RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 TBC1D9Q6ZT07 1266 aa14.1□□□□□ -0.15
HERC1-214ENST00000561400 MXD3Q9BW11 206 aa14.1□□□□□ -0.15
HERC1-214ENST00000561400 DOCK2Q92608 1830 aa14.1□□□□□ -0.15
HERC1-214ENST00000561400 PDS5AQ29RF7 1337 aaKnown RBP14.1□□□□□ -0.15
HERC1-214ENST00000561400 USP17L3A6NCW0 530 aa14.1□□□□□ -0.15
HERC1-214ENST00000561400 USP17L4A6NCW7 530 aa14.1□□□□□ -0.15
HERC1-214ENST00000561400 GOLIM4O00461 696 aa14.1□□□□□ -0.15
HERC1-214ENST00000561400 TMEM132AQ24JP5 1023 aa14.1□□□□□ -0.15
HERC1-214ENST00000561400 STRIP1Q5VSL9 837 aa14.1□□□□□ -0.15
HERC1-214ENST00000561400 USP17L1Q7RTZ2 530 aa14.1□□□□□ -0.15
HERC1-214ENST00000561400 FBXW7Q969H0 707 aa14.1□□□□□ -0.15
HERC1-214ENST00000561400 IGSF3O75054 1194 aa14.09□□□□□ -0.15
HERC1-214ENST00000561400 ANP32AP39687 249 aaKnown RBP14.09□□□□□ -0.15
HERC1-214ENST00000561400 GRIK5Q16478 980 aa14.09□□□□□ -0.15
HERC1-214ENST00000561400 DACT2Q5SW24 774 aa14.09□□□□□ -0.15
HERC1-214ENST00000561400 CERS5Q8N5B7 392 aa14.09□□□□□ -0.15
HERC1-214ENST00000561400 PAG1Q9NWQ8 432 aa14.09□□□□□ -0.15
HERC1-214ENST00000561400 MYH7P12883 1935 aa14.09□□□□□ -0.15
HERC1-214ENST00000561400 DCAF8L1A6NGE4 600 aa14.09□□□□□ -0.15
HERC1-214ENST00000561400 PSMD14O00487 310 aa14.09□□□□□ -0.15
HERC1-214ENST00000561400 WDR66Q8TBY9 1149 aa14.09□□□□□ -0.15
HERC1-214ENST00000561400 RRAGDQ9NQL2 400 aaPredicted RBP14.09□□□□□ -0.15
HERC1-214ENST00000561400 PIH1D3Q9NQM4 214 aaKnown RBP14.09□□□□□ -0.15
HERC1-214ENST00000561400 ZNF541Q9H0D2 1346 aa14.08□□□□□ -0.15
HERC1-214ENST00000561400 VIL1P09327 827 aaKnown RBP14.08□□□□□ -0.16
HERC1-214ENST00000561400 MFSD14BQ5SR56 506 aa14.08□□□□□ -0.16
HERC1-214ENST00000561400 ABCF2Q9UG63 623 aa14.08□□□□□ -0.16
HERC1-214ENST00000561400 SALL1Q9NSC2 1324 aa14.08□□□□□ -0.16
HERC1-214ENST00000561400 PRDX5P30044 214 aa14.07□□□□□ -0.16
HERC1-214ENST00000561400 CIAPIN1Q6FI81 312 aa14.07□□□□□ -0.16
HERC1-214ENST00000561400 SDSP20132 328 aa14.07□□□□□ -0.16
HERC1-214ENST00000561400 EIF6P56537 245 aaKnown RBP14.07□□□□□ -0.16
HERC1-214ENST00000561400 SMAP1Q8IYB5 467 aaPredicted RBP14.07□□□□□ -0.16
HERC1-214ENST00000561400 ZBTB12Q9Y330 459 aaPredicted RBP14.07□□□□□ -0.16
HERC1-214ENST00000561400 TRIM6-TRIM34B2RNG4 842 aa14.06□□□□□ -0.16
HERC1-214ENST00000561400 TBC1D22AQ8WUA7 517 aa14.06□□□□□ -0.16
HERC1-214ENST00000561400 RILPL2Q969X0 211 aa14.06□□□□□ -0.16
HERC1-214ENST00000561400 TTF1Q15361 905 aaPredicted RBP14.06□□□□□ -0.16
HERC1-214ENST00000561400 BMP2KLQ5H9B9 411 aa14.06□□□□□ -0.16
HERC1-214ENST00000561400 RSBN1LQ6PCB5 846 aaPredicted RBP14.06□□□□□ -0.16
HERC1-214ENST00000561400 KBTBD3Q8NAB2 608 aa14.06□□□□□ -0.16
HERC1-214ENST00000561400 EVI5LQ96CN4 794 aa14.06□□□□□ -0.16
HERC1-214ENST00000561400 MYH2Q9UKX2 1941 aa14.05□□□□□ -0.16
HERC1-214ENST00000561400 IDH1O75874 414 aaKnown RBP14.05□□□□□ -0.16
HERC1-214ENST00000561400 CHGBP05060 677 aa14.05□□□□□ -0.16
HERC1-214ENST00000561400 FKBP1AP62942 108 aaKnown RBP14.05□□□□□ -0.16
HERC1-214ENST00000561400 TNIP1Q15025 636 aa14.05□□□□□ -0.16
HERC1-214ENST00000561400 ZNF384Q8TF68 577 aa14.05□□□□□ -0.16
HERC1-214ENST00000561400 GMLQ99445 158 aa14.05□□□□□ -0.16
HERC1-214ENST00000561400 LRP2BPQ9P2M1 347 aa14.05□□□□□ -0.16
HERC1-214ENST00000561400 GJA3Q9Y6H8 435 aa14.05□□□□□ -0.16
HERC1-214ENST00000561400 CNTROBQ8N137 903 aa14.05□□□□□ -0.16
HERC1-214ENST00000561400 ZGPATQ8N5A5 531 aaKnown RBP14.05□□□□□ -0.16
HERC1-214ENST00000561400 ADAMTSL1Q8N6G6 1762 aa14.04□□□□□ -0.16
HERC1-214ENST00000561400 F8W031 263 aaPredicted RBP14.04□□□□□ -0.16
HERC1-214ENST00000561400 DDNO94850 711 aaPredicted RBP14.04□□□□□ -0.16
HERC1-214ENST00000561400 LDHBP07195 334 aaKnown RBP14.04□□□□□ -0.16
HERC1-214ENST00000561400 SLFNL1Q499Z3 407 aa14.04□□□□□ -0.16
HERC1-214ENST00000561400 KIAA0825Q8IV33 1275 aa14.04□□□□□ -0.16
HERC1-214ENST00000561400 MMP14P50281 582 aa14.03□□□□□ -0.16
HERC1-214ENST00000561400 MECOMQ03112 1051 aa14.03□□□□□ -0.16
HERC1-214ENST00000561400 GPC2Q8N158 579 aa14.03□□□□□ -0.16
HERC1-214ENST00000561400 FSD1Q9BTV5 496 aa14.03□□□□□ -0.16
HERC1-214ENST00000561400 RAI14Q9P0K7 980 aa14.03□□□□□ -0.16
HERC1-214ENST00000561400 ZC3H4Q9UPT8 1303 aaKnown RBP14.03□□□□□ -0.16
HERC1-214ENST00000561400 MAST2Q6P0Q8 1798 aa14.03□□□□□ -0.16
HERC1-214ENST00000561400 SPTY2D1Q68D10 685 aaPredicted RBP14.03□□□□□ -0.16
HERC1-214ENST00000561400 AGBL3Q8NEM8 1001 aa14.03□□□□□ -0.16
HERC1-214ENST00000561400 MYO3BQ8WXR4 1341 aa14.03□□□□□ -0.16
HERC1-214ENST00000561400 NSUN4Q96CB9 384 aaKnown RBP14.03□□□□□ -0.16
HERC1-214ENST00000561400 SUGT1Q9Y2Z0 365 aa14.03□□□□□ -0.16
HERC1-214ENST00000561400 GMPSP49915 693 aaPredicted RBP14.02□□□□□ -0.16
HERC1-214ENST00000561400 MAP3K12Q12852 859 aa14.02□□□□□ -0.16
HERC1-214ENST00000561400 SLC9C2Q5TAH2 1124 aa14.02□□□□□ -0.16
HERC1-214ENST00000561400 TTF2Q9UNY4 1162 aaKnown RBP14.02□□□□□ -0.16
HERC1-214ENST00000561400 SHTN1A0MZ66 631 aa14.02□□□□□ -0.17
HERC1-214ENST00000561400 CLGNO14967 610 aa14.02□□□□□ -0.17
HERC1-214ENST00000561400 HMGB1P09429 215 aaKnown RBP14.02□□□□□ -0.17
HERC1-214ENST00000561400 SCNN1DP51172 638 aa14.02□□□□□ -0.17
HERC1-214ENST00000561400 IRX3P78415 501 aaPredicted RBP14.02□□□□□ -0.17
HERC1-214ENST00000561400 DIXDC1Q155Q3 683 aa14.02□□□□□ -0.17
HERC1-214ENST00000561400 DDRGK1Q96HY6 314 aa14.02□□□□□ -0.17
HERC1-214ENST00000561400 VGLL3A8MV65 326 aa14.01□□□□□ -0.17
HERC1-214ENST00000561400 PDE6AP16499 860 aa14.01□□□□□ -0.17
HERC1-214ENST00000561400 ADD2P35612 726 aa14.01□□□□□ -0.17
HERC1-214ENST00000561400 DZIP1Q86YF9 867 aaKnown RBP14.01□□□□□ -0.17
HERC1-214ENST00000561400 MAGEB6Q8N7X4 407 aa14.01□□□□□ -0.17
HERC1-214ENST00000561400 TCRBV5S4A2TA0A5A2 114 aa14□□□□□ -0.17
HERC1-214ENST00000561400 GLTPD2A6NH11 291 aa14□□□□□ -0.17
HERC1-214ENST00000561400 RPS12P25398 132 aaKnown RBP14□□□□□ -0.17
HERC1-214ENST00000561400 DPY19L2Q6NUT2 758 aa14□□□□□ -0.17
HERC1-214ENST00000561400 ADGRA1Q86SQ6 560 aa14□□□□□ -0.17
HERC1-214ENST00000561400 DPF2Q92785 391 aa14□□□□□ -0.17
HERC1-214ENST00000561400 DDX24Q9GZR7 859 aaKnown RBP eCLIP14□□□□□ -0.175e-7■■■□□ 19.2
HERC1-214ENST00000561400 ZNF532Q9HCE3 1301 aa14□□□□□ -0.17
HERC1-214ENST00000561400 USP17L8P0C7I0 530 aa14□□□□□ -0.17
HERC1-214ENST00000561400 FAM193AP78312 1265 aa14□□□□□ -0.17
HERC1-214ENST00000561400 UTP14CQ5TAP6 766 aaKnown RBP14□□□□□ -0.17
HERC1-214ENST00000561400 NAA16Q6N069 864 aaPredicted RBP14□□□□□ -0.17
HERC1-214ENST00000561400 RNF113AO15541 343 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms