RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 KLRG1Q96E93 195 aa31.86■■■□□ 2.69
CPSF6-205ENST00000550075 DBNDD2Q9BQY9 259 aa31.86■■■□□ 2.69
CPSF6-205ENST00000550075 RHPN1Q8TCX5 695 aa31.85■■■□□ 2.69
CPSF6-205ENST00000550075 CDCA5Q96FF9 252 aa31.85■■■□□ 2.69
CPSF6-205ENST00000550075 MRIQ9BWK5 157 aa31.85■■■□□ 2.69
CPSF6-205ENST00000550075 CST9Q5W186 159 aa31.84■■■□□ 2.69
CPSF6-205ENST00000550075 SPTY2D1Q68D10 685 aaPredicted RBP31.84■■■□□ 2.69
CPSF6-205ENST00000550075 DNAJC5GQ8N7S2 189 aa31.84■■■□□ 2.69
CPSF6-205ENST00000550075 PRMT6Q96LA8 375 aaPredicted RBP31.84■■■□□ 2.69
CPSF6-205ENST00000550075 CRBNQ96SW2 442 aa31.84■■■□□ 2.69
CPSF6-205ENST00000550075 CNTNAP1P78357 1384 aa31.83■■■□□ 2.69
CPSF6-205ENST00000550075 AACSQ86V21 672 aa31.83■■■□□ 2.69
CPSF6-205ENST00000550075 CLASRPQ8N2M8 674 aaKnown RBP31.83■■■□□ 2.69
CPSF6-205ENST00000550075 SPATA5Q8NB90 893 aa31.83■■■□□ 2.69
CPSF6-205ENST00000550075 PCDHAC2Q9Y5I4 1007 aa31.83■■■□□ 2.69
CPSF6-205ENST00000550075 APBB1O00213 710 aa31.82■■■□□ 2.68
CPSF6-205ENST00000550075 PRDX5P30044 214 aa31.82■■■□□ 2.68
CPSF6-205ENST00000550075 HHIPL2Q6UWX4 724 aa31.82■■■□□ 2.68
CPSF6-205ENST00000550075 EAF2Q96CJ1 260 aaPredicted RBP31.82■■■□□ 2.68
CPSF6-205ENST00000550075 VEZTQ9HBM0 779 aa31.82■■■□□ 2.68
CPSF6-205ENST00000550075 HMG20BQ9P0W2 317 aa31.82■■■□□ 2.68
CPSF6-205ENST00000550075 DBNLQ9UJU6 430 aaKnown RBP31.82■■■□□ 2.68
CPSF6-205ENST00000550075 CLRN2A0PK11 232 aa31.81■■■□□ 2.68
CPSF6-205ENST00000550075 TNFAIP1Q13829 316 aa31.81■■■□□ 2.68
CPSF6-205ENST00000550075 ZDHHC15Q96MV8 337 aa31.81■■■□□ 2.68
CPSF6-205ENST00000550075 CCDC8Q9H0W5 538 aaPredicted RBP31.81■■■□□ 2.68
CPSF6-205ENST00000550075 IL1RAPL2Q9NP60 686 aa31.81■■■□□ 2.68
CPSF6-205ENST00000550075 ABCF2Q9UG63 623 aa31.81■■■□□ 2.68
CPSF6-205ENST00000550075 MKRN1Q9UHC7 482 aaKnown RBP31.81■■■□□ 2.68
CPSF6-205ENST00000550075 PPP2R3BQ9Y5P8 575 aa31.81■■■□□ 2.68
CPSF6-205ENST00000550075 TLL2Q9Y6L7 1015 aa31.81■■■□□ 2.68
CPSF6-205ENST00000550075 RASSF10A6NK89 507 aa31.8■■■□□ 2.68
CPSF6-205ENST00000550075 NF2P35240 595 aa31.8■■■□□ 2.68
CPSF6-205ENST00000550075 SPDYE2Q495Y8 402 aa31.8■■■□□ 2.68
CPSF6-205ENST00000550075 DZIP1Q86YF9 867 aaKnown RBP31.8■■■□□ 2.68
CPSF6-205ENST00000550075 C2orf69Q8N8R5 385 aa31.8■■■□□ 2.68
CPSF6-205ENST00000550075 ZNF512BQ96KM6 892 aaPredicted RBP31.8■■■□□ 2.68
CPSF6-205ENST00000550075 GBA2Q9HCG7 927 aaPredicted RBP31.8■■■□□ 2.68
CPSF6-205ENST00000550075 AAMPQ13685 434 aa31.79■■■□□ 2.68
CPSF6-205ENST00000550075 DLK2Q6UY11 383 aa31.79■■■□□ 2.68
CPSF6-205ENST00000550075 SLF2Q8IX21 1173 aa31.79■■■□□ 2.68
CPSF6-205ENST00000550075 TLR7Q9NYK1 1049 aaKnown RBP31.79■■■□□ 2.68
CPSF6-205ENST00000550075 TMOD2Q9NZR1 351 aa31.79■■■□□ 2.68
CPSF6-205ENST00000550075 MCAMP43121 646 aa31.78■■■□□ 2.68
CPSF6-205ENST00000550075 DEFB115Q30KQ5 88 aa31.78■■■□□ 2.68
CPSF6-205ENST00000550075 ZNF70Q9UC06 446 aaPredicted RBP31.78■■■□□ 2.68
CPSF6-205ENST00000550075 PAPPA2Q9BXP8 1791 aa31.77■■■□□ 2.68
CPSF6-205ENST00000550075 ERICH6Q7L0X2 663 aa31.77■■■□□ 2.68
CPSF6-205ENST00000550075 TDRD3Q9H7E2 651 aaKnown RBP31.77■■■□□ 2.68
CPSF6-205ENST00000550075 SCAF8Q9UPN6 1271 aaKnown RBP31.77■■■□□ 2.68
CPSF6-205ENST00000550075 IFIT2P09913 472 aaKnown RBP31.76■■■□□ 2.67
CPSF6-205ENST00000550075 FKBP1BP68106 108 aa31.76■■■□□ 2.67
CPSF6-205ENST00000550075 PI16Q6UXB8 463 aa31.76■■■□□ 2.67
CPSF6-205ENST00000550075 SAPCD2Q86UD0 394 aa31.76■■■□□ 2.67
CPSF6-205ENST00000550075 LRRCC1Q9C099 1032 aa31.76■■■□□ 2.67
CPSF6-205ENST00000550075 DEFB129Q9H1M3 183 aa31.76■■■□□ 2.67
CPSF6-205ENST00000550075 TNNI2P48788 182 aa31.75■■■□□ 2.67
CPSF6-205ENST00000550075 DIXDC1Q155Q3 683 aa31.75■■■□□ 2.67
CPSF6-205ENST00000550075 PAXIP1Q6ZW49 1069 aaPredicted RBP31.75■■■□□ 2.67
CPSF6-205ENST00000550075 HHIPL1Q96JK4 782 aa31.75■■■□□ 2.67
CPSF6-205ENST00000550075 AKAP11Q9UKA4 1901 aa31.75■■■□□ 2.67
CPSF6-205ENST00000550075 MYH2Q9UKX2 1941 aa31.75■■■□□ 2.67
CPSF6-205ENST00000550075 DAGLAQ9Y4D2 1042 aa31.74■■■□□ 2.67
CPSF6-205ENST00000550075 SUPT16HQ9Y5B9 1047 aaKnown RBP31.74■■■□□ 2.67
CPSF6-205ENST00000550075 AOX1Q06278 1338 aa31.74■■■□□ 2.67
CPSF6-205ENST00000550075 MAST2Q6P0Q8 1798 aa31.73■■■□□ 2.67
CPSF6-205ENST00000550075 ECE1P42892 770 aa31.73■■■□□ 2.67
CPSF6-205ENST00000550075 HUNKP57058 714 aa31.73■■■□□ 2.67
CPSF6-205ENST00000550075 DCTPP1Q9H773 170 aa31.73■■■□□ 2.67
CPSF6-205ENST00000550075 PCDHB15Q9Y5E8 787 aa31.73■■■□□ 2.67
CPSF6-205ENST00000550075 GSTO1P78417 241 aa31.72■■■□□ 2.67
CPSF6-205ENST00000550075 APOBEC3HQ6NTF7 200 aaKnown RBP31.72■■■□□ 2.67
CPSF6-205ENST00000550075 SNRKQ9NRH2 765 aa31.72■■■□□ 2.67
CPSF6-205ENST00000550075 LRP2BPQ9P2M1 347 aa31.72■■■□□ 2.67
CPSF6-205ENST00000550075 PRAMEF18Q5VWM3 479 aa31.71■■■□□ 2.67
CPSF6-205ENST00000550075 RAI14Q9P0K7 980 aa31.71■■■□□ 2.67
CPSF6-205ENST00000550075 IGSF3O75054 1194 aa31.7■■■□□ 2.67
CPSF6-205ENST00000550075 RASA3Q14644 834 aa31.7■■■□□ 2.67
CPSF6-205ENST00000550075 FKBP1CQ5VVH2 108 aa31.7■■■□□ 2.67
CPSF6-205ENST00000550075 JMYQ8N9B5 988 aa31.7■■■□□ 2.67
CPSF6-205ENST00000550075 BCL11AQ9H165 835 aa31.7■■■□□ 2.67
CPSF6-205ENST00000550075 GAKO14976 1311 aa31.7■■■□□ 2.66
CPSF6-205ENST00000550075 TCP10L2B9ZVM9 353 aa31.69■■■□□ 2.66
CPSF6-205ENST00000550075 LDHCP07864 332 aa31.69■■■□□ 2.66
CPSF6-205ENST00000550075 VEGFBP49765 207 aa31.69■■■□□ 2.66
CPSF6-205ENST00000550075 MECOMQ03112 1051 aa31.69■■■□□ 2.66
CPSF6-205ENST00000550075 TTLL12Q14166 644 aaPredicted RBP31.69■■■□□ 2.66
CPSF6-205ENST00000550075 SUPT20HL1Q3ZLR7 823 aa31.69■■■□□ 2.66
CPSF6-205ENST00000550075 TBC1D9Q6ZT07 1266 aa31.69■■■□□ 2.66
CPSF6-205ENST00000550075 CAPNS2Q96L46 248 aa31.68■■■□□ 2.66
CPSF6-205ENST00000550075 MROH7-TTC4A0A0A0MT08 1334 aa31.68■■■□□ 2.66
CPSF6-205ENST00000550075 ZAP70P43403 619 aa31.67■■■□□ 2.66
CPSF6-205ENST00000550075 FAM163AQ96GL9 167 aaPredicted RBP31.67■■■□□ 2.66
CPSF6-205ENST00000550075 ARMC9Q7Z3E5 817 aa31.66■■■□□ 2.66
CPSF6-205ENST00000550075 FAM83AQ86UY5 434 aa31.66■■■□□ 2.66
CPSF6-205ENST00000550075 WDR33Q9C0J8 1336 aaKnown RBP31.66■■■□□ 2.66
CPSF6-205ENST00000550075 CYP2E1P05181 493 aaPredicted RBP31.65■■■□□ 2.66
CPSF6-205ENST00000550075 GRM1Q13255 1194 aa31.65■■■□□ 2.66
CPSF6-205ENST00000550075 CYP4F22Q6NT55 531 aa31.65■■■□□ 2.66
CPSF6-205ENST00000550075 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms