RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.33■■□□□ 1.65
DNMT1-227ENST00000592342 ECHDC1Q9NTX5 307 aa25.33■■□□□ 1.65
DNMT1-227ENST00000592342 LRP2BPQ9P2M1 347 aa25.33■■□□□ 1.65
DNMT1-227ENST00000592342 SERPINA10Q9UK55 444 aa25.33■■□□□ 1.65
DNMT1-227ENST00000592342 CRKP46108 304 aa25.32■■□□□ 1.64
DNMT1-227ENST00000592342 TEKT1Q969V4 418 aa25.32■■□□□ 1.64
DNMT1-227ENST00000592342 DNAJC2Q99543 621 aaKnown RBP25.32■■□□□ 1.64
DNMT1-227ENST00000592342 RAI14Q9P0K7 980 aa25.32■■□□□ 1.64
DNMT1-227ENST00000592342 MYO1BO43795 1136 aa25.31■■□□□ 1.64
DNMT1-227ENST00000592342 ATP5JP18859 108 aa25.31■■□□□ 1.64
DNMT1-227ENST00000592342 HDLBPQ00341 1268 aaKnown RBP25.31■■□□□ 1.64
DNMT1-227ENST00000592342 DCPSQ96C86 337 aaKnown RBP25.31■■□□□ 1.64
DNMT1-227ENST00000592342 LNPKQ9C0E8 428 aa25.31■■□□□ 1.64
DNMT1-227ENST00000592342 BOLA2Q9H3K6 86 aa25.31■■□□□ 1.64
DNMT1-227ENST00000592342 WNT10BO00744 389 aa25.3■■□□□ 1.64
DNMT1-227ENST00000592342 CYP2E1P05181 493 aaPredicted RBP25.3■■□□□ 1.64
DNMT1-227ENST00000592342 NBPF9Q3BBW0 867 aa25.3■■□□□ 1.64
DNMT1-227ENST00000592342 MAP1SQ66K74 1059 aaPredicted RBP25.3■■□□□ 1.64
DNMT1-227ENST00000592342 CHD1LQ86WJ1 897 aa25.3■■□□□ 1.64
DNMT1-227ENST00000592342 NDUFB9Q9Y6M9 179 aa25.3■■□□□ 1.64
DNMT1-227ENST00000592342 NUCB1Q02818 461 aa25.29■■□□□ 1.64
DNMT1-227ENST00000592342 FSTL1Q12841 308 aa25.29■■□□□ 1.64
DNMT1-227ENST00000592342 SLF2Q8IX21 1173 aa25.29■■□□□ 1.64
DNMT1-227ENST00000592342 MTMR14Q8NCE2 650 aa25.29■■□□□ 1.64
DNMT1-227ENST00000592342 MRIQ9BWK5 157 aa25.29■■□□□ 1.64
DNMT1-227ENST00000592342 GGA3Q9NZ52 723 aa25.29■■□□□ 1.64
DNMT1-227ENST00000592342 SPDYE2BA6NHP3 402 aa25.28■■□□□ 1.64
DNMT1-227ENST00000592342 ERC2O15083 957 aa25.28■■□□□ 1.64
DNMT1-227ENST00000592342 SPDYE6P0CI01 402 aa25.28■■□□□ 1.64
DNMT1-227ENST00000592342 MX1P20591 662 aa25.28■■□□□ 1.64
DNMT1-227ENST00000592342 TTF1Q15361 905 aaPredicted RBP25.28■■□□□ 1.64
DNMT1-227ENST00000592342 ANGEL2Q5VTE6 544 aaKnown RBP25.28■■□□□ 1.64
DNMT1-227ENST00000592342 HHIPL2Q6UWX4 724 aa25.28■■□□□ 1.64
DNMT1-227ENST00000592342 CNTROBQ8N137 903 aa25.28■■□□□ 1.64
DNMT1-227ENST00000592342 PCDHAC2Q9Y5I4 1007 aa25.28■■□□□ 1.64
DNMT1-227ENST00000592342 TTC41PQ6P2S7 1318 aa25.28■■□□□ 1.64
DNMT1-227ENST00000592342 DIXDC1Q155Q3 683 aa25.27■■□□□ 1.64
DNMT1-227ENST00000592342 OTUD7AQ8TE49 926 aaPredicted RBP25.27■■□□□ 1.64
DNMT1-227ENST00000592342 PGAP2Q9UHJ9 254 aa25.27■■□□□ 1.64
DNMT1-227ENST00000592342 ADAMTSL1Q8N6G6 1762 aa25.26■■□□□ 1.63
DNMT1-227ENST00000592342 GOLIM4O00461 696 aa25.26■■□□□ 1.63
DNMT1-227ENST00000592342 IDH1O75874 414 aaKnown RBP25.26■■□□□ 1.63
DNMT1-227ENST00000592342 GSTO1P78417 241 aa25.26■■□□□ 1.63
DNMT1-227ENST00000592342 MECOMQ03112 1051 aa25.26■■□□□ 1.63
DNMT1-227ENST00000592342 TSHZ3Q63HK5 1081 aa25.26■■□□□ 1.63
DNMT1-227ENST00000592342 ZBED3Q96IU2 234 aaPredicted RBP25.26■■□□□ 1.63
DNMT1-227ENST00000592342 CCDC136Q96JN2 1154 aa25.26■■□□□ 1.63
DNMT1-227ENST00000592342 PRMT6Q96LA8 375 aaPredicted RBP25.26■■□□□ 1.63
DNMT1-227ENST00000592342 PIH1D3Q9NQM4 214 aaKnown RBP25.26■■□□□ 1.63
DNMT1-227ENST00000592342 ASTN2O75129 1339 aaPredicted RBP25.26■■□□□ 1.63
DNMT1-227ENST00000592342 LDHCP07864 332 aa25.25■■□□□ 1.63
DNMT1-227ENST00000592342 CDC37L1Q7L3B6 337 aa25.25■■□□□ 1.63
DNMT1-227ENST00000592342 SULF1Q8IWU6 871 aa25.25■■□□□ 1.63
DNMT1-227ENST00000592342 ZDHHC15Q96MV8 337 aa25.25■■□□□ 1.63
DNMT1-227ENST00000592342 HAUS7Q99871 368 aa25.25■■□□□ 1.63
DNMT1-227ENST00000592342 ANTXR1Q9H6X2 564 aa25.25■■□□□ 1.63
DNMT1-227ENST00000592342 PAG1Q9NWQ8 432 aa25.25■■□□□ 1.63
DNMT1-227ENST00000592342 AKAP11Q9UKA4 1901 aa25.24■■□□□ 1.63
DNMT1-227ENST00000592342 IGSF3O75054 1194 aa25.24■■□□□ 1.63
DNMT1-227ENST00000592342 MAP3K12Q12852 859 aa25.24■■□□□ 1.63
DNMT1-227ENST00000592342 KRT26Q7Z3Y9 468 aa25.24■■□□□ 1.63
DNMT1-227ENST00000592342 NSUN4Q96CB9 384 aaKnown RBP25.24■■□□□ 1.63
DNMT1-227ENST00000592342 DAGLAQ9Y4D2 1042 aa25.24■■□□□ 1.63
DNMT1-227ENST00000592342 PITPNM2Q9BZ72 1349 aa25.23■■□□□ 1.63
DNMT1-227ENST00000592342 CLRN2A0PK11 232 aa25.23■■□□□ 1.63
DNMT1-227ENST00000592342 GLRX3O76003 335 aaKnown RBP25.23■■□□□ 1.63
DNMT1-227ENST00000592342 C1QTNF8P60827 252 aa25.23■■□□□ 1.63
DNMT1-227ENST00000592342 NAA16Q6N069 864 aaPredicted RBP25.23■■□□□ 1.63
DNMT1-227ENST00000592342 GLIS2Q9BZE0 524 aaPredicted RBP25.23■■□□□ 1.63
DNMT1-227ENST00000592342 TDRD3Q9H7E2 651 aaKnown RBP25.23■■□□□ 1.63
DNMT1-227ENST00000592342 VEZTQ9HBM0 779 aa25.23■■□□□ 1.63
DNMT1-227ENST00000592342 TMOD2Q9NZR1 351 aa25.23■■□□□ 1.63
DNMT1-227ENST00000592342 ERICH6BQ5W0A0 696 aa25.22■■□□□ 1.63
DNMT1-227ENST00000592342 USP48Q86UV5 1035 aa25.22■■□□□ 1.63
DNMT1-227ENST00000592342 APOBEC3FQ8IUX4 373 aaKnown RBP25.22■■□□□ 1.63
DNMT1-227ENST00000592342 MROH7-TTC4A0A0A0MT08 1334 aa25.21■■□□□ 1.63
DNMT1-227ENST00000592342 CENPQQ7L2Z9 268 aaPredicted RBP25.21■■□□□ 1.63
DNMT1-227ENST00000592342 EDC3Q96F86 508 aaKnown RBP25.21■■□□□ 1.63
DNMT1-227ENST00000592342 NOL10Q9BSC4 688 aaKnown RBP25.21■■□□□ 1.63
DNMT1-227ENST00000592342 ZNF70Q9UC06 446 aaPredicted RBP25.21■■□□□ 1.63
DNMT1-227ENST00000592342 SALL3Q9BXA9 1300 aa25.2■■□□□ 1.62
DNMT1-227ENST00000592342 PDE1AP54750 535 aa25.2■■□□□ 1.62
DNMT1-227ENST00000592342 SPDYE2Q495Y8 402 aa25.2■■□□□ 1.62
DNMT1-227ENST00000592342 APOBEC3HQ6NTF7 200 aaKnown RBP25.2■■□□□ 1.62
DNMT1-227ENST00000592342 GAKO14976 1311 aa25.19■■□□□ 1.62
DNMT1-227ENST00000592342 ADM5C9JUS6 153 aa25.19■■□□□ 1.62
DNMT1-227ENST00000592342 ITGBL1O95965 494 aaPredicted RBP25.19■■□□□ 1.62
DNMT1-227ENST00000592342 BTDP43251 543 aa25.19■■□□□ 1.62
DNMT1-227ENST00000592342 MAGEB6Q8N7X4 407 aa25.19■■□□□ 1.62
DNMT1-227ENST00000592342 PI4K2BQ8TCG2 481 aa25.19■■□□□ 1.62
DNMT1-227ENST00000592342 FAM163AQ96GL9 167 aaPredicted RBP25.19■■□□□ 1.62
DNMT1-227ENST00000592342 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.19■■□□□ 1.623e-6■□□□□ 8.5
DNMT1-227ENST00000592342 STAP2Q9UGK3 403 aa25.19■■□□□ 1.62
DNMT1-227ENST00000592342 SCAF8Q9UPN6 1271 aaKnown RBP25.19■■□□□ 1.62
DNMT1-227ENST00000592342 AOX1Q06278 1338 aa25.18■■□□□ 1.62
DNMT1-227ENST00000592342 CYP7A1P22680 504 aa25.18■■□□□ 1.62
DNMT1-227ENST00000592342 TNFAIP1Q13829 316 aa25.18■■□□□ 1.62
DNMT1-227ENST00000592342 USP40Q9NVE5 1235 aa25.18■■□□□ 1.62
DNMT1-227ENST00000592342 TRAF5O00463 557 aa25.17■■□□□ 1.62
DNMT1-227ENST00000592342 MAP4K4O95819 1239 aaPredicted RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms