RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 SNRPNP63162 240 aaKnown RBP6.92□□□□□ -1.3
ZEB1-220ENST00000560909 MVPQ14764 893 aaKnown RBP6.92□□□□□ -1.3
ZEB1-220ENST00000560909 HLFQ16534 295 aa6.92□□□□□ -1.3
ZEB1-220ENST00000560909 HSP90AB3PQ58FF7 597 aa6.92□□□□□ -1.3
ZEB1-220ENST00000560909 TRAPPC3LQ5T215 181 aa6.92□□□□□ -1.3
ZEB1-220ENST00000560909 DZIP3Q86Y13 1208 aaKnown RBP6.92□□□□□ -1.3
ZEB1-220ENST00000560909 TMEM57Q8N5G2 664 aa6.92□□□□□ -1.3
ZEB1-220ENST00000560909 CCDC191Q8NCU4 936 aa6.92□□□□□ -1.3
ZEB1-220ENST00000560909 PANK1Q8TE04 598 aa6.92□□□□□ -1.3
ZEB1-220ENST00000560909 FRAT1Q92837 279 aaPredicted RBP6.92□□□□□ -1.3
ZEB1-220ENST00000560909 AK7Q96M32 723 aa6.92□□□□□ -1.3
ZEB1-220ENST00000560909 USP44Q9H0E7 712 aa6.92□□□□□ -1.3
ZEB1-220ENST00000560909 ZBTB40Q9NUA8 1239 aa6.92□□□□□ -1.3
ZEB1-220ENST00000560909 USP42Q9H9J4 1324 aaKnown RBP6.92□□□□□ -1.3
ZEB1-220ENST00000560909 NEURL1BA8MQ27 555 aa6.91□□□□□ -1.3
ZEB1-220ENST00000560909 H7C1W4 665 aa6.91□□□□□ -1.3
ZEB1-220ENST00000560909 GYS1P13807 737 aa6.91□□□□□ -1.3
ZEB1-220ENST00000560909 VARSP26640 1264 aaKnown RBP6.91□□□□□ -1.3
ZEB1-220ENST00000560909 TM4SF1P30408 202 aa6.91□□□□□ -1.3
ZEB1-220ENST00000560909 AIMP1Q12904 312 aaKnown RBP6.91□□□□□ -1.3
ZEB1-220ENST00000560909 GCKRQ14397 625 aa6.91□□□□□ -1.3
ZEB1-220ENST00000560909 KIF6Q6ZMV9 814 aa6.91□□□□□ -1.3
ZEB1-220ENST00000560909 RIC3Q7Z5B4 369 aa6.91□□□□□ -1.3
ZEB1-220ENST00000560909 COL23A1Q86Y22 540 aaPredicted RBP6.91□□□□□ -1.3
ZEB1-220ENST00000560909 SRCIN1Q9C0H9 1055 aa6.91□□□□□ -1.3
ZEB1-220ENST00000560909 DDX19BQ9UMR2 479 aa6.91□□□□□ -1.3
ZEB1-220ENST00000560909 TBC1D2BQ9UPU7 963 aa6.91□□□□□ -1.3
ZEB1-220ENST00000560909 PNPLA7Q6ZV29 1317 aa6.91□□□□□ -1.3
ZEB1-220ENST00000560909 OATP04181 439 aa6.9□□□□□ -1.3
ZEB1-220ENST00000560909 MLLT3P42568 568 aaPredicted RBP6.9□□□□□ -1.3
ZEB1-220ENST00000560909 TXKP42681 527 aa6.9□□□□□ -1.3
ZEB1-220ENST00000560909 LINC01559Q495D7 138 aa6.9□□□□□ -1.3
ZEB1-220ENST00000560909 PARP10Q53GL7 1025 aa6.9□□□□□ -1.3
ZEB1-220ENST00000560909 SMIM5Q71RC9 77 aa6.9□□□□□ -1.3
ZEB1-220ENST00000560909 CD163Q86VB7 1156 aa6.9□□□□□ -1.3
ZEB1-220ENST00000560909 NLRP10Q86W26 655 aa6.9□□□□□ -1.3
ZEB1-220ENST00000560909 FTSJ3Q8IY81 847 aaKnown RBP6.9□□□□□ -1.3
ZEB1-220ENST00000560909 CLUAP1Q96AJ1 413 aa6.9□□□□□ -1.3
ZEB1-220ENST00000560909 CRBNQ96SW2 442 aa6.9□□□□□ -1.3
ZEB1-220ENST00000560909 CHMP4BQ9H444 224 aaKnown RBP6.9□□□□□ -1.3
ZEB1-220ENST00000560909 ZBTB3Q9H5J0 574 aa6.9□□□□□ -1.3
ZEB1-220ENST00000560909 STK32BQ9NY57 414 aa6.9□□□□□ -1.3
ZEB1-220ENST00000560909 TFCP2L1Q9NZI6 479 aa6.9□□□□□ -1.3
ZEB1-220ENST00000560909 COG6Q9Y2V7 657 aa6.9□□□□□ -1.3
ZEB1-220ENST00000560909 UBR3Q6ZT12 1888 aa6.9□□□□□ -1.31
ZEB1-220ENST00000560909 PCCAP05165 728 aaPredicted RBP6.89□□□□□ -1.31
ZEB1-220ENST00000560909 RFC4P35249 363 aa6.89□□□□□ -1.31
ZEB1-220ENST00000560909 NEXNQ0ZGT2 675 aa6.89□□□□□ -1.31
ZEB1-220ENST00000560909 SLC10A5Q5PT55 438 aa6.89□□□□□ -1.31
ZEB1-220ENST00000560909 USPL1Q5W0Q7 1092 aa6.89□□□□□ -1.31
ZEB1-220ENST00000560909 NPM2Q86SE8 214 aaKnown RBP6.89□□□□□ -1.31
ZEB1-220ENST00000560909 NLGN1Q8N2Q7 840 aa6.89□□□□□ -1.31
ZEB1-220ENST00000560909 KAZALD1Q96I82 304 aa6.89□□□□□ -1.31
ZEB1-220ENST00000560909 MYD88Q99836 296 aa6.89□□□□□ -1.31
ZEB1-220ENST00000560909 NUDT12Q9BQG2 462 aa6.89□□□□□ -1.31
ZEB1-220ENST00000560909 PLA2G12BQ9BX93 195 aa6.89□□□□□ -1.31
ZEB1-220ENST00000560909 CWC25Q9NXE8 425 aaPredicted RBP6.89□□□□□ -1.31
ZEB1-220ENST00000560909 DAXXQ9UER7 740 aaPredicted RBP6.89□□□□□ -1.31
ZEB1-220ENST00000560909 SRP68Q9UHB9 627 aaKnown RBP6.89□□□□□ -1.31
ZEB1-220ENST00000560909 ZNF652Q9Y2D9 606 aa6.89□□□□□ -1.31
ZEB1-220ENST00000560909 UBN2Q6ZU65 1347 aa6.89□□□□□ -1.31
ZEB1-220ENST00000560909 CDHR2Q9BYE9 1310 aa6.88□□□□□ -1.31
ZEB1-220ENST00000560909 ATP5J2-PTCD1G3V325 749 aa6.88□□□□□ -1.31
ZEB1-220ENST00000560909 GRM8O00222 908 aa6.88□□□□□ -1.31
ZEB1-220ENST00000560909 NTSR2O95665 410 aa6.88□□□□□ -1.31
ZEB1-220ENST00000560909 GNAI3P08754 354 aa6.88□□□□□ -1.31
ZEB1-220ENST00000560909 NBPF7P0C2Y1 421 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-220ENST00000560909 MTX1Q13505 466 aa6.88□□□□□ -1.31
ZEB1-220ENST00000560909 NFIXQ14938 502 aa6.88□□□□□ -1.31
ZEB1-220ENST00000560909 GRIN2CQ14957 1233 aa6.88□□□□□ -1.31
ZEB1-220ENST00000560909 CWF19L2Q2TBE0 894 aaKnown RBP6.88□□□□□ -1.31
ZEB1-220ENST00000560909 RABL6Q3YEC7 729 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-220ENST00000560909 TBC1D9BQ66K14 1250 aa6.88□□□□□ -1.31
ZEB1-220ENST00000560909 SLC4A10Q6U841 1118 aa6.88□□□□□ -1.31
ZEB1-220ENST00000560909 ZBTB38Q8NAP3 1195 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-220ENST00000560909 EXOC6Q8TAG9 804 aa6.88□□□□□ -1.31
ZEB1-220ENST00000560909 MEIS3Q99687 375 aa6.88□□□□□ -1.31
ZEB1-220ENST00000560909 TSEN34Q9BSV6 310 aaKnown RBP6.88□□□□□ -1.31
ZEB1-220ENST00000560909 HDAC5Q9UQL6 1122 aa6.88□□□□□ -1.31
ZEB1-220ENST00000560909 QSER1Q2KHR3 1735 aa6.87□□□□□ -1.31
ZEB1-220ENST00000560909 NUP188Q5SRE5 1749 aa6.87□□□□□ -1.31
ZEB1-220ENST00000560909 TESPA1A2RU30 521 aaPredicted RBP6.87□□□□□ -1.31
ZEB1-220ENST00000560909 KLRG2A4D1S0 409 aaPredicted RBP6.87□□□□□ -1.31
ZEB1-220ENST00000560909 SEMA3EO15041 775 aa6.87□□□□□ -1.31
ZEB1-220ENST00000560909 CSF1RP07333 972 aa6.87□□□□□ -1.31
ZEB1-220ENST00000560909 NR3C2P08235 984 aa6.87□□□□□ -1.31
ZEB1-220ENST00000560909 JUNDP17535 347 aa6.87□□□□□ -1.31
ZEB1-220ENST00000560909 SUSD4Q5VX71 490 aa6.87□□□□□ -1.31
ZEB1-220ENST00000560909 SMYD5Q6GMV2 418 aa6.87□□□□□ -1.31
ZEB1-220ENST00000560909 ITPRIPQ8IWB1 547 aa6.87□□□□□ -1.31
ZEB1-220ENST00000560909 MKL2Q9ULH7 1088 aa6.87□□□□□ -1.31
ZEB1-220ENST00000560909 NIP7Q9Y221 180 aaKnown RBP eCLIP6.87□□□□□ -1.31
ZEB1-220ENST00000560909 ZNF330Q9Y3S2 320 aaPredicted RBP6.87□□□□□ -1.31
ZEB1-220ENST00000560909 PCDHB15Q9Y5E8 787 aa6.87□□□□□ -1.31
ZEB1-220ENST00000560909 N4BP2Q86UW6 1770 aaPredicted RBP6.87□□□□□ -1.31
ZEB1-220ENST00000560909 RIC1Q4ADV7 1423 aa6.86□□□□□ -1.31
ZEB1-220ENST00000560909 SH3TC1Q8TE82 1336 aa6.86□□□□□ -1.31
ZEB1-220ENST00000560909 POLRMTO00411 1230 aaKnown RBP6.86□□□□□ -1.31
ZEB1-220ENST00000560909 GNAI2P04899 355 aa6.86□□□□□ -1.31
ZEB1-220ENST00000560909 FOXO4P98177 505 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms