RNA–Protein interactions for RNA: ENST00000566624.5

RPL4-213, Transcript of ribosomal protein L4, human

TSL 2

Gene RPL4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL4-213	ENST00000566624	CWF19L2	Q2TBE0	894 aa	Known RBP	13.8	□□□□□ -0.2
RPL4-213	ENST00000566624	C15orf52	Q6ZUT6	534 aa	Known RBP	13.8	□□□□□ -0.2
RPL4-213	ENST00000566624		Q7L0L9	218 aa		13.8	□□□□□ -0.2
RPL4-213	ENST00000566624	NKX2-3	Q8TAU0	364 aa		13.8	□□□□□ -0.2
RPL4-213	ENST00000566624	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.8	□□□□□ -0.2
RPL4-213	ENST00000566624	TMEM39B	Q9GZU3	492 aa		13.8	□□□□□ -0.2
RPL4-213	ENST00000566624	TDRD3	Q9H7E2	651 aa	Known RBP	13.8	□□□□□ -0.2
RPL4-213	ENST00000566624	RIPOR2	Q9Y4F9	1068 aa		13.8	□□□□□ -0.2
RPL4-213	ENST00000566624	SNCAIP	Q9Y6H5	919 aa		13.8	□□□□□ -0.2
RPL4-213	ENST00000566624	ARAP2	Q8WZ64	1704 aa		13.8	□□□□□ -0.2
RPL4-213	ENST00000566624		A0A1B0GUL6	1792 aa		13.79	□□□□□ -0.2
RPL4-213	ENST00000566624	FARP2	O94887	1054 aa	Predicted RBP	13.79	□□□□□ -0.2
RPL4-213	ENST00000566624	ZNF853	P0CG23	659 aa		13.79	□□□□□ -0.2
RPL4-213	ENST00000566624	PSMC4	P43686	418 aa		13.79	□□□□□ -0.2
RPL4-213	ENST00000566624	KCNJ4	P48050	445 aa		13.79	□□□□□ -0.2
RPL4-213	ENST00000566624	RBM5	P52756	815 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
RPL4-213	ENST00000566624	FKBP1A	P62942	108 aa	Known RBP	13.79	□□□□□ -0.2
RPL4-213	ENST00000566624	HELB	Q8NG08	1087 aa	Predicted RBP	13.79	□□□□□ -0.2
RPL4-213	ENST00000566624	RNF208	Q9H0X6	261 aa		13.79	□□□□□ -0.2
RPL4-213	ENST00000566624	ZCCHC17	Q9NP64	241 aa	Known RBP	13.79	□□□□□ -0.2
RPL4-213	ENST00000566624	CPA4	Q9UI42	421 aa		13.79	□□□□□ -0.2
RPL4-213	ENST00000566624	ADGRA2	Q96PE1	1338 aa		13.79	□□□□□ -0.2
RPL4-213	ENST00000566624	VCAN	P13611	3396 aa		13.79	□□□□□ -0.2
RPL4-213	ENST00000566624	TCP10L2	B9ZVM9	353 aa		13.78	□□□□□ -0.2
RPL4-213	ENST00000566624		H7C1W4	665 aa		13.78	□□□□□ -0.2
RPL4-213	ENST00000566624	IRF6	O14896	467 aa		13.78	□□□□□ -0.2
RPL4-213	ENST00000566624	CETP	P11597	493 aa		13.78	□□□□□ -0.2
RPL4-213	ENST00000566624	UBE3B	Q7Z3V4	1068 aa		13.78	□□□□□ -0.2
RPL4-213	ENST00000566624	DEFB123	Q8N688	67 aa		13.78	□□□□□ -0.2
RPL4-213	ENST00000566624	U2AF1L4	Q8WU68	220 aa	Known RBP	13.78	□□□□□ -0.2
RPL4-213	ENST00000566624	UNC93B1	Q9H1C4	597 aa		13.78	□□□□□ -0.2
RPL4-213	ENST00000566624	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.77	□□□□□ -0.2
RPL4-213	ENST00000566624	PI4KAP2	A4QPH2	592 aa		13.77	□□□□□ -0.21
RPL4-213	ENST00000566624	TNFAIP1	Q13829	316 aa		13.77	□□□□□ -0.21
RPL4-213	ENST00000566624	MYPN	Q86TC9	1320 aa		13.77	□□□□□ -0.21
RPL4-213	ENST00000566624	PI4KAP1	Q8N8J0	262 aa		13.77	□□□□□ -0.21
RPL4-213	ENST00000566624	C8orf58	Q8NAV2	365 aa		13.77	□□□□□ -0.21
RPL4-213	ENST00000566624	RAET1E	Q8TD07	263 aa		13.77	□□□□□ -0.21
RPL4-213	ENST00000566624	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.77	□□□□□ -0.21
RPL4-213	ENST00000566624	MPHOSPH8	Q99549	860 aa		13.77	□□□□□ -0.21
RPL4-213	ENST00000566624	CSAD	Q9Y600	493 aa		13.77	□□□□□ -0.21
RPL4-213	ENST00000566624	ALPK3	Q96L96	1907 aa		13.76	□□□□□ -0.21
RPL4-213	ENST00000566624	NEURL1B	A8MQ27	555 aa		13.76	□□□□□ -0.21
RPL4-213	ENST00000566624	EVI5	O60447	810 aa		13.76	□□□□□ -0.21
RPL4-213	ENST00000566624	CSF1R	P07333	972 aa		13.76	□□□□□ -0.21
RPL4-213	ENST00000566624	CASP7	P55210	303 aa		13.76	□□□□□ -0.21
RPL4-213	ENST00000566624	PRKCZ	Q05513	592 aa		13.76	□□□□□ -0.21
RPL4-213	ENST00000566624	SNAPC2	Q13487	334 aa		13.76	□□□□□ -0.21
RPL4-213	ENST00000566624	KSR2	Q6VAB6	950 aa		13.76	□□□□□ -0.21
RPL4-213	ENST00000566624	ERO1B	Q86YB8	467 aa		13.76	□□□□□ -0.21
RPL4-213	ENST00000566624	DZIP1L	Q8IYY4	767 aa	Known RBP	13.76	□□□□□ -0.21
RPL4-213	ENST00000566624	GDF15	Q99988	308 aa		13.76	□□□□□ -0.21
RPL4-213	ENST00000566624	PLA2G12B	Q9BX93	195 aa		13.76	□□□□□ -0.21
RPL4-213	ENST00000566624	MTMR10	Q9NXD2	777 aa		13.76	□□□□□ -0.21
RPL4-213	ENST00000566624	STXBP5L	Q9Y2K9	1186 aa		13.76	□□□□□ -0.21
RPL4-213	ENST00000566624	WDHD1	O75717	1129 aa	Predicted RBP	13.75	□□□□□ -0.21
RPL4-213	ENST00000566624	FMNL1	O95466	1100 aa	Predicted RBP	13.75	□□□□□ -0.21
RPL4-213	ENST00000566624	SGPL1	O95470	568 aa		13.75	□□□□□ -0.21
RPL4-213	ENST00000566624	DDX58	O95786	925 aa	Known RBP	13.75	□□□□□ -0.21
RPL4-213	ENST00000566624	GRIK5	Q16478	980 aa		13.75	□□□□□ -0.21
RPL4-213	ENST00000566624	GPR153	Q6NV75	609 aa		13.75	□□□□□ -0.21
RPL4-213	ENST00000566624	RUNDC1	Q96C34	613 aa		13.75	□□□□□ -0.21
RPL4-213	ENST00000566624	SERPINA10	Q9UK55	444 aa		13.75	□□□□□ -0.21
RPL4-213	ENST00000566624	GABRQ	Q9UN88	632 aa		13.75	□□□□□ -0.21
RPL4-213	ENST00000566624	FAM205A	Q6ZU69	1335 aa		13.74	□□□□□ -0.21
RPL4-213	ENST00000566624	CACNB3	P54284	484 aa		13.74	□□□□□ -0.21
RPL4-213	ENST00000566624	PPIL2	Q13356	520 aa		13.74	□□□□□ -0.21
RPL4-213	ENST00000566624	MOGS	Q13724	837 aa		13.74	□□□□□ -0.21
RPL4-213	ENST00000566624	ZNF804A	Q7Z570	1209 aa		13.74	□□□□□ -0.21
RPL4-213	ENST00000566624	WRNIP1	Q96S55	665 aa		13.74	□□□□□ -0.21
RPL4-213	ENST00000566624	BIN2	Q9UBW5	565 aa	Predicted RBP	13.74	□□□□□ -0.21
RPL4-213	ENST00000566624	TTF2	Q9UNY4	1162 aa	Known RBP	13.74	□□□□□ -0.21
RPL4-213	ENST00000566624		U3KPZ7	1027 aa	Predicted RBP	13.74	□□□□□ -0.21
RPL4-213	ENST00000566624	SLC4A2	P04920	1241 aa		13.73	□□□□□ -0.21
RPL4-213	ENST00000566624	BMP8B	P34820	402 aa		13.73	□□□□□ -0.21
RPL4-213	ENST00000566624	UBXN2A	P68543	259 aa		13.73	□□□□□ -0.21
RPL4-213	ENST00000566624	MFSD14B	Q5SR56	506 aa		13.73	□□□□□ -0.21
RPL4-213	ENST00000566624	TSPYL6	Q8N831	410 aa		13.73	□□□□□ -0.21
RPL4-213	ENST00000566624	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.73	□□□□□ -0.21
RPL4-213	ENST00000566624	EYS	Q5T1H1	3165 aa		13.73	□□□□□ -0.21
RPL4-213	ENST00000566624	PDHX	O00330	501 aa		13.72	□□□□□ -0.21
RPL4-213	ENST00000566624	HOXD10	P28358	340 aa		13.72	□□□□□ -0.21
RPL4-213	ENST00000566624	CRK	P46108	304 aa		13.72	□□□□□ -0.21
RPL4-213	ENST00000566624	BCAM	P50895	628 aa		13.72	□□□□□ -0.21
RPL4-213	ENST00000566624	GCKR	Q14397	625 aa		13.72	□□□□□ -0.21
RPL4-213	ENST00000566624	G2E3	Q7L622	706 aa		13.72	□□□□□ -0.21
RPL4-213	ENST00000566624	ANKRD23	Q86SG2	305 aa		13.72	□□□□□ -0.21
RPL4-213	ENST00000566624	SLAIN1	Q8ND83	568 aa		13.72	□□□□□ -0.21
RPL4-213	ENST00000566624	DIS3L	Q8TF46	1054 aa	Known RBP	13.72	□□□□□ -0.21
RPL4-213	ENST00000566624	BCR	P11274	1271 aa		13.71	□□□□□ -0.21
RPL4-213	ENST00000566624	ELN	P15502	786 aa		13.71	□□□□□ -0.21
RPL4-213	ENST00000566624	TNNI2	P48788	182 aa		13.71	□□□□□ -0.21
RPL4-213	ENST00000566624	NEXN	Q0ZGT2	675 aa		13.71	□□□□□ -0.21
RPL4-213	ENST00000566624	LRIT3	Q3SXY7	679 aa		13.71	□□□□□ -0.21
RPL4-213	ENST00000566624	CCDC30	Q5VVM6	783 aa		13.71	□□□□□ -0.21
RPL4-213	ENST00000566624	TDRD7	Q8NHU6	1098 aa	Known RBP	13.71	□□□□□ -0.21
RPL4-213	ENST00000566624	PAWR	Q96IZ0	340 aa	Known RBP	13.71	□□□□□ -0.21
RPL4-213	ENST00000566624	DEFB118	Q96PH6	123 aa		13.71	□□□□□ -0.21
RPL4-213	ENST00000566624	IFT57	Q9NWB7	429 aa		13.71	□□□□□ -0.21
RPL4-213	ENST00000566624	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms