RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 TMED8Q6PL24 325 aaPredicted RBP9.77□□□□□ -0.85
SPG11-209ENST00000558253 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.77□□□□□ -0.85
SPG11-209ENST00000558253 BARGINQ6ZT62 677 aa9.77□□□□□ -0.85
SPG11-209ENST00000558253 NCOA7Q8NI08 942 aa9.77□□□□□ -0.85
SPG11-209ENST00000558253 LPIN2Q92539 896 aa9.77□□□□□ -0.85
SPG11-209ENST00000558253 BRF1Q92994 677 aa9.77□□□□□ -0.85
SPG11-209ENST00000558253 FAM89AQ96GI7 184 aa9.77□□□□□ -0.85
SPG11-209ENST00000558253 ZNF594Q96JF6 807 aaPredicted RBP9.77□□□□□ -0.85
SPG11-209ENST00000558253 SPATA32Q96LK8 384 aa9.77□□□□□ -0.85
SPG11-209ENST00000558253 MTA3Q9BTC8 594 aa9.77□□□□□ -0.85
SPG11-209ENST00000558253 PUS3Q9BZE2 481 aaKnown RBP9.77□□□□□ -0.85
SPG11-209ENST00000558253 CNNM1Q9NRU3 951 aa9.77□□□□□ -0.85
SPG11-209ENST00000558253 TRMT112Q9UI30 125 aaKnown RBP9.77□□□□□ -0.85
SPG11-209ENST00000558253 ARIH1Q9Y4X5 557 aaPredicted RBP9.77□□□□□ -0.85
SPG11-209ENST00000558253 ZMYM6O95789 1325 aa9.77□□□□□ -0.85
SPG11-209ENST00000558253 CARMIL3Q8ND23 1372 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 ATRNO75882 1429 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 ZNF213O14771 459 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 CDKL5O76039 1030 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 GNAT2P19087 354 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 MAP3K9P80192 1104 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 TRDNQ13061 729 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 RESTQ13127 1097 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 WASHC4Q2M389 1173 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 CCDC129Q6ZRS4 1044 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 CDC37L1Q7L3B6 337 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 DZIP3Q86Y13 1208 aaKnown RBP9.76□□□□□ -0.85
SPG11-209ENST00000558253 NSUN7Q8NE18 718 aaKnown RBP9.76□□□□□ -0.85
SPG11-209ENST00000558253 SEC62Q99442 399 aaKnown RBP9.76□□□□□ -0.85
SPG11-209ENST00000558253 UTP14AQ9BVJ6 771 aaKnown RBP9.76□□□□□ -0.85
SPG11-209ENST00000558253 NUP62CLQ9H1M0 184 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 GDPD2Q9HCC8 539 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 CCDC87Q9NVE4 849 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 USP25Q9UHP3 1055 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 RCOR1Q9UKL0 485 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 ZNF652Q9Y2D9 606 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 ZKSCAN5Q9Y2L8 839 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 TOGARAM1Q9Y4F4 1720 aa9.76□□□□□ -0.85
SPG11-209ENST00000558253 GOLGA6L6A8MZA4 724 aa9.75□□□□□ -0.85
SPG11-209ENST00000558253 KDM4AO75164 1064 aa9.75□□□□□ -0.85
SPG11-209ENST00000558253 SLC5A1P13866 664 aa9.75□□□□□ -0.85
SPG11-209ENST00000558253 PDIA3P30101 505 aaKnown RBP9.75□□□□□ -0.85
SPG11-209ENST00000558253 ADD2P35612 726 aa9.75□□□□□ -0.85
SPG11-209ENST00000558253 SCRN1Q12765 414 aa9.75□□□□□ -0.85
SPG11-209ENST00000558253 DDB1Q16531 1140 aa9.75□□□□□ -0.85
SPG11-209ENST00000558253 CPLX2Q6PUV4 134 aaKnown RBP9.75□□□□□ -0.85
SPG11-209ENST00000558253 CLEC4GQ6UXB4 293 aa9.75□□□□□ -0.85
SPG11-209ENST00000558253 RBM43Q6ZSC3 357 aaKnown RBP9.75□□□□□ -0.85
SPG11-209ENST00000558253 RALYLQ86SE5 291 aaKnown RBP9.75□□□□□ -0.85
SPG11-209ENST00000558253 TTC6Q86TZ1 520 aa9.75□□□□□ -0.85
SPG11-209ENST00000558253 VGLL2Q8N8G2 317 aa9.75□□□□□ -0.85
SPG11-209ENST00000558253 LEO1Q8WVC0 666 aaPredicted RBP9.75□□□□□ -0.85
SPG11-209ENST00000558253 OSBP2Q969R2 916 aa9.75□□□□□ -0.85
SPG11-209ENST00000558253 CDC5LQ99459 802 aaKnown RBP9.75□□□□□ -0.85
SPG11-209ENST00000558253 FUCA2Q9BTY2 467 aa9.75□□□□□ -0.85
SPG11-209ENST00000558253 SPATA31A1Q5TZJ5 1347 aa9.75□□□□□ -0.85
SPG11-209ENST00000558253 M0R2C6 588 aa9.74□□□□□ -0.85
SPG11-209ENST00000558253 OFD1O75665 1012 aa9.74□□□□□ -0.85
SPG11-209ENST00000558253 FGAP02671 866 aa9.74□□□□□ -0.85
SPG11-209ENST00000558253 PTMAP06454 111 aaKnown RBP9.74□□□□□ -0.85
SPG11-209ENST00000558253 FGFR2P21802 821 aa9.74□□□□□ -0.85
SPG11-209ENST00000558253 MAP3K12Q12852 859 aa9.74□□□□□ -0.85
SPG11-209ENST00000558253 STK3Q13188 491 aa9.74□□□□□ -0.85
SPG11-209ENST00000558253 HLFQ16534 295 aa9.74□□□□□ -0.85
SPG11-209ENST00000558253 FOXD4L6Q3SYB3 417 aaPredicted RBP9.74□□□□□ -0.85
SPG11-209ENST00000558253 CCDC152Q4G0S7 254 aa9.74□□□□□ -0.85
SPG11-209ENST00000558253 FOXD4L3Q6VB84 417 aaPredicted RBP9.74□□□□□ -0.85
SPG11-209ENST00000558253 STOX1Q6ZVD7 989 aa9.74□□□□□ -0.85
SPG11-209ENST00000558253 BRAPQ7Z569 592 aa9.74□□□□□ -0.85
SPG11-209ENST00000558253 TMEM87BQ96K49 555 aa9.74□□□□□ -0.85
SPG11-209ENST00000558253 TNMDQ9H2S6 317 aa9.74□□□□□ -0.85
SPG11-209ENST00000558253 GREM2Q9H772 168 aa9.74□□□□□ -0.85
SPG11-209ENST00000558253 CNNM2Q9H8M5 875 aa9.74□□□□□ -0.85
SPG11-209ENST00000558253 ZNF330Q9Y3S2 320 aaPredicted RBP9.74□□□□□ -0.85
SPG11-209ENST00000558253 TAF6LQ9Y6J9 622 aa9.74□□□□□ -0.85
SPG11-209ENST00000558253 PTPDC1A2A3K4 754 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 GPAA1O43292 621 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 TPM2P07951 284 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 ADORA1P30542 326 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 ZAP70P43403 619 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 NT5C2P49902 561 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 VARS2Q5ST30 1063 aaKnown RBP9.73□□□□□ -0.85
SPG11-209ENST00000558253 MB21D2Q8IYB1 491 aaPredicted RBP9.73□□□□□ -0.85
SPG11-209ENST00000558253 TMTC2Q8N394 836 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 FAM200AQ8TCP9 573 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 CHAMP1Q96JM3 812 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 TCEANC2Q96MN5 208 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 MPHOSPH8Q99549 860 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 CLSTN2Q9H4D0 955 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 ZBTB1Q9Y2K1 713 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 NDUFB9Q9Y6M9 179 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 CICQ96RK0 1608 aaPredicted RBP9.73□□□□□ -0.85
SPG11-209ENST00000558253 SALL1Q9NSC2 1324 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 RIC1Q4ADV7 1423 aa9.73□□□□□ -0.85
SPG11-209ENST00000558253 A0A1W2PQ27 194 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 A0A1W2PQ64 194 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 A0A1W2PQD8 194 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 PATL2C9JE40 543 aaKnown RBP9.72□□□□□ -0.85
SPG11-209ENST00000558253 CPLX1O14810 134 aa9.72□□□□□ -0.85
SPG11-209ENST00000558253 PRC1O43663 620 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms