RNA–Protein interactions for RNA: ENST00000576668.1

ABR-234, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-234ENST00000576668 RAI14Q9P0K7 980 aa20.36■□□□□ 0.85
ABR-234ENST00000576668 RBM19Q9Y4C8 960 aaKnown RBP20.36■□□□□ 0.85
ABR-234ENST00000576668 GTF2IP78347 998 aa20.35■□□□□ 0.85
ABR-234ENST00000576668 PTH1RQ03431 593 aa20.35■□□□□ 0.85
ABR-234ENST00000576668 NSUN4Q96CB9 384 aaKnown RBP20.35■□□□□ 0.85
ABR-234ENST00000576668 PUS7LQ9H0K6 701 aaKnown RBP20.35■□□□□ 0.85
ABR-234ENST00000576668 LTBP3Q9NS15 1303 aa20.34■□□□□ 0.85
ABR-234ENST00000576668 EPB41L2O43491 1005 aaKnown RBP20.34■□□□□ 0.85
ABR-234ENST00000576668 RBM25P49756 843 aaKnown RBP20.34■□□□□ 0.85
ABR-234ENST00000576668 MECOMQ03112 1051 aa20.34■□□□□ 0.85
ABR-234ENST00000576668 ADGRA1Q86SQ6 560 aa20.34■□□□□ 0.85
ABR-234ENST00000576668 VPS33BQ9H267 617 aa20.34■□□□□ 0.85
ABR-234ENST00000576668 YDJCA8MPS7 323 aa20.33■□□□□ 0.85
ABR-234ENST00000576668 G3V3G9 751 aa20.33■□□□□ 0.85
ABR-234ENST00000576668 IGSF3O75054 1194 aa20.33■□□□□ 0.85
ABR-234ENST00000576668 IARSP41252 1262 aaKnown RBP20.33■□□□□ 0.85
ABR-234ENST00000576668 MFSD14BQ5SR56 506 aa20.33■□□□□ 0.85
ABR-234ENST00000576668 DCAF8Q5TAQ9 597 aa20.33■□□□□ 0.85
ABR-234ENST00000576668 C9orf131Q5VYM1 1079 aa20.33■□□□□ 0.85
ABR-234ENST00000576668 SPTY2D1Q68D10 685 aaPredicted RBP20.33■□□□□ 0.85
ABR-234ENST00000576668 CERS5Q8N5B7 392 aa20.33■□□□□ 0.85
ABR-234ENST00000576668 TBC1D22AQ8WUA7 517 aa20.33■□□□□ 0.85
ABR-234ENST00000576668 ADAMTSL1Q8N6G6 1762 aa20.32■□□□□ 0.84
ABR-234ENST00000576668 GPAA1O43292 621 aa20.32■□□□□ 0.84
ABR-234ENST00000576668 LDHBP07195 334 aaKnown RBP20.32■□□□□ 0.84
ABR-234ENST00000576668 CYP7A1P22680 504 aa20.32■□□□□ 0.84
ABR-234ENST00000576668 RASSF7Q02833 373 aa20.32■□□□□ 0.84
ABR-234ENST00000576668 NAA16Q6N069 864 aaPredicted RBP20.32■□□□□ 0.84
ABR-234ENST00000576668 KIAA1211Q6ZU35 1233 aa20.32■□□□□ 0.84
ABR-234ENST00000576668 FBXW7Q969H0 707 aa20.32■□□□□ 0.84
ABR-234ENST00000576668 KCNQ5Q9NR82 932 aa20.32■□□□□ 0.84
ABR-234ENST00000576668 FOXP2O15409 715 aa20.31■□□□□ 0.84
ABR-234ENST00000576668 VPS53Q5VIR6 699 aa20.31■□□□□ 0.84
ABR-234ENST00000576668 TTLL5Q6EMB2 1281 aa20.31■□□□□ 0.84
ABR-234ENST00000576668 DZIP1Q86YF9 867 aaKnown RBP20.31■□□□□ 0.84
ABR-234ENST00000576668 LARGE2Q8N3Y3 721 aa20.31■□□□□ 0.84
ABR-234ENST00000576668 MXD3Q9BW11 206 aa20.31■□□□□ 0.84
ABR-234ENST00000576668 GPBP1L1Q9HC44 474 aaPredicted RBP20.31■□□□□ 0.84
ABR-234ENST00000576668 MYH2Q9UKX2 1941 aa20.3■□□□□ 0.84
ABR-234ENST00000576668 MBD4O95243 580 aa20.3■□□□□ 0.84
ABR-234ENST00000576668 DACT2Q5SW24 774 aa20.3■□□□□ 0.84
ABR-234ENST00000576668 TMED8Q6PL24 325 aaPredicted RBP20.3■□□□□ 0.84
ABR-234ENST00000576668 ZNF526Q8TF50 670 aaPredicted RBP20.3■□□□□ 0.84
ABR-234ENST00000576668 RNF181Q9P0P0 153 aa20.3■□□□□ 0.84
ABR-234ENST00000576668 PRELPP51888 382 aa20.29■□□□□ 0.84
ABR-234ENST00000576668 FKBP1AP62942 108 aaKnown RBP20.29■□□□□ 0.84
ABR-234ENST00000576668 STRIP1Q5VSL9 837 aa20.29■□□□□ 0.84
ABR-234ENST00000576668 LCORLQ8N3X6 602 aa20.29■□□□□ 0.84
ABR-234ENST00000576668 MIGA1Q8NAN2 632 aa20.29■□□□□ 0.84
ABR-234ENST00000576668 MAP4K1Q92918 833 aa20.29■□□□□ 0.84
ABR-234ENST00000576668 RIOK1Q9BRS2 568 aaKnown RBP20.29■□□□□ 0.84
ABR-234ENST00000576668 PALD1Q9ULE6 856 aa20.29■□□□□ 0.84
ABR-234ENST00000576668 SUGT1Q9Y2Z0 365 aa20.29■□□□□ 0.84
ABR-234ENST00000576668 RBM8AQ9Y5S9 174 aaKnown RBP20.29■□□□□ 0.84
ABR-234ENST00000576668 USP17L3A6NCW0 530 aa20.28■□□□□ 0.84
ABR-234ENST00000576668 USP17L4A6NCW7 530 aa20.28■□□□□ 0.84
ABR-234ENST00000576668 HSPA4P34932 840 aa20.28■□□□□ 0.84
ABR-234ENST00000576668 DIXDC1Q155Q3 683 aa20.28■□□□□ 0.84
ABR-234ENST00000576668 USP17L1Q7RTZ2 530 aa20.28■□□□□ 0.84
ABR-234ENST00000576668 NIM1KQ8IY84 436 aa20.28■□□□□ 0.84
ABR-234ENST00000576668 AIDAQ96BJ3 306 aa20.28■□□□□ 0.84
ABR-234ENST00000576668 STRBPQ96SI9 672 aaKnown RBP20.28■□□□□ 0.84
ABR-234ENST00000576668 KIF2CQ99661 725 aa20.28■□□□□ 0.84
ABR-234ENST00000576668 DSCC1Q9BVC3 393 aa20.28■□□□□ 0.84
ABR-234ENST00000576668 ARMT1Q9H993 441 aa20.28■□□□□ 0.84
ABR-234ENST00000576668 LAMA4Q16363 1823 aa20.27■□□□□ 0.84
ABR-234ENST00000576668 HSPD1P10809 573 aaKnown RBP20.27■□□□□ 0.84
ABR-234ENST00000576668 LMNB1P20700 586 aa20.27■□□□□ 0.84
ABR-234ENST00000576668 MROH7-TTC4A0A0A0MT08 1334 aa20.27■□□□□ 0.83
ABR-234ENST00000576668 DICER1Q9UPY3 1922 aaKnown RBP20.26■□□□□ 0.83
ABR-234ENST00000576668 DYNLL1P63167 89 aaKnown RBP20.26■□□□□ 0.83
ABR-234ENST00000576668 NECTIN1Q15223 517 aa20.26■□□□□ 0.83
ABR-234ENST00000576668 GAKO14976 1311 aa20.26■□□□□ 0.83
ABR-234ENST00000576668 MAGEB6P1A0A0J9YX57 407 aa20.25■□□□□ 0.83
ABR-234ENST00000576668 MCCP23508 829 aa20.25■□□□□ 0.83
ABR-234ENST00000576668 GSTO1P78417 241 aa20.25■□□□□ 0.83
ABR-234ENST00000576668 IL17RAQ96F46 866 aa20.25■□□□□ 0.83
ABR-234ENST00000576668 ZNRF3Q9ULT6 936 aa20.25■□□□□ 0.83
ABR-234ENST00000576668 U3KPZ7 1027 aaPredicted RBP20.25■□□□□ 0.83
ABR-234ENST00000576668 CDK5RAP2Q96SN8 1893 aa20.24■□□□□ 0.83
ABR-234ENST00000576668 F8W031 263 aaPredicted RBP20.24■□□□□ 0.83
ABR-234ENST00000576668 KCNB2Q92953 911 aa20.24■□□□□ 0.83
ABR-234ENST00000576668 EPB41L4AQ9HCS5 686 aaPredicted RBP20.24■□□□□ 0.83
ABR-234ENST00000576668 AATFQ9NY61 560 aaKnown RBP eCLIP20.24■□□□□ 0.83
ABR-234ENST00000576668 TTF2Q9UNY4 1162 aaKnown RBP20.24■□□□□ 0.83
ABR-234ENST00000576668 TIAM2Q8IVF5 1701 aa20.24■□□□□ 0.83
ABR-234ENST00000576668 PSMD14O00487 310 aa20.23■□□□□ 0.83
ABR-234ENST00000576668 PRKAB2O43741 272 aa20.23■□□□□ 0.83
ABR-234ENST00000576668 RAD17O75943 681 aa20.23■□□□□ 0.83
ABR-234ENST00000576668 DDX60LQ5H9U9 1706 aaKnown RBP20.23■□□□□ 0.83
ABR-234ENST00000576668 CREB3L3Q68CJ9 461 aa20.23■□□□□ 0.83
ABR-234ENST00000576668 RASEFQ8IZ41 740 aa20.23■□□□□ 0.83
ABR-234ENST00000576668 NAV1Q8NEY1 1877 aa20.22■□□□□ 0.83
ABR-234ENST00000576668 SLC27A2O14975 620 aa20.22■□□□□ 0.83
ABR-234ENST00000576668 LDHCP07864 332 aa20.22■□□□□ 0.83
ABR-234ENST00000576668 ANAPC15P60006 121 aa20.22■□□□□ 0.83
ABR-234ENST00000576668 C1QTNF8P60827 252 aa20.22■□□□□ 0.83
ABR-234ENST00000576668 RSBN1LQ6PCB5 846 aaPredicted RBP20.22■□□□□ 0.83
ABR-234ENST00000576668 JDP2Q8WYK2 163 aa20.22■□□□□ 0.83
ABR-234ENST00000576668 FAM163AQ96GL9 167 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms