GAKO14976 1311 aa19.85■□□□□ 0.77
TRIM28-213ENST00000598355 LDHBP07195 334 aaKnown RBP19.85■□□□□ 0.77
TRIM28-213ENST00000598355 UQCRFS1P1P0C7P4 283 aa19.85■□□□□ 0.77
TRIM28-213ENST00000598355 TNFAIP1Q13829 316 aa19.85■□□□□ 0.77
TRIM28-213ENST00000598355 CYP4F22Q6NT55 531 aa19.85■□□□□ 0.77
TRIM28-213ENST00000598355 RHPN1Q8TCX5 695 aa19.85■□□□□ 0.77
TRIM28-213ENST00000598355 TLR7Q9NYK1 1049 aaKnown RBP19.85■□□□□ 0.77
TRIM28-213ENST00000598355 DAGLAQ9Y4D2 1042 aa19.85■□□□□ 0.77
TRIM28-213ENST00000598355 FOCADQ5VW36 1801 aa19.85■□□□□ 0.77
TRIM28-213ENST00000598355 RFX7Q2KHR2 1363 aa19.84■□□□□ 0.77
TRIM28-213ENST00000598355 FKBP1CQ5VVH2 108 aa19.84■□□□□ 0.77
TRIM28-213ENST00000598355 PRAMEF18Q5VWM3 479 aa19.84■□□□□ 0.77
TRIM28-213ENST00000598355 PI16Q6UXB8 463 aa19.84■□□□□ 0.77
TRIM28-213ENST00000598355 SPATA5Q8NB90 893 aa19.84■□□□□ 0.77
TRIM28-213ENST00000598355 DIXDC1Q155Q3 683 aa19.83■□□□□ 0.77
TRIM28-213ENST00000598355 GORABQ5T7V8 394 aa19.83■□□□□ 0.77
TRIM28-213ENST00000598355 ZNF384Q8TF68 577 aa19.83■□□□□ 0.77
TRIM28-213ENST00000598355 KIF1BPQ96EK5 621 aa19.83■□□□□ 0.77
TRIM28-213ENST00000598355 TEPSINQ96N21 525 aa19.83■□□□□ 0.77
TRIM28-213ENST00000598355 VEZTQ9HBM0 779 aa19.83■□□□□ 0.77
TRIM28-213ENST00000598355 FAM155AB1AL88 458 aaPredicted RBP19.82■□□□□ 0.76
TRIM28-213ENST00000598355 NF2P35240 595 aa19.82■□□□□ 0.76
TRIM28-213ENST00000598355 RASA3Q14644 834 aa19.82■□□□□ 0.76
TRIM28-213ENST00000598355 MAP3K11Q16584 847 aa19.82■□□□□ 0.76
TRIM28-213ENST00000598355 RGMBQ6NW40 437 aa19.82■□□□□ 0.76
TRIM28-213ENST00000598355 FAM163AQ96GL9 167 aaPredicted RBP19.82■□□□□ 0.76
TRIM28-213ENST00000598355 RAB11FIP3O75154 756 aa19.81■□□□□ 0.76
TRIM28-213ENST00000598355 CCDC158Q5M9N0 1113 aa19.81■□□□□ 0.76
TRIM28-213ENST00000598355 SPTY2D1Q68D10 685 aaPredicted RBP19.81■□□□□ 0.76
TRIM28-213ENST00000598355 FAM83AQ86UY5 434 aa19.81■□□□□ 0.76
TRIM28-213ENST00000598355 IGSF3O75054 1194 aa19.8■□□□□ 0.76
TRIM28-213ENST00000598355 SLC10A3P09131 477 aa19.8■□□□□ 0.76
TRIM28-213ENST00000598355 HSPA1AP0DMV8 641 aaKnown RBP19.8■□□□□ 0.76
TRIM28-213ENST00000598355 HSPA1BP0DMV9 641 aaKnown RBP19.8■□□□□ 0.76
TRIM28-213ENST00000598355 MAP2K2P36507 400 aa19.8■□□□□ 0.76
TRIM28-213ENST00000598355 TTC39AQ5SRH9 613 aa19.8■□□□□ 0.76
TRIM28-213ENST00000598355 MOB2Q70IA6 237 aa19.8■□□□□ 0.76
TRIM28-213ENST00000598355 CCDC8Q9H0W5 538 aaPredicted RBP19.8■□□□□ 0.76
TRIM28-213ENST00000598355 MYH7P12883 1935 aa19.8■□□□□ 0.76
TRIM28-213ENST00000598355 AK9Q5TCS8 1911 aa19.8■□□□□ 0.76
TRIM28-213ENST00000598355 MECOMQ03112 1051 aa19.79■□□□□ 0.76
TRIM28-213ENST00000598355 NOGQ13253 232 aa19.79■□□□□ 0.76
TRIM28-213ENST00000598355 LDLRAD1Q5T700 205 aa19.79■□□□□ 0.76
TRIM28-213ENST00000598355 NBPF12Q5TAG4 269 aaPredicted RBP19.79■□□□□ 0.76
TRIM28-213ENST00000598355 AACSQ86V21 672 aa19.79■□□□□ 0.76
TRIM28-213ENST00000598355 RASAL3Q86YV0 1011 aa19.79■□□□□ 0.76
TRIM28-213ENST00000598355 IL1RAPL2Q9NP60 686 aa19.79■□□□□ 0.76
TRIM28-213ENST00000598355 WBP1LQ9NX94 342 aa19.79■□□□□ 0.76
TRIM28-213ENST00000598355 ABCF2Q9UG63 623 aa19.79■□□□□ 0.76
TRIM28-213ENST00000598355 MROH7-TTC4A0A0A0MT08 1334 aa19.78■□□□□ 0.76
TRIM28-213ENST00000598355 TCP10L2B9ZVM9 353 aa19.78■□□□□ 0.76
TRIM28-213ENST00000598355 TNNI2P48788 182 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms