RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 LRRC27Q9C0I9 530 aa19.85■□□□□ 0.77
PTPN21-208ENST00000556564 RNF17Q9BXT8 1623 aaKnown RBP19.85■□□□□ 0.77
PTPN21-208ENST00000556564 ATP2B4P23634 1241 aa19.85■□□□□ 0.77
PTPN21-208ENST00000556564 BCAMP50895 628 aa19.85■□□□□ 0.77
PTPN21-208ENST00000556564 CCDC102BQ68D86 513 aa19.85■□□□□ 0.77
PTPN21-208ENST00000556564 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.85■□□□□ 0.77
PTPN21-208ENST00000556564 ERFEQ4G0M1 354 aa19.85■□□□□ 0.77
PTPN21-208ENST00000556564 DPY19L2Q6NUT2 758 aa19.85■□□□□ 0.77
PTPN21-208ENST00000556564 PIGBQ92521 554 aa19.85■□□□□ 0.77
PTPN21-208ENST00000556564 GREM2Q9H772 168 aa19.85■□□□□ 0.77
PTPN21-208ENST00000556564 CNPY2Q9Y2B0 182 aa19.85■□□□□ 0.77
PTPN21-208ENST00000556564 CHRNDQ07001 517 aa19.84■□□□□ 0.77
PTPN21-208ENST00000556564 DRC1Q96MC2 740 aa19.84■□□□□ 0.77
PTPN21-208ENST00000556564 NUP88Q99567 741 aaPredicted RBP19.84■□□□□ 0.77
PTPN21-208ENST00000556564 GLI2P10070 1586 aa19.84■□□□□ 0.77
PTPN21-208ENST00000556564 TCP10L2B9ZVM9 353 aa19.84■□□□□ 0.77
PTPN21-208ENST00000556564 PCCAP05165 728 aaPredicted RBP19.84■□□□□ 0.77
PTPN21-208ENST00000556564 SYKP43405 635 aa19.84■□□□□ 0.77
PTPN21-208ENST00000556564 DDX19AQ9NUU7 478 aaKnown RBP19.84■□□□□ 0.77
PTPN21-208ENST00000556564 CALML3P27482 149 aa19.84■□□□□ 0.77
PTPN21-208ENST00000556564 LRRC24Q50LG9 513 aa19.84■□□□□ 0.77
PTPN21-208ENST00000556564 CNKSR1Q969H4 720 aa19.84■□□□□ 0.77
PTPN21-208ENST00000556564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.83■□□□□ 0.77
PTPN21-208ENST00000556564 PTPDC1A2A3K4 754 aa19.83■□□□□ 0.77
PTPN21-208ENST00000556564 TBC1D22AQ8WUA7 517 aa19.83■□□□□ 0.77
PTPN21-208ENST00000556564 PUF60Q9UHX1 559 aaKnown RBP19.83■□□□□ 0.77
PTPN21-208ENST00000556564 SPA17Q15506 151 aa19.83■□□□□ 0.77
PTPN21-208ENST00000556564 KIAA0825Q8IV33 1275 aa19.83■□□□□ 0.77
PTPN21-208ENST00000556564 SRP68Q9UHB9 627 aaKnown RBP19.83■□□□□ 0.77
PTPN21-208ENST00000556564 KANK3Q6NY19 840 aa19.83■□□□□ 0.76
PTPN21-208ENST00000556564 RBM27Q9P2N5 1060 aaKnown RBP19.83■□□□□ 0.76
PTPN21-208ENST00000556564 CAMSAP1Q5T5Y3 1602 aa19.83■□□□□ 0.76
PTPN21-208ENST00000556564 SLC27A2O14975 620 aa19.83■□□□□ 0.76
PTPN21-208ENST00000556564 IL6STP40189 918 aaPredicted RBP19.83■□□□□ 0.76
PTPN21-208ENST00000556564 TEKT1Q969V4 418 aa19.83■□□□□ 0.76
PTPN21-208ENST00000556564 FCHSD1Q86WN1 690 aa19.82■□□□□ 0.76
PTPN21-208ENST00000556564 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.82■□□□□ 0.76
PTPN21-208ENST00000556564 CROCC2H7BZ55 1655 aa19.82■□□□□ 0.76
PTPN21-208ENST00000556564 HOOK2Q96ED9 719 aa19.82■□□□□ 0.76
PTPN21-208ENST00000556564 TOP1P11387 765 aaKnown RBP19.82■□□□□ 0.76
PTPN21-208ENST00000556564 GNA11P29992 359 aa19.82■□□□□ 0.76
PTPN21-208ENST00000556564 CETN1Q12798 172 aa19.82■□□□□ 0.76
PTPN21-208ENST00000556564 HSP90B2PQ58FF3 399 aa19.82■□□□□ 0.76
PTPN21-208ENST00000556564 TDRD12Q587J7 1177 aaKnown RBP19.82■□□□□ 0.76
PTPN21-208ENST00000556564 CERKQ8TCT0 537 aa19.82■□□□□ 0.76
PTPN21-208ENST00000556564 TAF4BQ92750 862 aa19.82■□□□□ 0.76
PTPN21-208ENST00000556564 ERLIN2O94905 339 aa19.81■□□□□ 0.76
PTPN21-208ENST00000556564 BEND3Q5T5X7 828 aa19.81■□□□□ 0.76
PTPN21-208ENST00000556564 RRAGBQ5VZM2 374 aa19.81■□□□□ 0.76
PTPN21-208ENST00000556564 BMP15O95972 392 aa19.81■□□□□ 0.76
PTPN21-208ENST00000556564 STX1AQ16623 288 aa19.81■□□□□ 0.76
PTPN21-208ENST00000556564 KBTBD3Q8NAB2 608 aa19.81■□□□□ 0.76
PTPN21-208ENST00000556564 FERMT2Q96AC1 680 aa19.81■□□□□ 0.76
PTPN21-208ENST00000556564 PLIN2Q99541 437 aa19.81■□□□□ 0.76
PTPN21-208ENST00000556564 PALLDQ8WX93 1383 aa19.81■□□□□ 0.76
PTPN21-208ENST00000556564 EDC3Q96F86 508 aaKnown RBP19.81■□□□□ 0.76
PTPN21-208ENST00000556564 BACH1O14867 736 aa19.8■□□□□ 0.76
PTPN21-208ENST00000556564 CCDC174Q6PII3 467 aa19.8■□□□□ 0.76
PTPN21-208ENST00000556564 HOMER2Q9NSB8 354 aa19.8■□□□□ 0.76
PTPN21-208ENST00000556564 TRIM75PA6NK02 468 aa19.8■□□□□ 0.76
PTPN21-208ENST00000556564 ARHGAP29Q52LW3 1261 aa19.8■□□□□ 0.76
PTPN21-208ENST00000556564 GOPCQ9HD26 462 aa19.8■□□□□ 0.76
PTPN21-208ENST00000556564 DHX58Q96C10 678 aa19.8■□□□□ 0.76
PTPN21-208ENST00000556564 TRIM47Q96LD4 638 aa19.8■□□□□ 0.76
PTPN21-208ENST00000556564 FAM47AQ5JRC9 791 aa19.8■□□□□ 0.76
PTPN21-208ENST00000556564 USP44Q9H0E7 712 aa19.8■□□□□ 0.76
PTPN21-208ENST00000556564 UNC13BO14795 1591 aa19.8■□□□□ 0.76
PTPN21-208ENST00000556564 TNNT3P45378 269 aaPredicted RBP19.8■□□□□ 0.76
PTPN21-208ENST00000556564 USH1GQ495M9 461 aa19.8■□□□□ 0.76
PTPN21-208ENST00000556564 JAKMIP3Q5VZ66 844 aa19.8■□□□□ 0.76
PTPN21-208ENST00000556564 ZNF526Q8TF50 670 aaPredicted RBP19.8■□□□□ 0.76
PTPN21-208ENST00000556564 TNS3Q68CZ2 1445 aa19.79■□□□□ 0.76
PTPN21-208ENST00000556564 VPS36Q86VN1 386 aa19.79■□□□□ 0.76
PTPN21-208ENST00000556564 KCNG4Q8TDN1 519 aa19.79■□□□□ 0.76
PTPN21-208ENST00000556564 BEGAINQ9BUH8 593 aa19.79■□□□□ 0.76
PTPN21-208ENST00000556564 ERBB4Q15303 1308 aa19.79■□□□□ 0.76
PTPN21-208ENST00000556564 RPS6KB1P23443 525 aa19.79■□□□□ 0.76
PTPN21-208ENST00000556564 CERS3Q8IU89 383 aa19.79■□□□□ 0.76
PTPN21-208ENST00000556564 ASIC1P78348 528 aa19.79■□□□□ 0.76
PTPN21-208ENST00000556564 CPXCR1Q8N123 301 aa19.79■□□□□ 0.76
PTPN21-208ENST00000556564 TNNT1P13805 278 aa19.78■□□□□ 0.76
PTPN21-208ENST00000556564 USP26Q9BXU7 913 aa19.78■□□□□ 0.76
PTPN21-208ENST00000556564 ERCC4Q92889 916 aaPredicted RBP19.78■□□□□ 0.76
PTPN21-208ENST00000556564 UBE2HP62256 183 aa19.78■□□□□ 0.76
PTPN21-208ENST00000556564 TEX35Q5T0J7 233 aa19.78■□□□□ 0.76
PTPN21-208ENST00000556564 FAM212AQ96EL1 285 aa19.78■□□□□ 0.76
PTPN21-208ENST00000556564 RMND1Q9NWS8 449 aa19.78■□□□□ 0.76
PTPN21-208ENST00000556564 C8orf34Q49A92 452 aa19.78■□□□□ 0.76
PTPN21-208ENST00000556564 FAM114A1Q8IWE2 563 aa19.78■□□□□ 0.76
PTPN21-208ENST00000556564 MYCLP12524 364 aaPredicted RBP19.78■□□□□ 0.76
PTPN21-208ENST00000556564 DNA2P51530 1060 aa19.78■□□□□ 0.76
PTPN21-208ENST00000556564 LETM2Q2VYF4 491 aa19.78■□□□□ 0.76
PTPN21-208ENST00000556564 MYL10Q9BUA6 226 aa19.78■□□□□ 0.76
PTPN21-208ENST00000556564 CHMP2AO43633 222 aa19.77■□□□□ 0.76
PTPN21-208ENST00000556564 DNM1Q05193 864 aaKnown RBP19.77■□□□□ 0.76
PTPN21-208ENST00000556564 KRT79Q5XKE5 535 aa19.77■□□□□ 0.76
PTPN21-208ENST00000556564 IVNS1ABPQ9Y6Y0 642 aa19.77■□□□□ 0.76
PTPN21-208ENST00000556564 ZNF804BA4D1E1 1349 aa19.77■□□□□ 0.76
PTPN21-208ENST00000556564 DCPSQ96C86 337 aaKnown RBP19.77■□□□□ 0.76
PTPN21-208ENST00000556564 AXIN2Q9Y2T1 843 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms