RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 CRKP46108 304 aa17.81■□□□□ 0.44
MKS1-207ENST00000578789 HSP90AB4PQ58FF6 505 aa17.81■□□□□ 0.44
MKS1-207ENST00000578789 PRMT6Q96LA8 375 aaPredicted RBP17.81■□□□□ 0.44
MKS1-207ENST00000578789 ZNF408Q9H9D4 720 aa17.81■□□□□ 0.44
MKS1-207ENST00000578789 ABT1Q9ULW3 272 aaKnown RBP17.81■□□□□ 0.44
MKS1-207ENST00000578789 EXOC6BQ9Y2D4 811 aa17.81■□□□□ 0.44
MKS1-207ENST00000578789 AKAP11Q9UKA4 1901 aa17.8■□□□□ 0.44
MKS1-207ENST00000578789 AOX1Q06278 1338 aa17.8■□□□□ 0.44
MKS1-207ENST00000578789 MYO1BO43795 1136 aa17.8■□□□□ 0.44
MKS1-207ENST00000578789 MKRN1Q9UHC7 482 aaKnown RBP17.8■□□□□ 0.44
MKS1-207ENST00000578789 RBM5P52756 815 aaKnown RBP eCLIP17.79■□□□□ 0.44
MKS1-207ENST00000578789 SPDYE2Q495Y8 402 aa17.79■□□□□ 0.44
MKS1-207ENST00000578789 SAPCD2Q86UD0 394 aa17.79■□□□□ 0.44
MKS1-207ENST00000578789 ZGPATQ8N5A5 531 aaKnown RBP17.79■□□□□ 0.44
MKS1-207ENST00000578789 TEKT1Q969V4 418 aa17.79■□□□□ 0.44
MKS1-207ENST00000578789 HHIPL1Q96JK4 782 aa17.79■□□□□ 0.44
MKS1-207ENST00000578789 ZDHHC15Q96MV8 337 aa17.79■□□□□ 0.44
MKS1-207ENST00000578789 DBNDD2Q9BQY9 259 aa17.79■□□□□ 0.44
MKS1-207ENST00000578789 SCAF8Q9UPN6 1271 aaKnown RBP17.79■□□□□ 0.44
MKS1-207ENST00000578789 UQCRFS1P1P0C7P4 283 aa17.78■□□□□ 0.44
MKS1-207ENST00000578789 PRDX5P30044 214 aa17.78■□□□□ 0.44
MKS1-207ENST00000578789 DEFB115Q30KQ5 88 aa17.78■□□□□ 0.44
MKS1-207ENST00000578789 GORABQ5T7V8 394 aa17.78■□□□□ 0.44
MKS1-207ENST00000578789 HHIPL2Q6UWX4 724 aa17.78■□□□□ 0.44
MKS1-207ENST00000578789 RHPN1Q8TCX5 695 aa17.78■□□□□ 0.44
MKS1-207ENST00000578789 EAF2Q96CJ1 260 aaPredicted RBP17.78■□□□□ 0.44
MKS1-207ENST00000578789 GBA2Q9HCG7 927 aaPredicted RBP17.78■□□□□ 0.44
MKS1-207ENST00000578789 HMG20BQ9P0W2 317 aa17.78■□□□□ 0.44
MKS1-207ENST00000578789 DBNLQ9UJU6 430 aaKnown RBP17.78■□□□□ 0.44
MKS1-207ENST00000578789 PPP2R3BQ9Y5P8 575 aa17.78■□□□□ 0.44
MKS1-207ENST00000578789 MAST2Q6P0Q8 1798 aa17.78■□□□□ 0.44
MKS1-207ENST00000578789 MYH2Q9UKX2 1941 aa17.77■□□□□ 0.44
MKS1-207ENST00000578789 CLRN2A0PK11 232 aa17.77■□□□□ 0.44
MKS1-207ENST00000578789 LDHBP07195 334 aaKnown RBP17.77■□□□□ 0.44
MKS1-207ENST00000578789 KIF1BPQ96EK5 621 aa17.77■□□□□ 0.44
MKS1-207ENST00000578789 ZNF512BQ96KM6 892 aaPredicted RBP17.77■□□□□ 0.44
MKS1-207ENST00000578789 ZNF70Q9UC06 446 aaPredicted RBP17.77■□□□□ 0.44
MKS1-207ENST00000578789 RAB11FIP3O75154 756 aa17.76■□□□□ 0.43
MKS1-207ENST00000578789 MCAMP43121 646 aa17.76■□□□□ 0.43
MKS1-207ENST00000578789 VEGFBP49765 207 aa17.76■□□□□ 0.43
MKS1-207ENST00000578789 FKBP1BP68106 108 aa17.76■□□□□ 0.43
MKS1-207ENST00000578789 SPATA5Q8NB90 893 aa17.76■□□□□ 0.43
MKS1-207ENST00000578789 DEFB129Q9H1M3 183 aa17.76■□□□□ 0.43
MKS1-207ENST00000578789 TDRD3Q9H7E2 651 aaKnown RBP17.76■□□□□ 0.43
MKS1-207ENST00000578789 TLR7Q9NYK1 1049 aaKnown RBP17.76■□□□□ 0.43
MKS1-207ENST00000578789 SSC5DA1L4H1 1573 aa17.75■□□□□ 0.43
MKS1-207ENST00000578789 TNFAIP1Q13829 316 aa17.75■□□□□ 0.43
MKS1-207ENST00000578789 CCDC158Q5M9N0 1113 aa17.75■□□□□ 0.43
MKS1-207ENST00000578789 TTC39AQ5SRH9 613 aa17.75■□□□□ 0.43
MKS1-207ENST00000578789 APOBEC3HQ6NTF7 200 aaKnown RBP17.75■□□□□ 0.43
MKS1-207ENST00000578789 PI16Q6UXB8 463 aa17.75■□□□□ 0.43
MKS1-207ENST00000578789 C2orf69Q8N8R5 385 aa17.75■□□□□ 0.43
MKS1-207ENST00000578789 VEZTQ9HBM0 779 aa17.75■□□□□ 0.43
MKS1-207ENST00000578789 DAGLAQ9Y4D2 1042 aa17.75■□□□□ 0.43
MKS1-207ENST00000578789 PRAMEF18Q5VWM3 479 aa17.74■□□□□ 0.43
MKS1-207ENST00000578789 SPTY2D1Q68D10 685 aaPredicted RBP17.74■□□□□ 0.43
MKS1-207ENST00000578789 AACSQ86V21 672 aa17.74■□□□□ 0.43
MKS1-207ENST00000578789 CRBNQ96SW2 442 aa17.74■□□□□ 0.43
MKS1-207ENST00000578789 CCDC8Q9H0W5 538 aaPredicted RBP17.74■□□□□ 0.43
MKS1-207ENST00000578789 IL1RAPL2Q9NP60 686 aa17.74■□□□□ 0.43
MKS1-207ENST00000578789 GAKO14976 1311 aa17.73■□□□□ 0.43
MKS1-207ENST00000578789 WDR33Q9C0J8 1336 aaKnown RBP17.73■□□□□ 0.43
MKS1-207ENST00000578789 NF2P35240 595 aa17.73■□□□□ 0.43
MKS1-207ENST00000578789 ECE1P42892 770 aa17.73■□□□□ 0.43
MKS1-207ENST00000578789 HUNKP57058 714 aa17.73■□□□□ 0.43
MKS1-207ENST00000578789 DIXDC1Q155Q3 683 aa17.73■□□□□ 0.43
MKS1-207ENST00000578789 CLASRPQ8N2M8 674 aaKnown RBP17.73■□□□□ 0.43
MKS1-207ENST00000578789 CAPNS2Q96L46 248 aa17.73■□□□□ 0.43
MKS1-207ENST00000578789 ABCF2Q9UG63 623 aa17.73■□□□□ 0.43
MKS1-207ENST00000578789 DOCK2Q92608 1830 aa17.72■□□□□ 0.43
MKS1-207ENST00000578789 MYO5AQ9Y4I1 1855 aaKnown RBP17.72■□□□□ 0.43
MKS1-207ENST00000578789 RPAP1Q9BWH6 1393 aaPredicted RBP17.72■□□□□ 0.43
MKS1-207ENST00000578789 RASA3Q14644 834 aa17.72■□□□□ 0.43
MKS1-207ENST00000578789 FKBP1CQ5VVH2 108 aa17.72■□□□□ 0.43
MKS1-207ENST00000578789 CYP4F22Q6NT55 531 aa17.72■□□□□ 0.43
MKS1-207ENST00000578789 ERICH6Q7L0X2 663 aa17.72■□□□□ 0.43
MKS1-207ENST00000578789 DZIP1Q86YF9 867 aaKnown RBP17.72■□□□□ 0.43
MKS1-207ENST00000578789 SLF2Q8IX21 1173 aa17.71■□□□□ 0.43
MKS1-207ENST00000578789 FAM163AQ96GL9 167 aaPredicted RBP17.71■□□□□ 0.43
MKS1-207ENST00000578789 TMOD2Q9NZR1 351 aa17.71■□□□□ 0.43
MKS1-207ENST00000578789 PCDHB15Q9Y5E8 787 aa17.71■□□□□ 0.43
MKS1-207ENST00000578789 RFX7Q2KHR2 1363 aa17.7■□□□□ 0.42
MKS1-207ENST00000578789 APBB1O00213 710 aa17.7■□□□□ 0.42
MKS1-207ENST00000578789 IGSF3O75054 1194 aa17.7■□□□□ 0.42
MKS1-207ENST00000578789 TNNI2P48788 182 aa17.7■□□□□ 0.42
MKS1-207ENST00000578789 MECOMQ03112 1051 aa17.7■□□□□ 0.42
MKS1-207ENST00000578789 RGMBQ6NW40 437 aa17.7■□□□□ 0.42
MKS1-207ENST00000578789 TBC1D9Q6ZT07 1266 aa17.7■□□□□ 0.42
MKS1-207ENST00000578789 PAXIP1Q6ZW49 1069 aaPredicted RBP17.7■□□□□ 0.42
MKS1-207ENST00000578789 FAM83AQ86UY5 434 aa17.7■□□□□ 0.42
MKS1-207ENST00000578789 ZNF384Q8TF68 577 aa17.7■□□□□ 0.42
MKS1-207ENST00000578789 TEPSINQ96N21 525 aa17.7■□□□□ 0.42
MKS1-207ENST00000578789 DCTPP1Q9H773 170 aa17.7■□□□□ 0.42
MKS1-207ENST00000578789 MROH7-TTC4A0A0A0MT08 1334 aa17.7■□□□□ 0.42
MKS1-207ENST00000578789 OTOFQ9HC10 1997 aa17.7■□□□□ 0.42
MKS1-207ENST00000578789 TCP10L2B9ZVM9 353 aa17.69■□□□□ 0.42
MKS1-207ENST00000578789 CYP2E1P05181 493 aaPredicted RBP17.69■□□□□ 0.42
MKS1-207ENST00000578789 AAMPQ13685 434 aa17.69■□□□□ 0.42
MKS1-207ENST00000578789 MAP3K11Q16584 847 aa17.69■□□□□ 0.42
MKS1-207ENST00000578789 SUPT20HL1Q3ZLR7 823 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 178.9 ms