RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 SNRKQ9NRH2 765 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 RNF113AO15541 343 aaKnown RBP8.24□□□□□ -1.09
CDH8-214ENST00000585315 PPFIA3O75145 1194 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 TSNAXIP1Q2TAA8 658 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 C8orf74Q6P047 294 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDH8-214ENST00000585315 GABPB2Q8TAK5 448 aaPredicted RBP8.24□□□□□ -1.09
CDH8-214ENST00000585315 HELLSQ9NRZ9 838 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 FAM184BQ9ULE4 1060 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 GOLGA6CA6NDK9 693 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 SPDYE3A6NKU9 549 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 GOLGA6DP0CG33 693 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 ERCC6LQ2NKX8 1250 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 INTS8Q75QN2 995 aaKnown RBP8.24□□□□□ -1.09
CDH8-214ENST00000585315 GOLGA6AQ9NYA3 693 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 IBSPP21815 317 aaPredicted RBP8.23□□□□□ -1.09
CDH8-214ENST00000585315 RASSF2P50749 326 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 BRD3Q15059 726 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 TAOK1Q7L7X3 1001 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 ZBTB3Q9H5J0 574 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 SSH2Q76I76 1423 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 NBPF6Q5VWK0 638 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 CADPS2Q86UW7 1296 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 NBPF4Q96M43 638 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 NAPAP54920 295 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 MTMR3Q13615 1198 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 CNNM4Q6P4Q7 775 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 DHX37Q8IY37 1157 aaKnown RBP8.23□□□□□ -1.09
CDH8-214ENST00000585315 IGSF22Q8N9C0 903 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 DHX58Q96C10 678 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 LARP6Q9BRS8 491 aaKnown RBP8.23□□□□□ -1.09
CDH8-214ENST00000585315 EXOC5O00471 708 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 AKAP4Q5JQC9 854 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 CLSTN2Q9H4D0 955 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 AMOTL2Q9Y2J4 779 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 PPFIA4O75335 1185 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 CCDC65Q8IXS2 484 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 CCDC144CPQ8IYA2 1237 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 KDM5BQ9UGL1 1544 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 PHACTR2O75167 634 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 TBC1D8BQ0IIM8 1120 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 PAK2Q13177 524 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 FCHSD1Q86WN1 690 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 PUF60Q9UHX1 559 aaKnown RBP8.23□□□□□ -1.09
CDH8-214ENST00000585315 MAPKBP1O60336 1514 aa8.23□□□□□ -1.09
CDH8-214ENST00000585315 ZNF500O60304 480 aaPredicted RBP8.22□□□□□ -1.09
CDH8-214ENST00000585315 PLCB3Q01970 1234 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 GSTA5Q7RTV2 222 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 BICD1Q96G01 975 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 DDX23Q9BUQ8 820 aaKnown RBP8.22□□□□□ -1.09
CDH8-214ENST00000585315 CUTAO60888 179 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 SEL1L2Q5TEA6 688 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 TSHZ3Q63HK5 1081 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 CHPF2Q9P2E5 772 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 TMX1Q9H3N1 280 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 DEXIO95424 95 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 LMBR1LQ6UX01 489 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 NOX5Q96PH1 765 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 KCNH3Q9ULD8 1083 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 KIF24Q5T7B8 1368 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 GOLGA6BA6NDN3 693 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 CYP7A1P22680 504 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 NMIQ13287 307 aaPredicted RBP8.22□□□□□ -1.09
CDH8-214ENST00000585315 FYB2Q5VWT5 728 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 RRP36Q96EU6 259 aaKnown RBP8.22□□□□□ -1.09
CDH8-214ENST00000585315 PAIP2Q9BPZ3 127 aaKnown RBP8.22□□□□□ -1.09
CDH8-214ENST00000585315 MED4Q9NPJ6 270 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 SLC4A4Q9Y6R1 1079 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 RHOXF2BP0C7M4 288 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 UBL4BQ8N7F7 174 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 RHOXF2Q9BQY4 288 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 PPIP5K1Q6PFW1 1433 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 ZNF75DP51815 510 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 PPP1R7Q15435 360 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 KIFAP3Q92845 792 aa8.22□□□□□ -1.09
CDH8-214ENST00000585315 ANGEL1Q9UNK9 670 aaKnown RBP8.22□□□□□ -1.09
CDH8-214ENST00000585315 FOXO3O43524 673 aa8.21□□□□□ -1.09
CDH8-214ENST00000585315 ATP2C2O75185 946 aa8.21□□□□□ -1.09
CDH8-214ENST00000585315 SLC9C1Q4G0N8 1177 aa8.21□□□□□ -1.09
CDH8-214ENST00000585315 CABS1Q96KC9 395 aa8.21□□□□□ -1.09
CDH8-214ENST00000585315 RNF123Q5XPI4 1314 aa8.21□□□□□ -1.09
CDH8-214ENST00000585315 C6orf229H3BNL8 230 aa8.21□□□□□ -1.09
CDH8-214ENST00000585315 ANO1Q5XXA6 986 aa8.21□□□□□ -1.09
CDH8-214ENST00000585315 TCEANC2Q96MN5 208 aa8.21□□□□□ -1.09
CDH8-214ENST00000585315 BCAP29Q9UHQ4 241 aa8.21□□□□□ -1.09
CDH8-214ENST00000585315 GPATCH8Q9UKJ3 1502 aaKnown RBP8.21□□□□□ -1.09
CDH8-214ENST00000585315 GRIN2AQ12879 1464 aa8.21□□□□□ -1.09
CDH8-214ENST00000585315 FLOT1O75955 427 aa8.21□□□□□ -1.09
CDH8-214ENST00000585315 IFT81Q8WYA0 676 aa8.21□□□□□ -1.09
CDH8-214ENST00000585315 VCXQ9H320 206 aa8.21□□□□□ -1.09
CDH8-214ENST00000585315 ACEP12821 1306 aa8.21□□□□□ -1.09
CDH8-214ENST00000585315 SYCE1Q8N0S2 351 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 XAGE3Q8WTP9 111 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 CIB2O75838 187 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 CFAP221Q4G0U5 840 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 HAUS3Q68CZ6 603 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 PHLDB2Q86SQ0 1253 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 FRMD4BQ9Y2L6 1034 aa8.21□□□□□ -1.1
CDH8-214ENST00000585315 UTP11Q9Y3A2 253 aaKnown RBP8.21□□□□□ -1.1
CDH8-214ENST00000585315 PLB1Q6P1J6 1458 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 828.8 ms