RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 RAD17O75943 681 aa16.47■□□□□ 0.23
HMBOX1-213ENST00000560269 CHGBP05060 677 aa16.47■□□□□ 0.23
HMBOX1-213ENST00000560269 MECOMQ03112 1051 aa16.47■□□□□ 0.23
HMBOX1-213ENST00000560269 NMIQ13287 307 aaPredicted RBP16.47■□□□□ 0.23
HMBOX1-213ENST00000560269 TNIP1Q15025 636 aa16.47■□□□□ 0.23
HMBOX1-213ENST00000560269 ZMYM1Q5SVZ6 1142 aa16.47■□□□□ 0.23
HMBOX1-213ENST00000560269 CIAPIN1Q6FI81 312 aa16.47■□□□□ 0.23
HMBOX1-213ENST00000560269 RSBN1LQ6PCB5 846 aaPredicted RBP16.47■□□□□ 0.23
HMBOX1-213ENST00000560269 MAGEB6Q8N7X4 407 aa16.47■□□□□ 0.23
HMBOX1-213ENST00000560269 ZNF384Q8TF68 577 aa16.47■□□□□ 0.23
HMBOX1-213ENST00000560269 APPBP2Q92624 585 aa16.47■□□□□ 0.23
HMBOX1-213ENST00000560269 MXD3Q9BW11 206 aa16.47■□□□□ 0.23
HMBOX1-213ENST00000560269 HELLSQ9NRZ9 838 aa16.47■□□□□ 0.23
HMBOX1-213ENST00000560269 RAD50Q92878 1312 aa16.46■□□□□ 0.23
HMBOX1-213ENST00000560269 ZNF532Q9HCE3 1301 aa16.46■□□□□ 0.23
HMBOX1-213ENST00000560269 EIF6P56537 245 aaKnown RBP16.46■□□□□ 0.23
HMBOX1-213ENST00000560269 SLFNL1Q499Z3 407 aa16.46■□□□□ 0.23
HMBOX1-213ENST00000560269 NAA16Q6N069 864 aaPredicted RBP16.46■□□□□ 0.23
HMBOX1-213ENST00000560269 DZIP1Q86YF9 867 aaKnown RBP16.46■□□□□ 0.23
HMBOX1-213ENST00000560269 RUFY2Q8WXA3 655 aa16.46■□□□□ 0.23
HMBOX1-213ENST00000560269 FAM227BQ96M60 508 aa16.46■□□□□ 0.23
HMBOX1-213ENST00000560269 GMLQ99445 158 aa16.46■□□□□ 0.23
HMBOX1-213ENST00000560269 ESYT1Q9BSJ8 1104 aa16.46■□□□□ 0.23
HMBOX1-213ENST00000560269 RNF181Q9P0P0 153 aa16.46■□□□□ 0.23
HMBOX1-213ENST00000560269 MAST3O60307 1309 aa16.45■□□□□ 0.22
HMBOX1-213ENST00000560269 MYH2Q9UKX2 1941 aa16.45■□□□□ 0.22
HMBOX1-213ENST00000560269 A0A0D9SFI3 127 aa16.45■□□□□ 0.22
HMBOX1-213ENST00000560269 CYP7A1P22680 504 aa16.45■□□□□ 0.22
HMBOX1-213ENST00000560269 GSTO1P78417 241 aa16.45■□□□□ 0.22
HMBOX1-213ENST00000560269 C9orf131Q5VYM1 1079 aa16.45■□□□□ 0.22
HMBOX1-213ENST00000560269 CWC27Q6UX04 472 aaKnown RBP16.45■□□□□ 0.22
HMBOX1-213ENST00000560269 AGBL3Q8NEM8 1001 aa16.45■□□□□ 0.22
HMBOX1-213ENST00000560269 SGSM2O43147 1006 aa16.44■□□□□ 0.22
HMBOX1-213ENST00000560269 MCMDC2Q4G0Z9 681 aa16.44■□□□□ 0.22
HMBOX1-213ENST00000560269 SLF2Q8IX21 1173 aa16.44■□□□□ 0.22
HMBOX1-213ENST00000560269 OSBP2Q969R2 916 aa16.44■□□□□ 0.22
HMBOX1-213ENST00000560269 FAM163AQ96GL9 167 aaPredicted RBP16.44■□□□□ 0.22
HMBOX1-213ENST00000560269 MRIQ9BWK5 157 aa16.44■□□□□ 0.22
HMBOX1-213ENST00000560269 BACH2Q9BYV9 841 aa16.44■□□□□ 0.22
HMBOX1-213ENST00000560269 IL25Q9H293 177 aa16.44■□□□□ 0.22
HMBOX1-213ENST00000560269 TTF2Q9UNY4 1162 aaKnown RBP16.44■□□□□ 0.22
HMBOX1-213ENST00000560269 ZNF541Q9H0D2 1346 aa16.44■□□□□ 0.22
HMBOX1-213ENST00000560269 ZC3H4Q9UPT8 1303 aaKnown RBP16.44■□□□□ 0.22
HMBOX1-213ENST00000560269 LDHCP07864 332 aa16.43■□□□□ 0.22
HMBOX1-213ENST00000560269 RPS12P25398 132 aaKnown RBP16.43■□□□□ 0.22
HMBOX1-213ENST00000560269 HDLBPQ00341 1268 aaKnown RBP16.43■□□□□ 0.22
HMBOX1-213ENST00000560269 ADGRA1Q86SQ6 560 aa16.43■□□□□ 0.22
HMBOX1-213ENST00000560269 SEC62Q99442 399 aaKnown RBP16.43■□□□□ 0.22
HMBOX1-213ENST00000560269 PUS7LQ9H0K6 701 aaKnown RBP16.43■□□□□ 0.22
HMBOX1-213ENST00000560269 MROH7-TTC4A0A0A0MT08 1334 aa16.43■□□□□ 0.22
HMBOX1-213ENST00000560269 GAKO14976 1311 aa16.43■□□□□ 0.22
HMBOX1-213ENST00000560269 EIF5BO60841 1220 aaKnown RBP16.42■□□□□ 0.22
HMBOX1-213ENST00000560269 MMP14P50281 582 aa16.42■□□□□ 0.22
HMBOX1-213ENST00000560269 DIXDC1Q155Q3 683 aa16.42■□□□□ 0.22
HMBOX1-213ENST00000560269 HHIPL2Q6UWX4 724 aa16.42■□□□□ 0.22
HMBOX1-213ENST00000560269 KIAA0825Q8IV33 1275 aa16.42■□□□□ 0.22
HMBOX1-213ENST00000560269 ADAMTSL1Q8N6G6 1762 aa16.41■□□□□ 0.22
HMBOX1-213ENST00000560269 F8W031 263 aaPredicted RBP16.41■□□□□ 0.22
HMBOX1-213ENST00000560269 M0R2C6 588 aa16.41■□□□□ 0.22
HMBOX1-213ENST00000560269 ZNF589Q86UQ0 364 aaPredicted RBP16.41■□□□□ 0.22
HMBOX1-213ENST00000560269 GPC2Q8N158 579 aa16.41■□□□□ 0.22
HMBOX1-213ENST00000560269 DPF2Q92785 391 aa16.41■□□□□ 0.22
HMBOX1-213ENST00000560269 RIOK1Q9BRS2 568 aaKnown RBP16.41■□□□□ 0.22
HMBOX1-213ENST00000560269 SERPINA10Q9UK55 444 aa16.41■□□□□ 0.22
HMBOX1-213ENST00000560269 ZBTB12Q9Y330 459 aaPredicted RBP16.41■□□□□ 0.22
HMBOX1-213ENST00000560269 CCDC171Q6TFL3 1326 aa16.41■□□□□ 0.22
HMBOX1-213ENST00000560269 GPR75-ASB3A0A0A6YYF3 556 aa16.4■□□□□ 0.22
HMBOX1-213ENST00000560269 MAGEB6P1A0A0J9YX57 407 aa16.4■□□□□ 0.22
HMBOX1-213ENST00000560269 DCAF8L1A6NGE4 600 aa16.4■□□□□ 0.22
HMBOX1-213ENST00000560269 CRKP46108 304 aa16.4■□□□□ 0.22
HMBOX1-213ENST00000560269 SCNN1DP51172 638 aa16.4■□□□□ 0.22
HMBOX1-213ENST00000560269 MFAP1P55081 439 aaKnown RBP16.4■□□□□ 0.22
HMBOX1-213ENST00000560269 PPP4CP60510 307 aa16.4■□□□□ 0.22
HMBOX1-213ENST00000560269 TEKT1Q969V4 418 aa16.4■□□□□ 0.22
HMBOX1-213ENST00000560269 DAGLAQ9Y4D2 1042 aa16.4■□□□□ 0.22
HMBOX1-213ENST00000560269 GJA3Q9Y6H8 435 aa16.4■□□□□ 0.22
HMBOX1-213ENST00000560269 GPAA1O43292 621 aa16.39■□□□□ 0.21
HMBOX1-213ENST00000560269 MBD4O95243 580 aa16.39■□□□□ 0.21
HMBOX1-213ENST00000560269 SEC24BO95487 1268 aa16.39■□□□□ 0.21
HMBOX1-213ENST00000560269 USP17L8P0C7I0 530 aa16.39■□□□□ 0.21
HMBOX1-213ENST00000560269 GMPSP49915 693 aaPredicted RBP16.39■□□□□ 0.21
HMBOX1-213ENST00000560269 CCDC129Q6ZRS4 1044 aa16.39■□□□□ 0.21
HMBOX1-213ENST00000560269 CERS3Q8IU89 383 aa16.39■□□□□ 0.21
HMBOX1-213ENST00000560269 MIGA1Q8NAN2 632 aa16.39■□□□□ 0.21
HMBOX1-213ENST00000560269 AIDAQ96BJ3 306 aa16.39■□□□□ 0.21
HMBOX1-213ENST00000560269 ZDHHC15Q96MV8 337 aa16.39■□□□□ 0.21
HMBOX1-213ENST00000560269 STRBPQ96SI9 672 aaKnown RBP16.39■□□□□ 0.21
HMBOX1-213ENST00000560269 HDAC9Q9UKV0 1011 aa16.39■□□□□ 0.21
HMBOX1-213ENST00000560269 EPB41L2O43491 1005 aaKnown RBP16.38■□□□□ 0.21
HMBOX1-213ENST00000560269 REC8O95072 547 aa16.38■□□□□ 0.21
HMBOX1-213ENST00000560269 BAG3O95817 575 aa16.38■□□□□ 0.21
HMBOX1-213ENST00000560269 ZNF280AP59817 542 aaPredicted RBP16.38■□□□□ 0.21
HMBOX1-213ENST00000560269 DYNLL1P63167 89 aaKnown RBP16.38■□□□□ 0.21
HMBOX1-213ENST00000560269 LCORLQ8N3X6 602 aa16.38■□□□□ 0.21
HMBOX1-213ENST00000560269 OGFOD1Q8N543 542 aa16.38■□□□□ 0.21
HMBOX1-213ENST00000560269 ARMT1Q9H993 441 aa16.38■□□□□ 0.21
HMBOX1-213ENST00000560269 AATFQ9NY61 560 aaKnown RBP eCLIP16.38■□□□□ 0.21
HMBOX1-213ENST00000560269 BTDP43251 543 aa16.37■□□□□ 0.21
HMBOX1-213ENST00000560269 MTMR14Q8NCE2 650 aa16.37■□□□□ 0.21
HMBOX1-213ENST00000560269 NOL10Q9BSC4 688 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms