RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 CFAP100Q494V2 611 aa19.82■□□□□ 0.76
CHMP1A-209ENST00000550872 B4GALNT3Q6L9W6 998 aa19.82■□□□□ 0.76
CHMP1A-209ENST00000550872 TBC1D9Q6ZT07 1266 aa19.82■□□□□ 0.76
CHMP1A-209ENST00000550872 ZC3H15Q8WU90 426 aaKnown RBP19.82■□□□□ 0.76
CHMP1A-209ENST00000550872 MAP1SQ66K74 1059 aaPredicted RBP19.81■□□□□ 0.76
CHMP1A-209ENST00000550872 ERICH6Q7L0X2 663 aa19.81■□□□□ 0.76
CHMP1A-209ENST00000550872 SERPINA10Q9UK55 444 aa19.81■□□□□ 0.76
CHMP1A-209ENST00000550872 WNT10BO00744 389 aa19.8■□□□□ 0.76
CHMP1A-209ENST00000550872 CRKP46108 304 aa19.8■□□□□ 0.76
CHMP1A-209ENST00000550872 HDLBPQ00341 1268 aaKnown RBP19.8■□□□□ 0.76
CHMP1A-209ENST00000550872 NBPF9Q3BBW0 867 aa19.8■□□□□ 0.76
CHMP1A-209ENST00000550872 MTMR14Q8NCE2 650 aa19.8■□□□□ 0.76
CHMP1A-209ENST00000550872 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.8■□□□□ 0.76
CHMP1A-209ENST00000550872 KLRG1Q96E93 195 aa19.8■□□□□ 0.76
CHMP1A-209ENST00000550872 MRIQ9BWK5 157 aa19.8■□□□□ 0.76
CHMP1A-209ENST00000550872 LRP2BPQ9P2M1 347 aa19.8■□□□□ 0.76
CHMP1A-209ENST00000550872 PGAP2Q9UHJ9 254 aa19.8■□□□□ 0.76
CHMP1A-209ENST00000550872 AKAP11Q9UKA4 1901 aa19.8■□□□□ 0.76
CHMP1A-209ENST00000550872 CYP2E1P05181 493 aaPredicted RBP19.79■□□□□ 0.76
CHMP1A-209ENST00000550872 ATP5JP18859 108 aa19.79■□□□□ 0.76
CHMP1A-209ENST00000550872 CNTROBQ8N137 903 aa19.79■□□□□ 0.76
CHMP1A-209ENST00000550872 JMYQ8N9B5 988 aa19.79■□□□□ 0.76
CHMP1A-209ENST00000550872 TEKT1Q969V4 418 aa19.79■□□□□ 0.76
CHMP1A-209ENST00000550872 DCPSQ96C86 337 aaKnown RBP19.79■□□□□ 0.76
CHMP1A-209ENST00000550872 GPATCH3Q96I76 525 aa19.79■□□□□ 0.76
CHMP1A-209ENST00000550872 ZBED3Q96IU2 234 aaPredicted RBP19.79■□□□□ 0.76
CHMP1A-209ENST00000550872 BOLA2Q9H3K6 86 aa19.79■□□□□ 0.76
CHMP1A-209ENST00000550872 ECHDC1Q9NTX5 307 aa19.79■□□□□ 0.76
CHMP1A-209ENST00000550872 RAI14Q9P0K7 980 aa19.79■□□□□ 0.76
CHMP1A-209ENST00000550872 PCDHAC2Q9Y5I4 1007 aa19.79■□□□□ 0.76
CHMP1A-209ENST00000550872 NDUFB9Q9Y6M9 179 aa19.79■□□□□ 0.76
CHMP1A-209ENST00000550872 ASTN2O75129 1339 aaPredicted RBP19.78■□□□□ 0.76
CHMP1A-209ENST00000550872 ANGEL2Q5VTE6 544 aaKnown RBP19.78■□□□□ 0.76
CHMP1A-209ENST00000550872 DZIP1Q86YF9 867 aaKnown RBP19.78■□□□□ 0.76
CHMP1A-209ENST00000550872 OTUD7AQ8TE49 926 aaPredicted RBP19.78■□□□□ 0.76
CHMP1A-209ENST00000550872 PRMT6Q96LA8 375 aaPredicted RBP19.78■□□□□ 0.76
CHMP1A-209ENST00000550872 DNAJC2Q99543 621 aaKnown RBP19.78■□□□□ 0.76
CHMP1A-209ENST00000550872 LNPKQ9C0E8 428 aa19.78■□□□□ 0.76
CHMP1A-209ENST00000550872 GGA3Q9NZ52 723 aa19.78■□□□□ 0.76
CHMP1A-209ENST00000550872 ADAMTSL1Q8N6G6 1762 aa19.78■□□□□ 0.76
CHMP1A-209ENST00000550872 SPDYE2BA6NHP3 402 aa19.77■□□□□ 0.76
CHMP1A-209ENST00000550872 SPDYE6P0CI01 402 aa19.77■□□□□ 0.76
CHMP1A-209ENST00000550872 DIXDC1Q155Q3 683 aa19.77■□□□□ 0.76
CHMP1A-209ENST00000550872 HHIPL2Q6UWX4 724 aa19.77■□□□□ 0.76
CHMP1A-209ENST00000550872 CHD1LQ86WJ1 897 aa19.77■□□□□ 0.76
CHMP1A-209ENST00000550872 PIH1D3Q9NQM4 214 aaKnown RBP19.77■□□□□ 0.76
CHMP1A-209ENST00000550872 PCNTO95613 3336 aa19.77■□□□□ 0.75
CHMP1A-209ENST00000550872 POLR2AP24928 1970 aaKnown RBP19.76■□□□□ 0.75
CHMP1A-209ENST00000550872 MYO1BO43795 1136 aa19.76■□□□□ 0.75
CHMP1A-209ENST00000550872 NUCB1Q02818 461 aa19.76■□□□□ 0.75
CHMP1A-209ENST00000550872 MECOMQ03112 1051 aa19.76■□□□□ 0.75
CHMP1A-209ENST00000550872 SLF2Q8IX21 1173 aa19.76■□□□□ 0.75
CHMP1A-209ENST00000550872 ANTXR1Q9H6X2 564 aa19.76■□□□□ 0.75
CHMP1A-209ENST00000550872 GOLIM4O00461 696 aa19.75■□□□□ 0.75
CHMP1A-209ENST00000550872 MX1P20591 662 aa19.75■□□□□ 0.75
CHMP1A-209ENST00000550872 TTF1Q15361 905 aaPredicted RBP19.75■□□□□ 0.75
CHMP1A-209ENST00000550872 TSHZ3Q63HK5 1081 aa19.75■□□□□ 0.75
CHMP1A-209ENST00000550872 CDC37L1Q7L3B6 337 aa19.75■□□□□ 0.75
CHMP1A-209ENST00000550872 KRT26Q7Z3Y9 468 aa19.75■□□□□ 0.75
CHMP1A-209ENST00000550872 USP48Q86UV5 1035 aa19.75■□□□□ 0.75
CHMP1A-209ENST00000550872 ZDHHC15Q96MV8 337 aa19.75■□□□□ 0.75
CHMP1A-209ENST00000550872 GLIS2Q9BZE0 524 aaPredicted RBP19.75■□□□□ 0.75
CHMP1A-209ENST00000550872 DAGLAQ9Y4D2 1042 aa19.75■□□□□ 0.75
CHMP1A-209ENST00000550872 TTC41PQ6P2S7 1318 aa19.75■□□□□ 0.75
CHMP1A-209ENST00000550872 CLRN2A0PK11 232 aa19.74■□□□□ 0.75
CHMP1A-209ENST00000550872 ERC2O15083 957 aa19.74■□□□□ 0.75
CHMP1A-209ENST00000550872 IDH1O75874 414 aaKnown RBP19.74■□□□□ 0.75
CHMP1A-209ENST00000550872 ITGBL1O95965 494 aaPredicted RBP19.74■□□□□ 0.75
CHMP1A-209ENST00000550872 LDHCP07864 332 aa19.74■□□□□ 0.75
CHMP1A-209ENST00000550872 GSTO1P78417 241 aa19.74■□□□□ 0.75
CHMP1A-209ENST00000550872 SULF1Q8IWU6 871 aa19.74■□□□□ 0.75
CHMP1A-209ENST00000550872 NSUN4Q96CB9 384 aaKnown RBP19.74■□□□□ 0.75
CHMP1A-209ENST00000550872 HAUS7Q99871 368 aa19.74■□□□□ 0.75
CHMP1A-209ENST00000550872 TDRD3Q9H7E2 651 aaKnown RBP19.74■□□□□ 0.75
CHMP1A-209ENST00000550872 APOBEC3HQ6NTF7 200 aaKnown RBP19.73■□□□□ 0.75
CHMP1A-209ENST00000550872 EDC3Q96F86 508 aaKnown RBP19.73■□□□□ 0.75
CHMP1A-209ENST00000550872 VEZTQ9HBM0 779 aa19.73■□□□□ 0.75
CHMP1A-209ENST00000550872 PAG1Q9NWQ8 432 aa19.73■□□□□ 0.75
CHMP1A-209ENST00000550872 ZNF70Q9UC06 446 aaPredicted RBP19.73■□□□□ 0.75
CHMP1A-209ENST00000550872 AOX1Q06278 1338 aa19.73■□□□□ 0.75
CHMP1A-209ENST00000550872 PITPNM2Q9BZ72 1349 aa19.73■□□□□ 0.75
CHMP1A-209ENST00000550872 IGSF3O75054 1194 aa19.72■□□□□ 0.75
CHMP1A-209ENST00000550872 HTRA3P83110 453 aa19.72■□□□□ 0.75
CHMP1A-209ENST00000550872 MAP3K12Q12852 859 aa19.72■□□□□ 0.75
CHMP1A-209ENST00000550872 NAA16Q6N069 864 aaPredicted RBP19.72■□□□□ 0.75
CHMP1A-209ENST00000550872 ZNF384Q8TF68 577 aa19.72■□□□□ 0.75
CHMP1A-209ENST00000550872 FAM163AQ96GL9 167 aaPredicted RBP19.72■□□□□ 0.75
CHMP1A-209ENST00000550872 SCAF8Q9UPN6 1271 aaKnown RBP19.72■□□□□ 0.75
CHMP1A-209ENST00000550872 SALL3Q9BXA9 1300 aa19.72■□□□□ 0.75
CHMP1A-209ENST00000550872 MYH2Q9UKX2 1941 aa19.71■□□□□ 0.75
CHMP1A-209ENST00000550872 ADM5C9JUS6 153 aa19.71■□□□□ 0.75
CHMP1A-209ENST00000550872 TRAF5O00463 557 aa19.71■□□□□ 0.75
CHMP1A-209ENST00000550872 GLRX3O76003 335 aaKnown RBP19.71■□□□□ 0.75
CHMP1A-209ENST00000550872 PDE1AP54750 535 aa19.71■□□□□ 0.75
CHMP1A-209ENST00000550872 SPDYE2Q495Y8 402 aa19.71■□□□□ 0.75
CHMP1A-209ENST00000550872 APOBEC3FQ8IUX4 373 aaKnown RBP19.71■□□□□ 0.75
CHMP1A-209ENST00000550872 CCDC136Q96JN2 1154 aa19.71■□□□□ 0.75
CHMP1A-209ENST00000550872 STAP2Q9UGK3 403 aa19.71■□□□□ 0.75
CHMP1A-209ENST00000550872 MROH7-TTC4A0A0A0MT08 1334 aa19.71■□□□□ 0.75
CHMP1A-209ENST00000550872 GAKO14976 1311 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms