RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 ZNF532Q9HCE3 1301 aa20.15■□□□□ 0.82
CDK5RAP3-230ENST00000584042 MYH2Q9UKX2 1941 aa20.14■□□□□ 0.81
CDK5RAP3-230ENST00000584042 MYO3BQ8WXR4 1341 aa20.14■□□□□ 0.81
CDK5RAP3-230ENST00000584042 DACT2Q5SW24 774 aa20.14■□□□□ 0.81
CDK5RAP3-230ENST00000584042 FBXW7Q969H0 707 aa20.14■□□□□ 0.81
CDK5RAP3-230ENST00000584042 IL25Q9H293 177 aa20.14■□□□□ 0.81
CDK5RAP3-230ENST00000584042 CCDC171Q6TFL3 1326 aa20.13■□□□□ 0.81
CDK5RAP3-230ENST00000584042 EPB41L2O43491 1005 aaKnown RBP20.13■□□□□ 0.81
CDK5RAP3-230ENST00000584042 CHGBP05060 677 aa20.13■□□□□ 0.81
CDK5RAP3-230ENST00000584042 LMNB1P20700 586 aa20.13■□□□□ 0.81
CDK5RAP3-230ENST00000584042 MECOMQ03112 1051 aa20.13■□□□□ 0.81
CDK5RAP3-230ENST00000584042 MCMDC2Q4G0Z9 681 aa20.13■□□□□ 0.81
CDK5RAP3-230ENST00000584042 NAA16Q6N069 864 aaPredicted RBP20.13■□□□□ 0.81
CDK5RAP3-230ENST00000584042 ARHGAP27Q6ZUM4 889 aa20.13■□□□□ 0.81
CDK5RAP3-230ENST00000584042 PRELPP51888 382 aa20.12■□□□□ 0.81
CDK5RAP3-230ENST00000584042 MFAP1P55081 439 aaKnown RBP20.12■□□□□ 0.81
CDK5RAP3-230ENST00000584042 GSTO1P78417 241 aa20.12■□□□□ 0.81
CDK5RAP3-230ENST00000584042 CERS5Q8N5B7 392 aa20.12■□□□□ 0.81
CDK5RAP3-230ENST00000584042 ZNF384Q8TF68 577 aa20.12■□□□□ 0.81
CDK5RAP3-230ENST00000584042 M0R2C6 588 aa20.11■□□□□ 0.81
CDK5RAP3-230ENST00000584042 SEC24BO95487 1268 aa20.11■□□□□ 0.81
CDK5RAP3-230ENST00000584042 ZNF589Q86UQ0 364 aaPredicted RBP20.11■□□□□ 0.81
CDK5RAP3-230ENST00000584042 OSBP2Q969R2 916 aa20.11■□□□□ 0.81
CDK5RAP3-230ENST00000584042 UPF2Q9HAU5 1272 aaKnown RBP20.11■□□□□ 0.81
CDK5RAP3-230ENST00000584042 ADAMTSL1Q8N6G6 1762 aa20.11■□□□□ 0.81
CDK5RAP3-230ENST00000584042 MROH7-TTC4A0A0A0MT08 1334 aa20.1■□□□□ 0.81
CDK5RAP3-230ENST00000584042 CYP7A1P22680 504 aa20.1■□□□□ 0.81
CDK5RAP3-230ENST00000584042 GRIK5Q16478 980 aa20.1■□□□□ 0.81
CDK5RAP3-230ENST00000584042 SLFNL1Q499Z3 407 aa20.1■□□□□ 0.81
CDK5RAP3-230ENST00000584042 SLF2Q8IX21 1173 aa20.1■□□□□ 0.81
CDK5RAP3-230ENST00000584042 SEC62Q99442 399 aaKnown RBP20.1■□□□□ 0.81
CDK5RAP3-230ENST00000584042 KCNQ5Q9NR82 932 aa20.1■□□□□ 0.81
CDK5RAP3-230ENST00000584042 GAKO14976 1311 aa20.09■□□□□ 0.81
CDK5RAP3-230ENST00000584042 FZD9O00144 591 aa20.09■□□□□ 0.81
CDK5RAP3-230ENST00000584042 GPAA1O43292 621 aa20.09■□□□□ 0.81
CDK5RAP3-230ENST00000584042 RSBN1LQ6PCB5 846 aaPredicted RBP20.09■□□□□ 0.81
CDK5RAP3-230ENST00000584042 PUS7LQ9H0K6 701 aaKnown RBP20.09■□□□□ 0.81
CDK5RAP3-230ENST00000584042 ANO2Q9NQ90 1003 aa20.09■□□□□ 0.81
CDK5RAP3-230ENST00000584042 SRCAPQ6ZRS2 3230 aa20.09■□□□□ 0.81
CDK5RAP3-230ENST00000584042 PSMD14O00487 310 aa20.08■□□□□ 0.81
CDK5RAP3-230ENST00000584042 GRIN3BO60391 1043 aa20.08■□□□□ 0.81
CDK5RAP3-230ENST00000584042 LDHCP07864 332 aa20.08■□□□□ 0.81
CDK5RAP3-230ENST00000584042 VIL1P09327 827 aaKnown RBP20.08■□□□□ 0.81
CDK5RAP3-230ENST00000584042 CIAPIN1Q6FI81 312 aa20.08■□□□□ 0.81
CDK5RAP3-230ENST00000584042 KIAA1211Q6ZU35 1233 aa20.08■□□□□ 0.81
CDK5RAP3-230ENST00000584042 ADGRA1Q86SQ6 560 aa20.08■□□□□ 0.81
CDK5RAP3-230ENST00000584042 CERS3Q8IU89 383 aa20.08■□□□□ 0.81
CDK5RAP3-230ENST00000584042 AIDAQ96BJ3 306 aa20.08■□□□□ 0.81
CDK5RAP3-230ENST00000584042 LSG1Q9H089 658 aaKnown RBP20.08■□□□□ 0.81
CDK5RAP3-230ENST00000584042 LAMA4Q16363 1823 aa20.08■□□□□ 0.8
CDK5RAP3-230ENST00000584042 FOCADQ5VW36 1801 aa20.07■□□□□ 0.8
CDK5RAP3-230ENST00000584042 RAD17O75943 681 aa20.07■□□□□ 0.8
CDK5RAP3-230ENST00000584042 MBD4O95243 580 aa20.07■□□□□ 0.8
CDK5RAP3-230ENST00000584042 EIF6P56537 245 aaKnown RBP20.07■□□□□ 0.8
CDK5RAP3-230ENST00000584042 HDLBPQ00341 1268 aaKnown RBP20.07■□□□□ 0.8
CDK5RAP3-230ENST00000584042 CXCL9Q07325 125 aa20.07■□□□□ 0.8
CDK5RAP3-230ENST00000584042 GPR162Q16538 588 aa20.07■□□□□ 0.8
CDK5RAP3-230ENST00000584042 CCDC129Q6ZRS4 1044 aa20.07■□□□□ 0.8
CDK5RAP3-230ENST00000584042 FAM163AQ96GL9 167 aaPredicted RBP20.07■□□□□ 0.8
CDK5RAP3-230ENST00000584042 RIOK1Q9BRS2 568 aaKnown RBP20.07■□□□□ 0.8
CDK5RAP3-230ENST00000584042 MXD3Q9BW11 206 aa20.07■□□□□ 0.8
CDK5RAP3-230ENST00000584042 TTF2Q9UNY4 1162 aaKnown RBP20.07■□□□□ 0.8
CDK5RAP3-230ENST00000584042 CDK5RAP2Q96SN8 1893 aa20.07■□□□□ 0.8
CDK5RAP3-230ENST00000584042 TNIP1Q15025 636 aa20.06■□□□□ 0.8
CDK5RAP3-230ENST00000584042 DIXDC1Q155Q3 683 aa20.06■□□□□ 0.8
CDK5RAP3-230ENST00000584042 AGBL3Q8NEM8 1001 aa20.06■□□□□ 0.8
CDK5RAP3-230ENST00000584042 NAV1Q8NEY1 1877 aa20.06■□□□□ 0.8
CDK5RAP3-230ENST00000584042 GMLQ99445 158 aa20.06■□□□□ 0.8
CDK5RAP3-230ENST00000584042 DSCC1Q9BVC3 393 aa20.06■□□□□ 0.8
CDK5RAP3-230ENST00000584042 ECM29Q5VYK3 1845 aa20.06■□□□□ 0.8
CDK5RAP3-230ENST00000584042 RPAP1Q9BWH6 1393 aaPredicted RBP20.06■□□□□ 0.8
CDK5RAP3-230ENST00000584042 ZC3H4Q9UPT8 1303 aaKnown RBP20.05■□□□□ 0.8
CDK5RAP3-230ENST00000584042 DDX60LQ5H9U9 1706 aaKnown RBP20.05■□□□□ 0.8
CDK5RAP3-230ENST00000584042 MAGEB6P1A0A0J9YX57 407 aa20.05■□□□□ 0.8
CDK5RAP3-230ENST00000584042 GNAT2P19087 354 aa20.05■□□□□ 0.8
CDK5RAP3-230ENST00000584042 RPS12P25398 132 aaKnown RBP20.05■□□□□ 0.8
CDK5RAP3-230ENST00000584042 HHIPL2Q6UWX4 724 aa20.05■□□□□ 0.8
CDK5RAP3-230ENST00000584042 NOL10Q9BSC4 688 aaKnown RBP20.05■□□□□ 0.8
CDK5RAP3-230ENST00000584042 USP26Q9BXU7 913 aa20.05■□□□□ 0.8
CDK5RAP3-230ENST00000584042 LAMB1P07942 1786 aa20.05■□□□□ 0.8
CDK5RAP3-230ENST00000584042 ZMYM6O95789 1325 aa20.04■□□□□ 0.8
CDK5RAP3-230ENST00000584042 MMP14P50281 582 aa20.04■□□□□ 0.8
CDK5RAP3-230ENST00000584042 PPP4CP60510 307 aa20.04■□□□□ 0.8
CDK5RAP3-230ENST00000584042 KIAA0825Q8IV33 1275 aa20.04■□□□□ 0.8
CDK5RAP3-230ENST00000584042 LCORLQ8N3X6 602 aa20.04■□□□□ 0.8
CDK5RAP3-230ENST00000584042 MIGA1Q8NAN2 632 aa20.04■□□□□ 0.8
CDK5RAP3-230ENST00000584042 TEKT1Q969V4 418 aa20.04■□□□□ 0.8
CDK5RAP3-230ENST00000584042 STRBPQ96SI9 672 aaKnown RBP20.04■□□□□ 0.8
CDK5RAP3-230ENST00000584042 MRIQ9BWK5 157 aa20.04■□□□□ 0.8
CDK5RAP3-230ENST00000584042 DAGLAQ9Y4D2 1042 aa20.04■□□□□ 0.8
CDK5RAP3-230ENST00000584042 ZNF541Q9H0D2 1346 aa20.03■□□□□ 0.8
CDK5RAP3-230ENST00000584042 GPR75-ASB3A0A0A6YYF3 556 aa20.03■□□□□ 0.8
CDK5RAP3-230ENST00000584042 F8W031 263 aaPredicted RBP20.03■□□□□ 0.8
CDK5RAP3-230ENST00000584042 BAG3O95817 575 aa20.03■□□□□ 0.8
CDK5RAP3-230ENST00000584042 PTH1RQ03431 593 aa20.03■□□□□ 0.8
CDK5RAP3-230ENST00000584042 TBC1D32Q96NH3 1257 aa20.03■□□□□ 0.8
CDK5RAP3-230ENST00000584042 ARMT1Q9H993 441 aa20.03■□□□□ 0.8
CDK5RAP3-230ENST00000584042 AATFQ9NY61 560 aaKnown RBP eCLIP20.03■□□□□ 0.8
CDK5RAP3-230ENST00000584042 RNF181Q9P0P0 153 aa20.03■□□□□ 0.8
CDK5RAP3-230ENST00000584042 SERPINA10Q9UK55 444 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms