RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 MAST3O60307 1309 aa24.49■■□□□ 1.51
TSPAN3-210ENST00000561277 APOBEC3FQ8IUX4 373 aaKnown RBP24.49■■□□□ 1.51
TSPAN3-210ENST00000561277 CCDC8Q9H0W5 538 aaPredicted RBP24.49■■□□□ 1.51
TSPAN3-210ENST00000561277 BCL11AQ9H165 835 aa24.49■■□□□ 1.51
TSPAN3-210ENST00000561277 IL1RAPL2Q9NP60 686 aa24.49■■□□□ 1.51
TSPAN3-210ENST00000561277 TLR7Q9NYK1 1049 aaKnown RBP24.49■■□□□ 1.51
TSPAN3-210ENST00000561277 PCNTO95613 3336 aa24.49■■□□□ 1.51
TSPAN3-210ENST00000561277 TTC39AQ5SRH9 613 aa24.48■■□□□ 1.51
TSPAN3-210ENST00000561277 PRAMEF18Q5VWM3 479 aa24.48■■□□□ 1.51
TSPAN3-210ENST00000561277 PI16Q6UXB8 463 aa24.48■■□□□ 1.51
TSPAN3-210ENST00000561277 RHPN1Q8TCX5 695 aa24.48■■□□□ 1.51
TSPAN3-210ENST00000561277 TEKT1Q969V4 418 aa24.48■■□□□ 1.51
TSPAN3-210ENST00000561277 EAF2Q96CJ1 260 aaPredicted RBP24.48■■□□□ 1.51
TSPAN3-210ENST00000561277 VEZTQ9HBM0 779 aa24.48■■□□□ 1.51
TSPAN3-210ENST00000561277 SALL1Q9NSC2 1324 aa24.48■■□□□ 1.51
TSPAN3-210ENST00000561277 LDHBP07195 334 aaKnown RBP24.47■■□□□ 1.51
TSPAN3-210ENST00000561277 ARID4AP29374 1257 aaPredicted RBP24.47■■□□□ 1.51
TSPAN3-210ENST00000561277 HMG20BQ9P0W2 317 aa24.47■■□□□ 1.51
TSPAN3-210ENST00000561277 ABCF2Q9UG63 623 aa24.47■■□□□ 1.51
TSPAN3-210ENST00000561277 DBNLQ9UJU6 430 aaKnown RBP24.47■■□□□ 1.51
TSPAN3-210ENST00000561277 CNTNAP1P78357 1384 aa24.47■■□□□ 1.51
TSPAN3-210ENST00000561277 CCDC158Q5M9N0 1113 aa24.46■■□□□ 1.51
TSPAN3-210ENST00000561277 AACSQ86V21 672 aa24.46■■□□□ 1.51
TSPAN3-210ENST00000561277 TDRD3Q9H7E2 651 aaKnown RBP24.46■■□□□ 1.51
TSPAN3-210ENST00000561277 PDS5AQ29RF7 1337 aaKnown RBP24.46■■□□□ 1.51
TSPAN3-210ENST00000561277 ZBTB22O15209 634 aa24.46■■□□□ 1.51
TSPAN3-210ENST00000561277 UQCRFS1P1P0C7P4 283 aa24.46■■□□□ 1.51
TSPAN3-210ENST00000561277 HDLBPQ00341 1268 aaKnown RBP24.46■■□□□ 1.51
TSPAN3-210ENST00000561277 PAXIP1Q6ZW49 1069 aaPredicted RBP24.46■■□□□ 1.51
TSPAN3-210ENST00000561277 ZGPATQ8N5A5 531 aaKnown RBP24.46■■□□□ 1.51
TSPAN3-210ENST00000561277 SPATA5Q8NB90 893 aa24.46■■□□□ 1.51
TSPAN3-210ENST00000561277 KIF1BPQ96EK5 621 aa24.46■■□□□ 1.51
TSPAN3-210ENST00000561277 TLL2Q9Y6L7 1015 aa24.46■■□□□ 1.51
TSPAN3-210ENST00000561277 MCAMP43121 646 aa24.45■■□□□ 1.5
TSPAN3-210ENST00000561277 DIXDC1Q155Q3 683 aa24.45■■□□□ 1.5
TSPAN3-210ENST00000561277 RASSF10A6NK89 507 aa24.44■■□□□ 1.5
TSPAN3-210ENST00000561277 DEFB115Q30KQ5 88 aa24.44■■□□□ 1.5
TSPAN3-210ENST00000561277 SAPCD2Q86UD0 394 aa24.44■■□□□ 1.5
TSPAN3-210ENST00000561277 GBA2Q9HCG7 927 aaPredicted RBP24.44■■□□□ 1.5
TSPAN3-210ENST00000561277 ZNF70Q9UC06 446 aaPredicted RBP24.44■■□□□ 1.5
TSPAN3-210ENST00000561277 RAB11FIP3O75154 756 aa24.43■■□□□ 1.5
TSPAN3-210ENST00000561277 SPDYE2Q495Y8 402 aa24.43■■□□□ 1.5
TSPAN3-210ENST00000561277 CLASRPQ8N2M8 674 aaKnown RBP24.43■■□□□ 1.5
TSPAN3-210ENST00000561277 ZDHHC15Q96MV8 337 aa24.43■■□□□ 1.5
TSPAN3-210ENST00000561277 DEFB129Q9H1M3 183 aa24.43■■□□□ 1.5
TSPAN3-210ENST00000561277 SNRKQ9NRH2 765 aa24.43■■□□□ 1.5
TSPAN3-210ENST00000561277 SUPT16HQ9Y5B9 1047 aaKnown RBP24.43■■□□□ 1.5
TSPAN3-210ENST00000561277 GRM1Q13255 1194 aa24.42■■□□□ 1.5
TSPAN3-210ENST00000561277 DZIP1Q86YF9 867 aaKnown RBP24.42■■□□□ 1.5
TSPAN3-210ENST00000561277 C2orf69Q8N8R5 385 aa24.42■■□□□ 1.5
TSPAN3-210ENST00000561277 PCDHB15Q9Y5E8 787 aa24.42■■□□□ 1.5
TSPAN3-210ENST00000561277 HHIPL2Q6UWX4 724 aa24.42■■□□□ 1.5
TSPAN3-210ENST00000561277 TBC1D9Q6ZT07 1266 aa24.42■■□□□ 1.5
TSPAN3-210ENST00000561277 MRIQ9BWK5 157 aa24.42■■□□□ 1.5
TSPAN3-210ENST00000561277 VEGFBP49765 207 aa24.41■■□□□ 1.5
TSPAN3-210ENST00000561277 CACNB3P54284 484 aa24.41■■□□□ 1.5
TSPAN3-210ENST00000561277 HUNKP57058 714 aa24.41■■□□□ 1.5
TSPAN3-210ENST00000561277 APOBEC3HQ6NTF7 200 aaKnown RBP24.41■■□□□ 1.5
TSPAN3-210ENST00000561277 DAGLAQ9Y4D2 1042 aa24.41■■□□□ 1.5
TSPAN3-210ENST00000561277 TCP10L2B9ZVM9 353 aa24.4■■□□□ 1.5
TSPAN3-210ENST00000561277 NF2P35240 595 aa24.4■■□□□ 1.5
TSPAN3-210ENST00000561277 SPTY2D1Q68D10 685 aaPredicted RBP24.4■■□□□ 1.5
TSPAN3-210ENST00000561277 ERICH6Q7L0X2 663 aa24.4■■□□□ 1.5
TSPAN3-210ENST00000561277 TNFAIP1Q13829 316 aa24.39■■□□□ 1.5
TSPAN3-210ENST00000561277 CYP4F22Q6NT55 531 aa24.39■■□□□ 1.5
TSPAN3-210ENST00000561277 IFIT2P09913 472 aaKnown RBP24.38■■□□□ 1.49
TSPAN3-210ENST00000561277 RASA3Q14644 834 aa24.38■■□□□ 1.49
TSPAN3-210ENST00000561277 ZNF512BQ96KM6 892 aaPredicted RBP24.38■■□□□ 1.49
TSPAN3-210ENST00000561277 LRRCC1Q9C099 1032 aa24.38■■□□□ 1.49
TSPAN3-210ENST00000561277 PPP2R3BQ9Y5P8 575 aa24.38■■□□□ 1.49
TSPAN3-210ENST00000561277 PAPPA2Q9BXP8 1791 aa24.38■■□□□ 1.49
TSPAN3-210ENST00000561277 ZAP70P43403 619 aa24.37■■□□□ 1.49
TSPAN3-210ENST00000561277 PRKG1Q13976 671 aa24.37■■□□□ 1.49
TSPAN3-210ENST00000561277 TTLL12Q14166 644 aaPredicted RBP24.37■■□□□ 1.49
TSPAN3-210ENST00000561277 MOB2Q70IA6 237 aa24.37■■□□□ 1.49
TSPAN3-210ENST00000561277 JMYQ8N9B5 988 aa24.37■■□□□ 1.49
TSPAN3-210ENST00000561277 TMOD2Q9NZR1 351 aa24.37■■□□□ 1.49
TSPAN3-210ENST00000561277 RAI14Q9P0K7 980 aa24.37■■□□□ 1.49
TSPAN3-210ENST00000561277 AKAP11Q9UKA4 1901 aa24.37■■□□□ 1.49
TSPAN3-210ENST00000561277 MECOMQ03112 1051 aa24.37■■□□□ 1.49
TSPAN3-210ENST00000561277 CAPNS2Q96L46 248 aa24.37■■□□□ 1.49
TSPAN3-210ENST00000561277 LRP2BPQ9P2M1 347 aa24.37■■□□□ 1.49
TSPAN3-210ENST00000561277 MYH2Q9UKX2 1941 aa24.36■■□□□ 1.49
TSPAN3-210ENST00000561277 SMARCA5O60264 1052 aaPredicted RBP24.36■■□□□ 1.49
TSPAN3-210ENST00000561277 WDR33Q9C0J8 1336 aaKnown RBP24.36■■□□□ 1.49
TSPAN3-210ENST00000561277 DCTPP1Q9H773 170 aa24.36■■□□□ 1.49
TSPAN3-210ENST00000561277 CYP2E1P05181 493 aaPredicted RBP24.35■■□□□ 1.49
TSPAN3-210ENST00000561277 ECE1P42892 770 aa24.35■■□□□ 1.49
TSPAN3-210ENST00000561277 TNNI2P48788 182 aa24.35■■□□□ 1.49
TSPAN3-210ENST00000561277 SLF2Q8IX21 1173 aa24.35■■□□□ 1.49
TSPAN3-210ENST00000561277 NDUFB9Q9Y6M9 179 aa24.35■■□□□ 1.49
TSPAN3-210ENST00000561277 SSC5DA1L4H1 1573 aa24.35■■□□□ 1.49
TSPAN3-210ENST00000561277 FKBP1BP68106 108 aa24.34■■□□□ 1.49
TSPAN3-210ENST00000561277 NBPF12Q5TAG4 269 aaPredicted RBP24.34■■□□□ 1.49
TSPAN3-210ENST00000561277 CDC42EP5Q6NZY7 148 aa24.34■■□□□ 1.49
TSPAN3-210ENST00000561277 ZNF384Q8TF68 577 aa24.34■■□□□ 1.49
TSPAN3-210ENST00000561277 HHIPL1Q96JK4 782 aa24.34■■□□□ 1.49
TSPAN3-210ENST00000561277 TMEM39BQ9GZU3 492 aa24.34■■□□□ 1.49
TSPAN3-210ENST00000561277 FZD1Q9UP38 647 aa24.34■■□□□ 1.49
TSPAN3-210ENST00000561277 MROH7-TTC4A0A0A0MT08 1334 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms