RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 CDC37L1Q7L3B6 337 aa31.95■■■□□ 2.71
NME3-209ENST00000566600 TEKT1Q969V4 418 aa31.95■■■□□ 2.71
NME3-209ENST00000566600 ABCF2Q9UG63 623 aa31.95■■■□□ 2.71
NME3-209ENST00000566600 PITPNM2Q9BZ72 1349 aa31.95■■■□□ 2.7
NME3-209ENST00000566600 MYO1BO43795 1136 aa31.94■■■□□ 2.7
NME3-209ENST00000566600 ITGBL1O95965 494 aaPredicted RBP31.94■■■□□ 2.7
NME3-209ENST00000566600 CRKP46108 304 aa31.94■■■□□ 2.7
NME3-209ENST00000566600 GGA3Q9NZ52 723 aa31.94■■■□□ 2.7
NME3-209ENST00000566600 SPDYE2BA6NHP3 402 aa31.93■■■□□ 2.7
NME3-209ENST00000566600 SPDYE6P0CI01 402 aa31.93■■■□□ 2.7
NME3-209ENST00000566600 PRDX5P30044 214 aa31.93■■■□□ 2.7
NME3-209ENST00000566600 ANGEL2Q5VTE6 544 aaKnown RBP31.93■■■□□ 2.7
NME3-209ENST00000566600 PI16Q6UXB8 463 aa31.93■■■□□ 2.7
NME3-209ENST00000566600 HHIPL2Q6UWX4 724 aa31.92■■■□□ 2.7
NME3-209ENST00000566600 ERICH6Q7L0X2 663 aa31.92■■■□□ 2.7
NME3-209ENST00000566600 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.92■■■□□ 2.7
NME3-209ENST00000566600 SNRKQ9NRH2 765 aa31.92■■■□□ 2.7
NME3-209ENST00000566600 KRT26Q7Z3Y9 468 aa31.91■■■□□ 2.7
NME3-209ENST00000566600 SULF1Q8IWU6 871 aa31.91■■■□□ 2.7
NME3-209ENST00000566600 SLF2Q8IX21 1173 aa31.91■■■□□ 2.7
NME3-209ENST00000566600 PASKQ96RG2 1323 aa31.91■■■□□ 2.7
NME3-209ENST00000566600 AKAP11Q9UKA4 1901 aa31.9■■■□□ 2.7
NME3-209ENST00000566600 IGSF3O75054 1194 aa31.9■■■□□ 2.7
NME3-209ENST00000566600 DZIP1Q86YF9 867 aaKnown RBP31.9■■■□□ 2.7
NME3-209ENST00000566600 PRMT6Q96LA8 375 aaPredicted RBP31.9■■■□□ 2.7
NME3-209ENST00000566600 ASTN2O75129 1339 aaPredicted RBP31.9■■■□□ 2.7
NME3-209ENST00000566600 HSPA6P17066 643 aa31.89■■■□□ 2.7
NME3-209ENST00000566600 GPATCH3Q96I76 525 aa31.89■■■□□ 2.7
NME3-209ENST00000566600 ZDHHC15Q96MV8 337 aa31.89■■■□□ 2.7
NME3-209ENST00000566600 GLIS2Q9BZE0 524 aaPredicted RBP31.89■■■□□ 2.7
NME3-209ENST00000566600 LRP2BPQ9P2M1 347 aa31.89■■■□□ 2.7
NME3-209ENST00000566600 ZAP70P43403 619 aa31.88■■■□□ 2.69
NME3-209ENST00000566600 ANKRD45Q5TZF3 282 aa31.88■■■□□ 2.69
NME3-209ENST00000566600 USP48Q86UV5 1035 aa31.88■■■□□ 2.69
NME3-209ENST00000566600 APOBEC3FQ8IUX4 373 aaKnown RBP31.88■■■□□ 2.69
NME3-209ENST00000566600 SMC5Q8IY18 1101 aa31.88■■■□□ 2.69
NME3-209ENST00000566600 CYP2E1P05181 493 aaPredicted RBP31.87■■■□□ 2.69
NME3-209ENST00000566600 ATP5JP18859 108 aa31.87■■■□□ 2.69
NME3-209ENST00000566600 TBC1D9Q6ZT07 1266 aa31.87■■■□□ 2.69
NME3-209ENST00000566600 PCDHAC2Q9Y5I4 1007 aa31.87■■■□□ 2.69
NME3-209ENST00000566600 ECM29Q5VYK3 1845 aa31.86■■■□□ 2.69
NME3-209ENST00000566600 IGHDP01880 384 aa31.86■■■□□ 2.69
NME3-209ENST00000566600 APLP1P51693 650 aa31.86■■■□□ 2.69
NME3-209ENST00000566600 GSTO1P78417 241 aa31.86■■■□□ 2.69
NME3-209ENST00000566600 RAI14Q9P0K7 980 aa31.86■■■□□ 2.69
NME3-209ENST00000566600 POLR2AP24928 1970 aaKnown RBP31.85■■■□□ 2.69
NME3-209ENST00000566600 DIXDC1Q155Q3 683 aa31.85■■■□□ 2.69
NME3-209ENST00000566600 ECHDC1Q9NTX5 307 aa31.85■■■□□ 2.69
NME3-209ENST00000566600 MECOMQ03112 1051 aa31.84■■■□□ 2.69
NME3-209ENST00000566600 TTF1Q15361 905 aaPredicted RBP31.84■■■□□ 2.69
NME3-209ENST00000566600 SPDYE2Q495Y8 402 aa31.84■■■□□ 2.69
NME3-209ENST00000566600 TRAF5O00463 557 aa31.83■■■□□ 2.69
NME3-209ENST00000566600 LDHCP07864 332 aa31.83■■■□□ 2.69
NME3-209ENST00000566600 FAM163AQ96GL9 167 aaPredicted RBP31.83■■■□□ 2.69
NME3-209ENST00000566600 DAGLAQ9Y4D2 1042 aa31.83■■■□□ 2.69
NME3-209ENST00000566600 ADM5C9JUS6 153 aa31.82■■■□□ 2.68
NME3-209ENST00000566600 NEFLP07196 543 aa31.82■■■□□ 2.68
NME3-209ENST00000566600 APOBEC3HQ6NTF7 200 aaKnown RBP31.82■■■□□ 2.68
NME3-209ENST00000566600 NSUN4Q96CB9 384 aaKnown RBP31.82■■■□□ 2.68
NME3-209ENST00000566600 TDRD3Q9H7E2 651 aaKnown RBP31.82■■■□□ 2.68
NME3-209ENST00000566600 ZNF70Q9UC06 446 aaPredicted RBP31.82■■■□□ 2.68
NME3-209ENST00000566600 CLRN2A0PK11 232 aa31.81■■■□□ 2.68
NME3-209ENST00000566600 TNFAIP1Q13829 316 aa31.81■■■□□ 2.68
NME3-209ENST00000566600 VEZTQ9HBM0 779 aa31.81■■■□□ 2.68
NME3-209ENST00000566600 TMOD2Q9NZR1 351 aa31.81■■■□□ 2.68
NME3-209ENST00000566600 GAKO14976 1311 aa31.8■■■□□ 2.68
NME3-209ENST00000566600 TTC41PQ6P2S7 1318 aa31.8■■■□□ 2.68
NME3-209ENST00000566600 TMED8Q6PL24 325 aaPredicted RBP31.8■■■□□ 2.68
NME3-209ENST00000566600 DNAJC2Q99543 621 aaKnown RBP31.8■■■□□ 2.68
NME3-209ENST00000566600 PIH1D3Q9NQM4 214 aaKnown RBP31.8■■■□□ 2.68
NME3-209ENST00000566600 MYH2Q9UKX2 1941 aa31.8■■■□□ 2.68
NME3-209ENST00000566600 MROH7-TTC4A0A0A0MT08 1334 aa31.79■■■□□ 2.68
NME3-209ENST00000566600 HAUS7Q99871 368 aa31.79■■■□□ 2.68
NME3-209ENST00000566600 BOLA2Q9H3K6 86 aa31.79■■■□□ 2.68
NME3-209ENST00000566600 PPP2R3BQ9Y5P8 575 aa31.79■■■□□ 2.68
NME3-209ENST00000566600 NDUFB9Q9Y6M9 179 aa31.79■■■□□ 2.68
NME3-209ENST00000566600 AOX1Q06278 1338 aa31.78■■■□□ 2.68
NME3-209ENST00000566600 TRPM7Q96QT4 1865 aa31.78■■■□□ 2.68
NME3-209ENST00000566600 TMEM88BA6NKF7 163 aa31.78■■■□□ 2.68
NME3-209ENST00000566600 MAP3K12Q12852 859 aa31.78■■■□□ 2.68
NME3-209ENST00000566600 B4GALNT3Q6L9W6 998 aa31.78■■■□□ 2.68
NME3-209ENST00000566600 NAA16Q6N069 864 aaPredicted RBP31.78■■■□□ 2.68
NME3-209ENST00000566600 MAST2Q6P0Q8 1798 aa31.77■■■□□ 2.68
NME3-209ENST00000566600 ERC2O15083 957 aa31.77■■■□□ 2.68
NME3-209ENST00000566600 IDH1O75874 414 aaKnown RBP31.77■■■□□ 2.68
NME3-209ENST00000566600 TNNI2P48788 182 aa31.77■■■□□ 2.68
NME3-209ENST00000566600 CDCA5Q96FF9 252 aa31.77■■■□□ 2.68
NME3-209ENST00000566600 DEFB129Q9H1M3 183 aa31.77■■■□□ 2.68
NME3-209ENST00000566600 CREBZFQ9NS37 354 aa31.77■■■□□ 2.68
NME3-209ENST00000566600 PAG1Q9NWQ8 432 aa31.77■■■□□ 2.68
NME3-209ENST00000566600 GOLIM4O00461 696 aa31.76■■■□□ 2.67
NME3-209ENST00000566600 CELF2O95319 508 aaKnown RBP31.76■■■□□ 2.67
NME3-209ENST00000566600 MX1P20591 662 aa31.76■■■□□ 2.67
NME3-209ENST00000566600 NUCB1Q02818 461 aa31.76■■■□□ 2.67
NME3-209ENST00000566600 FMR1Q06787 632 aaKnown RBP eCLIP31.76■■■□□ 2.67
NME3-209ENST00000566600 FKBP1CQ5VVH2 108 aa31.76■■■□□ 2.67
NME3-209ENST00000566600 CHD1LQ86WJ1 897 aa31.76■■■□□ 2.67
NME3-209ENST00000566600 ZNF384Q8TF68 577 aa31.76■■■□□ 2.67
NME3-209ENST00000566600 ANTXR1Q9H6X2 564 aa31.76■■■□□ 2.67
NME3-209ENST00000566600 NOL10Q9BSC4 688 aaKnown RBP31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms