RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 GOLGA6L1Q8N7Z2 621 aa7.82□□□□□ -1.16
FOXN3-218ENST00000557718 EDARADDQ8WWZ3 215 aa7.82□□□□□ -1.16
FOXN3-218ENST00000557718 NIFKQ9BYG3 293 aaKnown RBP7.82□□□□□ -1.16
FOXN3-218ENST00000557718 BTAF1O14981 1849 aa7.82□□□□□ -1.16
FOXN3-218ENST00000557718 LAMB4A4D0S4 1761 aa7.82□□□□□ -1.16
FOXN3-218ENST00000557718 MAPK8IP3Q9UPT6 1336 aa7.81□□□□□ -1.16
FOXN3-218ENST00000557718 ATP4AP20648 1035 aa7.81□□□□□ -1.16
FOXN3-218ENST00000557718 MCM6Q14566 821 aa7.81□□□□□ -1.16
FOXN3-218ENST00000557718 VPS72Q15906 364 aa7.81□□□□□ -1.16
FOXN3-218ENST00000557718 CCDC27Q2M243 656 aa7.81□□□□□ -1.16
FOXN3-218ENST00000557718 WWC1Q8IX03 1113 aa7.81□□□□□ -1.16
FOXN3-218ENST00000557718 C1orf216Q8TAB5 229 aa7.81□□□□□ -1.16
FOXN3-218ENST00000557718 NGLY1Q96IV0 654 aa7.81□□□□□ -1.16
FOXN3-218ENST00000557718 SPOCK3Q9BQ16 436 aa7.81□□□□□ -1.16
FOXN3-218ENST00000557718 THUMPD2Q9BTF0 503 aaKnown RBP7.81□□□□□ -1.16
FOXN3-218ENST00000557718 ZCCHC2Q9C0B9 1178 aaKnown RBP7.81□□□□□ -1.16
FOXN3-218ENST00000557718 DNAAF2Q9NVR5 837 aaKnown RBP7.81□□□□□ -1.16
FOXN3-218ENST00000557718 NHSQ6T4R5 1651 aa7.81□□□□□ -1.16
FOXN3-218ENST00000557718 MAP3K5Q99683 1374 aa7.81□□□□□ -1.16
FOXN3-218ENST00000557718 TMEM229AB2RXF0 380 aa7.8□□□□□ -1.16
FOXN3-218ENST00000557718 CYP27B1O15528 508 aa7.8□□□□□ -1.16
FOXN3-218ENST00000557718 RIPK4P57078 832 aa7.8□□□□□ -1.16
FOXN3-218ENST00000557718 EVA1CP58658 441 aa7.8□□□□□ -1.16
FOXN3-218ENST00000557718 DCTN1Q14203 1278 aa7.8□□□□□ -1.16
FOXN3-218ENST00000557718 FIGNL1Q6PIW4 674 aa7.8□□□□□ -1.16
FOXN3-218ENST00000557718 AIDAQ96BJ3 306 aa7.8□□□□□ -1.16
FOXN3-218ENST00000557718 USP35Q9P2H5 1018 aa7.8□□□□□ -1.16
FOXN3-218ENST00000557718 SERTAD1Q9UHV2 236 aa7.8□□□□□ -1.16
FOXN3-218ENST00000557718 GGA1Q9UJY5 639 aa7.8□□□□□ -1.16
FOXN3-218ENST00000557718 USP21Q9UK80 565 aa7.8□□□□□ -1.16
FOXN3-218ENST00000557718 MKL2Q9ULH7 1088 aa7.8□□□□□ -1.16
FOXN3-218ENST00000557718 PCDHGC4Q9Y5F7 938 aa7.8□□□□□ -1.16
FOXN3-218ENST00000557718 CEMIPQ8WUJ3 1361 aa7.8□□□□□ -1.16
FOXN3-218ENST00000557718 LY75O60449 1722 aa7.79□□□□□ -1.16
FOXN3-218ENST00000557718 TJP1Q07157 1748 aa7.79□□□□□ -1.16
FOXN3-218ENST00000557718 PIK3CDO00329 1044 aa7.79□□□□□ -1.16
FOXN3-218ENST00000557718 IL2RBP14784 551 aa7.79□□□□□ -1.16
FOXN3-218ENST00000557718 TATP17735 454 aaPredicted RBP7.79□□□□□ -1.16
FOXN3-218ENST00000557718 SLCO4C1Q6ZQN7 724 aa7.79□□□□□ -1.16
FOXN3-218ENST00000557718 NLRP8Q86W28 1048 aa7.79□□□□□ -1.16
FOXN3-218ENST00000557718 TRMT2AQ8IZ69 625 aaKnown RBP7.79□□□□□ -1.16
FOXN3-218ENST00000557718 ZNF295-AS1Q8N0V1 137 aa7.79□□□□□ -1.16
FOXN3-218ENST00000557718 IL17REQ8NFR9 667 aa7.79□□□□□ -1.16
FOXN3-218ENST00000557718 SLC4A9Q96Q91 983 aa7.79□□□□□ -1.16
FOXN3-218ENST00000557718 PNNQ9H307 717 aaKnown RBP7.79□□□□□ -1.16
FOXN3-218ENST00000557718 RRAGCQ9HB90 399 aa7.79□□□□□ -1.16
FOXN3-218ENST00000557718 IQSEC3Q9UPP2 1182 aaPredicted RBP7.79□□□□□ -1.16
FOXN3-218ENST00000557718 TAF1LQ8IZX4 1826 aa7.79□□□□□ -1.16
FOXN3-218ENST00000557718 TNS1Q9HBL0 1735 aaKnown RBP7.78□□□□□ -1.16
FOXN3-218ENST00000557718 A6NJY4 79 aa7.78□□□□□ -1.16
FOXN3-218ENST00000557718 PROCP04070 461 aa7.78□□□□□ -1.16
FOXN3-218ENST00000557718 PHKG2P15735 406 aa7.78□□□□□ -1.16
FOXN3-218ENST00000557718 HOXB4P17483 251 aaPredicted RBP7.78□□□□□ -1.16
FOXN3-218ENST00000557718 SLFN5Q08AF3 891 aa7.78□□□□□ -1.16
FOXN3-218ENST00000557718 MTFR1Q15390 333 aa7.78□□□□□ -1.16
FOXN3-218ENST00000557718 PLEKHO1Q53GL0 409 aaPredicted RBP7.78□□□□□ -1.16
FOXN3-218ENST00000557718 MEX3CQ5U5Q3 659 aaKnown RBP7.78□□□□□ -1.16
FOXN3-218ENST00000557718 ZNF530Q6P9A1 599 aaPredicted RBP7.78□□□□□ -1.16
FOXN3-218ENST00000557718 MCM10Q7L590 875 aa7.78□□□□□ -1.16
FOXN3-218ENST00000557718 NGEFQ8N5V2 710 aa7.78□□□□□ -1.16
FOXN3-218ENST00000557718 GAS2L2Q8NHY3 880 aa7.78□□□□□ -1.16
FOXN3-218ENST00000557718 RAPGEF4Q8WZA2 1011 aa7.78□□□□□ -1.16
FOXN3-218ENST00000557718 RGS17Q9UGC6 210 aaPredicted RBP7.78□□□□□ -1.16
FOXN3-218ENST00000557718 PCDHGA11Q9Y5H2 935 aa7.78□□□□□ -1.16
FOXN3-218ENST00000557718 N4BP2Q86UW6 1770 aaPredicted RBP7.78□□□□□ -1.16
FOXN3-218ENST00000557718 COL5A3P25940 1745 aaPredicted RBP7.78□□□□□ -1.16
FOXN3-218ENST00000557718 CICQ96RK0 1608 aaPredicted RBP7.78□□□□□ -1.16
FOXN3-218ENST00000557718 CDK2AP1O14519 115 aa7.77□□□□□ -1.17
FOXN3-218ENST00000557718 ZNF853P0CG23 659 aa7.77□□□□□ -1.17
FOXN3-218ENST00000557718 AMOTQ4VCS5 1084 aa7.77□□□□□ -1.17
FOXN3-218ENST00000557718 AKAP4Q5JQC9 854 aa7.77□□□□□ -1.17
FOXN3-218ENST00000557718 DUSP27Q5VZP5 1158 aa7.77□□□□□ -1.17
FOXN3-218ENST00000557718 LGR6Q9HBX8 967 aa7.77□□□□□ -1.17
FOXN3-218ENST00000557718 COG6Q9Y2V7 657 aa7.77□□□□□ -1.17
FOXN3-218ENST00000557718 THRAP3Q9Y2W1 955 aaKnown RBP7.77□□□□□ -1.17
FOXN3-218ENST00000557718 USP3Q9Y6I4 520 aa7.77□□□□□ -1.17
FOXN3-218ENST00000557718 MYH14Q7Z406 1995 aaKnown RBP7.77□□□□□ -1.17
FOXN3-218ENST00000557718 EP400Q96L91 3159 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 A0A1W2PNR3 127 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 GNAT3A8MTJ3 354 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 ATXN7O15265 892 aaPredicted RBP7.76□□□□□ -1.17
FOXN3-218ENST00000557718 ARAFP10398 606 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 EPXP11678 715 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 AMPD1P23109 780 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 COL8A1P27658 744 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 ARSJQ5FYB0 599 aaPredicted RBP7.76□□□□□ -1.17
FOXN3-218ENST00000557718 MPRIPQ6WCQ1 1025 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 LINC00114Q6XXX2 140 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 WDR63Q8IWG1 891 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 ZCRB1Q8TBF4 217 aaKnown RBP7.76□□□□□ -1.17
FOXN3-218ENST00000557718 HCN2Q9UL51 889 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 KCPQ6ZWJ8 1503 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 ZNF831Q5JPB2 1677 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 IL16Q14005 1332 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 PCDH11XQ9BZA7 1347 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 PCDH11YQ9BZA8 1340 aa7.76□□□□□ -1.17
FOXN3-218ENST00000557718 KRBA1A5PL33 1030 aa7.75□□□□□ -1.17
FOXN3-218ENST00000557718 NEURL1BA8MQ27 555 aa7.75□□□□□ -1.17
FOXN3-218ENST00000557718 RNMTO43148 476 aaKnown RBP7.75□□□□□ -1.17
FOXN3-218ENST00000557718 HTATSF1O43719 755 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms