RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 FBXL16Q8N461 479 aa20.09■□□□□ 0.81
ARHGEF1-213ENST00000595897 NCOA7Q8NI08 942 aa20.09■□□□□ 0.81
ARHGEF1-213ENST00000595897 H7C1W4 665 aa20.08■□□□□ 0.81
ARHGEF1-213ENST00000595897 WDHD1O75717 1129 aaPredicted RBP20.08■□□□□ 0.81
ARHGEF1-213ENST00000595897 CCDC158Q5M9N0 1113 aa20.08■□□□□ 0.81
ARHGEF1-213ENST00000595897 TMCO3Q6UWJ1 677 aa20.08■□□□□ 0.81
ARHGEF1-213ENST00000595897 ANKLE2Q86XL3 938 aa20.08■□□□□ 0.81
ARHGEF1-213ENST00000595897 TICAM2Q86XR7 235 aa20.08■□□□□ 0.81
ARHGEF1-213ENST00000595897 FAM177A1Q8N128 213 aaPredicted RBP20.08■□□□□ 0.81
ARHGEF1-213ENST00000595897 CEP126Q9P2H0 1117 aa20.08■□□□□ 0.81
ARHGEF1-213ENST00000595897 HPS5Q9UPZ3 1129 aa20.08■□□□□ 0.81
ARHGEF1-213ENST00000595897 CABP4P57796 275 aa20.08■□□□□ 0.8
ARHGEF1-213ENST00000595897 MYL5Q02045 173 aa20.08■□□□□ 0.8
ARHGEF1-213ENST00000595897 TTC39AQ5SRH9 613 aa20.08■□□□□ 0.8
ARHGEF1-213ENST00000595897 MROH7-TTC4A0A0A0MT08 1334 aa20.08■□□□□ 0.8
ARHGEF1-213ENST00000595897 FHOD1Q9Y613 1164 aa20.07■□□□□ 0.8
ARHGEF1-213ENST00000595897 MYH15Q9Y2K3 1946 aa20.07■□□□□ 0.8
ARHGEF1-213ENST00000595897 TOP1P11387 765 aaKnown RBP20.07■□□□□ 0.8
ARHGEF1-213ENST00000595897 SLC39A14Q15043 492 aa20.07■□□□□ 0.8
ARHGEF1-213ENST00000595897 KRT28Q7Z3Y7 464 aa20.07■□□□□ 0.8
ARHGEF1-213ENST00000595897 DCAF5Q96JK2 942 aa20.07■□□□□ 0.8
ARHGEF1-213ENST00000595897 ABCC6O95255 1503 aa20.07■□□□□ 0.8
ARHGEF1-213ENST00000595897 PHLPP2Q6ZVD8 1323 aa20.07■□□□□ 0.8
ARHGEF1-213ENST00000595897 ZNF213O14771 459 aa20.07■□□□□ 0.8
ARHGEF1-213ENST00000595897 PNMA6AP0CW24 399 aaPredicted RBP20.07■□□□□ 0.8
ARHGEF1-213ENST00000595897 PTPN21Q16825 1174 aa20.07■□□□□ 0.8
ARHGEF1-213ENST00000595897 OLFM4Q6UX06 510 aa20.07■□□□□ 0.8
ARHGEF1-213ENST00000595897 JMYQ8N9B5 988 aa20.07■□□□□ 0.8
ARHGEF1-213ENST00000595897 DPF2Q92785 391 aa20.07■□□□□ 0.8
ARHGEF1-213ENST00000595897 PUS3Q9BZE2 481 aaKnown RBP20.07■□□□□ 0.8
ARHGEF1-213ENST00000595897 LAMA4Q16363 1823 aa20.06■□□□□ 0.8
ARHGEF1-213ENST00000595897 GOLGA8FQ08AF8 430 aa20.06■□□□□ 0.8
ARHGEF1-213ENST00000595897 GOLGA8DPQ0D2H9 430 aa20.06■□□□□ 0.8
ARHGEF1-213ENST00000595897 PNOCQ13519 176 aa20.06■□□□□ 0.8
ARHGEF1-213ENST00000595897 PHRF1Q9P1Y6 1649 aaKnown RBP20.06■□□□□ 0.8
ARHGEF1-213ENST00000595897 MB21D2Q8IYB1 491 aaPredicted RBP20.06■□□□□ 0.8
ARHGEF1-213ENST00000595897 AIFM3Q96NN9 605 aa20.06■□□□□ 0.8
ARHGEF1-213ENST00000595897 C5P01031 1676 aa20.05■□□□□ 0.8
ARHGEF1-213ENST00000595897 TRDNQ13061 729 aa20.05■□□□□ 0.8
ARHGEF1-213ENST00000595897 ALG1Q9BT22 464 aa20.05■□□□□ 0.8
ARHGEF1-213ENST00000595897 TTLL7Q6ZT98 887 aa20.05■□□□□ 0.8
ARHGEF1-213ENST00000595897 VPS37DQ86XT2 251 aa20.05■□□□□ 0.8
ARHGEF1-213ENST00000595897 TIGD1Q96MW7 591 aa20.05■□□□□ 0.8
ARHGEF1-213ENST00000595897 CARD6Q9BX69 1037 aa20.05■□□□□ 0.8
ARHGEF1-213ENST00000595897 SRRTQ9BXP5 876 aaKnown RBP20.05■□□□□ 0.8
ARHGEF1-213ENST00000595897 ZBTB3Q9H5J0 574 aa20.05■□□□□ 0.8
ARHGEF1-213ENST00000595897 SIPA1L3O60292 1781 aaPredicted RBP20.05■□□□□ 0.8
ARHGEF1-213ENST00000595897 ZSCAN12O43309 604 aa20.04■□□□□ 0.8
ARHGEF1-213ENST00000595897 ZFYP08048 801 aaPredicted RBP20.04■□□□□ 0.8
ARHGEF1-213ENST00000595897 HSD3B7Q9H2F3 369 aa20.04■□□□□ 0.8
ARHGEF1-213ENST00000595897 ANTXR2P58335 489 aa20.04■□□□□ 0.8
ARHGEF1-213ENST00000595897 HSP90AA4PQ58FG1 418 aa20.04■□□□□ 0.8
ARHGEF1-213ENST00000595897 RXRAP19793 462 aa20.04■□□□□ 0.8
ARHGEF1-213ENST00000595897 TRIM65Q6PJ69 517 aa20.04■□□□□ 0.8
ARHGEF1-213ENST00000595897 TUBE1Q9UJT0 475 aa20.04■□□□□ 0.8
ARHGEF1-213ENST00000595897 FOXP2O15409 715 aa20.03■□□□□ 0.8
ARHGEF1-213ENST00000595897 PDILTQ8N807 584 aa20.03■□□□□ 0.8
ARHGEF1-213ENST00000595897 PUS7LQ9H0K6 701 aaKnown RBP20.03■□□□□ 0.8
ARHGEF1-213ENST00000595897 FANCLQ9NW38 375 aa20.03■□□□□ 0.8
ARHGEF1-213ENST00000595897 CYP27B1O15528 508 aa20.03■□□□□ 0.8
ARHGEF1-213ENST00000595897 CCDC57Q2TAC2 916 aa20.03■□□□□ 0.8
ARHGEF1-213ENST00000595897 SHC4Q6S5L8 630 aa20.03■□□□□ 0.8
ARHGEF1-213ENST00000595897 VSTM4Q8IW00 320 aa20.03■□□□□ 0.8
ARHGEF1-213ENST00000595897 TMEM232C9JQI7 657 aa20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 ADORA1P30542 326 aa20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 METAP2P50579 478 aaKnown RBP eCLIP20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 FAM193AP78312 1265 aa20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 CPLX2Q6PUV4 134 aaKnown RBP20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 CLIC6Q96NY7 704 aa20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 KIF13AQ9H1H9 1805 aa20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 NBPF26B4DH59 902 aa20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 POLR3GO15318 223 aaPredicted RBP20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 NBPF14Q5TI25 921 aa20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 NBPF10Q6P3W6 841 aaKnown RBP20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 CREBRFQ8IUR6 639 aa20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 NBPF15Q8N660 670 aa20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 CNNM3Q8NE01 707 aa20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 APPBP2Q92624 585 aa20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 XAGE2Q96GT9 111 aa20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 CCDC85AQ96PX6 553 aaPredicted RBP20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.02■□□□□ 0.8
ARHGEF1-213ENST00000595897 CCDC102BQ68D86 513 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 KRT40Q6A162 431 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 CALCOCO1Q9P1Z2 691 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 SLIT3O75094 1523 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 EFCAB8A8MWE9 144 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 GPAA1O43292 621 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 CDKL5O76039 1030 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 CIAO1O76071 339 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 PLA2G4AP47712 749 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 TEX35Q5T0J7 233 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 REXO1L1PQ8IX06 675 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 PHKBQ93100 1093 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 TMX1Q9H3N1 280 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 AFDNP55196 1824 aaKnown RBP20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 ARHGAP6O43182 974 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 PPP6R2O75170 966 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 TADA3O75528 432 aa20.01■□□□□ 0.79
ARHGEF1-213ENST00000595897 APPP05067 770 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms