RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 RBM5P52756 815 aaKnown RBP eCLIP24.82■■□□□ 1.56
SS18-218ENST00000581021 DENND2AQ9ULE3 1009 aa24.82■■□□□ 1.56
SS18-218ENST00000581021 SALL1Q9NSC2 1324 aa24.82■■□□□ 1.56
SS18-218ENST00000581021 APOBEC3FQ8IUX4 373 aaKnown RBP24.81■■□□□ 1.56
SS18-218ENST00000581021 EAF2Q96CJ1 260 aaPredicted RBP24.81■■□□□ 1.56
SS18-218ENST00000581021 DBNLQ9UJU6 430 aaKnown RBP24.81■■□□□ 1.56
SS18-218ENST00000581021 SUGT1Q9Y2Z0 365 aa24.81■■□□□ 1.56
SS18-218ENST00000581021 PDS5AQ29RF7 1337 aaKnown RBP24.81■■□□□ 1.56
SS18-218ENST00000581021 ARID4AP29374 1257 aaPredicted RBP24.8■■□□□ 1.56
SS18-218ENST00000581021 SPDYE2Q495Y8 402 aa24.8■■□□□ 1.56
SS18-218ENST00000581021 GBA2Q9HCG7 927 aaPredicted RBP24.8■■□□□ 1.56
SS18-218ENST00000581021 HMG20BQ9P0W2 317 aa24.8■■□□□ 1.56
SS18-218ENST00000581021 SSC5DA1L4H1 1573 aa24.8■■□□□ 1.56
SS18-218ENST00000581021 HDLBPQ00341 1268 aaKnown RBP24.79■■□□□ 1.56
SS18-218ENST00000581021 DIXDC1Q155Q3 683 aa24.79■■□□□ 1.56
SS18-218ENST00000581021 DEFB115Q30KQ5 88 aa24.79■■□□□ 1.56
SS18-218ENST00000581021 CHMP4BQ9H444 224 aaKnown RBP24.79■■□□□ 1.56
SS18-218ENST00000581021 TDRD3Q9H7E2 651 aaKnown RBP24.79■■□□□ 1.56
SS18-218ENST00000581021 ZNF70Q9UC06 446 aaPredicted RBP24.79■■□□□ 1.56
SS18-218ENST00000581021 MCAMP43121 646 aa24.78■■□□□ 1.56
SS18-218ENST00000581021 CYP4F22Q6NT55 531 aa24.78■■□□□ 1.56
SS18-218ENST00000581021 APOBEC3HQ6NTF7 200 aaKnown RBP24.78■■□□□ 1.56
SS18-218ENST00000581021 TEKT1Q969V4 418 aa24.78■■□□□ 1.56
SS18-218ENST00000581021 DEFB129Q9H1M3 183 aa24.78■■□□□ 1.56
SS18-218ENST00000581021 VEZTQ9HBM0 779 aa24.78■■□□□ 1.56
SS18-218ENST00000581021 THSD7BQ9C0I4 1608 aa24.78■■□□□ 1.56
SS18-218ENST00000581021 GORABQ5T7V8 394 aa24.77■■□□□ 1.56
SS18-218ENST00000581021 MOB2Q70IA6 237 aa24.77■■□□□ 1.56
SS18-218ENST00000581021 ZDHHC15Q96MV8 337 aa24.77■■□□□ 1.56
SS18-218ENST00000581021 CCDC8Q9H0W5 538 aaPredicted RBP24.77■■□□□ 1.56
SS18-218ENST00000581021 PAPPA2Q9BXP8 1791 aa24.77■■□□□ 1.56
SS18-218ENST00000581021 HMMRO75330 724 aa24.76■■□□□ 1.55
SS18-218ENST00000581021 HUNKP57058 714 aa24.76■■□□□ 1.55
SS18-218ENST00000581021 CDAN1Q8IWY9 1227 aa24.76■■□□□ 1.55
SS18-218ENST00000581021 SPATA5Q8NB90 893 aa24.76■■□□□ 1.55
SS18-218ENST00000581021 RHPN1Q8TCX5 695 aa24.76■■□□□ 1.55
SS18-218ENST00000581021 ZNF384Q8TF68 577 aa24.76■■□□□ 1.55
SS18-218ENST00000581021 CAPNS2Q96L46 248 aa24.76■■□□□ 1.55
SS18-218ENST00000581021 MRIQ9BWK5 157 aa24.76■■□□□ 1.55
SS18-218ENST00000581021 IL1RAPL2Q9NP60 686 aa24.76■■□□□ 1.55
SS18-218ENST00000581021 DAGLAQ9Y4D2 1042 aa24.76■■□□□ 1.55
SS18-218ENST00000581021 MAST3O60307 1309 aa24.76■■□□□ 1.55
SS18-218ENST00000581021 APBB1O00213 710 aa24.75■■□□□ 1.55
SS18-218ENST00000581021 MYO1BO43795 1136 aa24.75■■□□□ 1.55
SS18-218ENST00000581021 LDHBP07195 334 aaKnown RBP24.75■■□□□ 1.55
SS18-218ENST00000581021 CACNB3P54284 484 aa24.75■■□□□ 1.55
SS18-218ENST00000581021 HHIPL2Q6UWX4 724 aa24.75■■□□□ 1.55
SS18-218ENST00000581021 TBC1D9Q6ZT07 1266 aa24.75■■□□□ 1.55
SS18-218ENST00000581021 ERC1Q8IUD2 1116 aa24.75■■□□□ 1.55
SS18-218ENST00000581021 CRBNQ96SW2 442 aa24.75■■□□□ 1.55
SS18-218ENST00000581021 WDR33Q9C0J8 1336 aaKnown RBP24.75■■□□□ 1.55
SS18-218ENST00000581021 AKAP11Q9UKA4 1901 aa24.74■■□□□ 1.55
SS18-218ENST00000581021 PAXIP1Q6ZW49 1069 aaPredicted RBP24.74■■□□□ 1.55
SS18-218ENST00000581021 FZD1Q9UP38 647 aa24.74■■□□□ 1.55
SS18-218ENST00000581021 PCDHB15Q9Y5E8 787 aa24.74■■□□□ 1.55
SS18-218ENST00000581021 GRM1Q13255 1194 aa24.73■■□□□ 1.55
SS18-218ENST00000581021 RASA3Q14644 834 aa24.73■■□□□ 1.55
SS18-218ENST00000581021 AACSQ86V21 672 aa24.73■■□□□ 1.55
SS18-218ENST00000581021 C2orf69Q8N8R5 385 aa24.73■■□□□ 1.55
SS18-218ENST00000581021 HHIPL1Q96JK4 782 aa24.73■■□□□ 1.55
SS18-218ENST00000581021 SNRKQ9NRH2 765 aa24.73■■□□□ 1.55
SS18-218ENST00000581021 ABCF2Q9UG63 623 aa24.73■■□□□ 1.55
SS18-218ENST00000581021 UQCRFS1P1P0C7P4 283 aa24.72■■□□□ 1.55
SS18-218ENST00000581021 HSP90AB4PQ58FF6 505 aa24.72■■□□□ 1.55
SS18-218ENST00000581021 TTC39AQ5SRH9 613 aa24.72■■□□□ 1.55
SS18-218ENST00000581021 TCP10L2B9ZVM9 353 aa24.71■■□□□ 1.55
SS18-218ENST00000581021 AOC2O75106 756 aa24.71■■□□□ 1.55
SS18-218ENST00000581021 KIF1BPQ96EK5 621 aa24.71■■□□□ 1.55
SS18-218ENST00000581021 ZNF512BQ96KM6 892 aaPredicted RBP24.71■■□□□ 1.55
SS18-218ENST00000581021 TEPSINQ96N21 525 aa24.71■■□□□ 1.55
SS18-218ENST00000581021 PPP2R3BQ9Y5P8 575 aa24.71■■□□□ 1.55
SS18-218ENST00000581021 GAKO14976 1311 aa24.7■■□□□ 1.54
SS18-218ENST00000581021 NBPF12Q5TAG4 269 aaPredicted RBP24.7■■□□□ 1.54
SS18-218ENST00000581021 ZGPATQ8N5A5 531 aaKnown RBP24.7■■□□□ 1.54
SS18-218ENST00000581021 ZIC5Q96T25 663 aa24.7■■□□□ 1.54
SS18-218ENST00000581021 FAM155AB1AL88 458 aaPredicted RBP24.69■■□□□ 1.54
SS18-218ENST00000581021 UBE2Q2LH0YL09 131 aa24.69■■□□□ 1.54
SS18-218ENST00000581021 FKBP1BP68106 108 aa24.69■■□□□ 1.54
SS18-218ENST00000581021 MECOMQ03112 1051 aa24.69■■□□□ 1.54
SS18-218ENST00000581021 CCDC158Q5M9N0 1113 aa24.69■■□□□ 1.54
SS18-218ENST00000581021 CDC42EP5Q6NZY7 148 aa24.69■■□□□ 1.54
SS18-218ENST00000581021 TMEM39BQ9GZU3 492 aa24.69■■□□□ 1.54
SS18-218ENST00000581021 RAB11FIP3O75154 756 aa24.68■■□□□ 1.54
SS18-218ENST00000581021 CYP2E1P05181 493 aaPredicted RBP24.68■■□□□ 1.54
SS18-218ENST00000581021 PRKG1Q13976 671 aa24.68■■□□□ 1.54
SS18-218ENST00000581021 RGMBQ6NW40 437 aa24.68■■□□□ 1.54
SS18-218ENST00000581021 DZIP1Q86YF9 867 aaKnown RBP24.68■■□□□ 1.54
SS18-218ENST00000581021 NDUFB9Q9Y6M9 179 aa24.68■■□□□ 1.54
SS18-218ENST00000581021 MYH2Q9UKX2 1941 aa24.68■■□□□ 1.54
SS18-218ENST00000581021 HSPA1AP0DMV8 641 aaKnown RBP24.67■■□□□ 1.54
SS18-218ENST00000581021 HSPA1BP0DMV9 641 aaKnown RBP24.67■■□□□ 1.54
SS18-218ENST00000581021 ECE1P42892 770 aa24.67■■□□□ 1.54
SS18-218ENST00000581021 ZAP70P43403 619 aa24.67■■□□□ 1.54
SS18-218ENST00000581021 NFIAQ12857 509 aa24.67■■□□□ 1.54
SS18-218ENST00000581021 PIH1D3Q9NQM4 214 aaKnown RBP24.67■■□□□ 1.54
SS18-218ENST00000581021 RFX7Q2KHR2 1363 aa24.67■■□□□ 1.54
SS18-218ENST00000581021 TNFAIP1Q13829 316 aa24.66■■□□□ 1.54
SS18-218ENST00000581021 SPTY2D1Q68D10 685 aaPredicted RBP24.66■■□□□ 1.54
SS18-218ENST00000581021 ERICH6Q7L0X2 663 aa24.66■■□□□ 1.54
SS18-218ENST00000581021 NSUN4Q96CB9 384 aaKnown RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms