RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ZBTB12Q9Y330 459 aaPredicted RBP19.96■□□□□ 0.79
TPM1-219ENST00000559397 SPTY2D1Q68D10 685 aaPredicted RBP19.95■□□□□ 0.78
TPM1-219ENST00000559397 USP26Q9BXU7 913 aa19.95■□□□□ 0.78
TPM1-219ENST00000559397 LRP2BPQ9P2M1 347 aa19.95■□□□□ 0.78
TPM1-219ENST00000559397 MYH7P12883 1935 aa19.95■□□□□ 0.78
TPM1-219ENST00000559397 REC8O95072 547 aa19.94■□□□□ 0.78
TPM1-219ENST00000559397 LDHBP07195 334 aaKnown RBP19.94■□□□□ 0.78
TPM1-219ENST00000559397 GPC2Q8N158 579 aa19.94■□□□□ 0.78
TPM1-219ENST00000559397 AGBL3Q8NEM8 1001 aa19.94■□□□□ 0.78
TPM1-219ENST00000559397 ZNF384Q8TF68 577 aa19.94■□□□□ 0.78
TPM1-219ENST00000559397 GJA3Q9Y6H8 435 aa19.94■□□□□ 0.78
TPM1-219ENST00000559397 IGSF3O75054 1194 aa19.94■□□□□ 0.78
TPM1-219ENST00000559397 IDH1O75874 414 aaKnown RBP19.94■□□□□ 0.78
TPM1-219ENST00000559397 NSUN4Q96CB9 384 aaKnown RBP19.94■□□□□ 0.78
TPM1-219ENST00000559397 FSD1Q9BTV5 496 aa19.94■□□□□ 0.78
TPM1-219ENST00000559397 MAST2Q6P0Q8 1798 aa19.93■□□□□ 0.78
TPM1-219ENST00000559397 MECOMQ03112 1051 aa19.93■□□□□ 0.78
TPM1-219ENST00000559397 MAP3K12Q12852 859 aa19.93■□□□□ 0.78
TPM1-219ENST00000559397 KIAA0825Q8IV33 1275 aa19.93■□□□□ 0.78
TPM1-219ENST00000559397 RAI14Q9P0K7 980 aa19.93■□□□□ 0.78
TPM1-219ENST00000559397 F8W031 263 aaPredicted RBP19.92■□□□□ 0.78
TPM1-219ENST00000559397 CHGBP05060 677 aa19.92■□□□□ 0.78
TPM1-219ENST00000559397 RPS12P25398 132 aaKnown RBP19.92■□□□□ 0.78
TPM1-219ENST00000559397 TICAM2Q86XR7 235 aa19.92■□□□□ 0.78
TPM1-219ENST00000559397 TTF2Q9UNY4 1162 aaKnown RBP19.92■□□□□ 0.78
TPM1-219ENST00000559397 DDNO94850 711 aaPredicted RBP19.91■□□□□ 0.78
TPM1-219ENST00000559397 ADD2P35612 726 aa19.91■□□□□ 0.78
TPM1-219ENST00000559397 GMPSP49915 693 aaPredicted RBP19.91■□□□□ 0.78
TPM1-219ENST00000559397 KIF2CQ99661 725 aa19.91■□□□□ 0.78
TPM1-219ENST00000559397 RFX7Q2KHR2 1363 aa19.91■□□□□ 0.78
TPM1-219ENST00000559397 TCRBV5S4A2TA0A5A2 114 aa19.91■□□□□ 0.78
TPM1-219ENST00000559397 EPB41L2O43491 1005 aaKnown RBP19.91■□□□□ 0.78
TPM1-219ENST00000559397 PDE6AP16499 860 aa19.91■□□□□ 0.78
TPM1-219ENST00000559397 SLFNL1Q499Z3 407 aa19.91■□□□□ 0.78
TPM1-219ENST00000559397 SLC9C2Q5TAH2 1124 aa19.91■□□□□ 0.78
TPM1-219ENST00000559397 DZIP1Q86YF9 867 aaKnown RBP19.91■□□□□ 0.78
TPM1-219ENST00000559397 MAGEB6Q8N7X4 407 aa19.91■□□□□ 0.78
TPM1-219ENST00000559397 DPF2Q92785 391 aa19.91■□□□□ 0.78
TPM1-219ENST00000559397 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.91■□□□□ 0.78
TPM1-219ENST00000559397 MYH2Q9UKX2 1941 aa19.9■□□□□ 0.78
TPM1-219ENST00000559397 GLTPD2A6NH11 291 aa19.9■□□□□ 0.78
TPM1-219ENST00000559397 DPY19L2Q6NUT2 758 aa19.9■□□□□ 0.78
TPM1-219ENST00000559397 MRIQ9BWK5 157 aa19.9■□□□□ 0.78
TPM1-219ENST00000559397 RNF113AO15541 343 aaKnown RBP19.89■□□□□ 0.77
TPM1-219ENST00000559397 ZFYP08048 801 aaPredicted RBP19.89■□□□□ 0.77
TPM1-219ENST00000559397 USP17L8P0C7I0 530 aa19.89■□□□□ 0.77
TPM1-219ENST00000559397 SCNN1DP51172 638 aa19.89■□□□□ 0.77
TPM1-219ENST00000559397 DIXDC1Q155Q3 683 aa19.89■□□□□ 0.77
TPM1-219ENST00000559397 NAA16Q6N069 864 aaPredicted RBP19.89■□□□□ 0.77
TPM1-219ENST00000559397 ZSCAN25Q6NSZ9 544 aa19.89■□□□□ 0.77
TPM1-219ENST00000559397 TMED8Q6PL24 325 aaPredicted RBP19.89■□□□□ 0.77
TPM1-219ENST00000559397 MAST3O60307 1309 aa19.89■□□□□ 0.77
TPM1-219ENST00000559397 ZNF532Q9HCE3 1301 aa19.89■□□□□ 0.77
TPM1-219ENST00000559397 ADAMTSL1Q8N6G6 1762 aa19.89■□□□□ 0.77
TPM1-219ENST00000559397 SHTN1A0MZ66 631 aa19.88■□□□□ 0.77
TPM1-219ENST00000559397 SGSM2O43147 1006 aa19.88■□□□□ 0.77
TPM1-219ENST00000559397 ZNF280AP59817 542 aaPredicted RBP19.88■□□□□ 0.77
TPM1-219ENST00000559397 HDLBPQ00341 1268 aaKnown RBP19.88■□□□□ 0.77
TPM1-219ENST00000559397 UBE3CQ15386 1083 aa19.88■□□□□ 0.77
TPM1-219ENST00000559397 LRRFIP1Q32MZ4 808 aaKnown RBP19.88■□□□□ 0.77
TPM1-219ENST00000559397 ADGRA1Q86SQ6 560 aa19.88■□□□□ 0.77
TPM1-219ENST00000559397 FAM163AQ96GL9 167 aaPredicted RBP19.88■□□□□ 0.77
TPM1-219ENST00000559397 HIP1O00291 1037 aa19.87■□□□□ 0.77
TPM1-219ENST00000559397 GSTO1P78417 241 aa19.87■□□□□ 0.77
TPM1-219ENST00000559397 IL25Q9H293 177 aa19.87■□□□□ 0.77
TPM1-219ENST00000559397 GPRC5DQ9NZD1 345 aa19.87■□□□□ 0.77
TPM1-219ENST00000559397 CNOT7Q9UIV1 285 aaKnown RBP19.87■□□□□ 0.77
TPM1-219ENST00000559397 SERPINA10Q9UK55 444 aa19.87■□□□□ 0.77
TPM1-219ENST00000559397 CYP7A1P22680 504 aa19.87■□□□□ 0.77
TPM1-219ENST00000559397 CRKP46108 304 aa19.87■□□□□ 0.77
TPM1-219ENST00000559397 MMP14P50281 582 aa19.87■□□□□ 0.77
TPM1-219ENST00000559397 HHIPL2Q6UWX4 724 aa19.87■□□□□ 0.77
TPM1-219ENST00000559397 L3MBTL3Q96JM7 780 aaPredicted RBP19.87■□□□□ 0.77
TPM1-219ENST00000559397 HDAC9Q9UKV0 1011 aa19.87■□□□□ 0.77
TPM1-219ENST00000559397 MROH7-TTC4A0A0A0MT08 1334 aa19.86■□□□□ 0.77
TPM1-219ENST00000559397 GAKO14976 1311 aa19.86■□□□□ 0.77
TPM1-219ENST00000559397 BECN1Q14457 450 aa19.86■□□□□ 0.77
TPM1-219ENST00000559397 ZMYM1Q5SVZ6 1142 aa19.86■□□□□ 0.77
TPM1-219ENST00000559397 SLF2Q8IX21 1173 aa19.86■□□□□ 0.77
TPM1-219ENST00000559397 MICALL2Q8IY33 904 aa19.86■□□□□ 0.77
TPM1-219ENST00000559397 OGFOD1Q8N543 542 aa19.86■□□□□ 0.77
TPM1-219ENST00000559397 RUFY2Q8WXA3 655 aa19.85■□□□□ 0.77
TPM1-219ENST00000559397 APPBP2Q92624 585 aa19.85■□□□□ 0.77
TPM1-219ENST00000559397 OSBP2Q969R2 916 aa19.85■□□□□ 0.77
TPM1-219ENST00000559397 TEKT1Q969V4 418 aa19.85■□□□□ 0.77
TPM1-219ENST00000559397 FAM227BQ96M60 508 aa19.85■□□□□ 0.77
TPM1-219ENST00000559397 DIAPH3Q9NSV4 1193 aa19.85■□□□□ 0.77
TPM1-219ENST00000559397 DAGLAQ9Y4D2 1042 aa19.85■□□□□ 0.77
TPM1-219ENST00000559397 PCDHAC2Q9Y5I4 1007 aa19.85■□□□□ 0.77
TPM1-219ENST00000559397 WDR90Q96KV7 1748 aa19.85■□□□□ 0.77
TPM1-219ENST00000559397 LDHCP07864 332 aa19.84■□□□□ 0.77
TPM1-219ENST00000559397 NMIQ13287 307 aaPredicted RBP19.84■□□□□ 0.77
TPM1-219ENST00000559397 CFAP100Q494V2 611 aa19.84■□□□□ 0.77
TPM1-219ENST00000559397 MTMR14Q8NCE2 650 aa19.84■□□□□ 0.77
TPM1-219ENST00000559397 ZDHHC15Q96MV8 337 aa19.84■□□□□ 0.77
TPM1-219ENST00000559397 SEC62Q99442 399 aaKnown RBP19.84■□□□□ 0.77
TPM1-219ENST00000559397 GPR75-ASB3A0A0A6YYF3 556 aa19.84■□□□□ 0.77
TPM1-219ENST00000559397 A0A0D9SFI3 127 aa19.84■□□□□ 0.77
TPM1-219ENST00000559397 APOBEC3HQ6NTF7 200 aaKnown RBP19.84■□□□□ 0.77
TPM1-219ENST00000559397 CWC27Q6UX04 472 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms