RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 DNAH12Q6ZR08 3092 aa10.86□□□□□ -0.67
SMARCD1-207ENST00000549526 ATP5J2-PTCD1G3V325 749 aa10.86□□□□□ -0.67
SMARCD1-207ENST00000549526 ANKRD18AQ8IVF6 992 aa10.86□□□□□ -0.67
SMARCD1-207ENST00000549526 ADAMTS19Q8TE59 1207 aa10.86□□□□□ -0.67
SMARCD1-207ENST00000549526 PXYLP1Q8TE99 480 aa10.86□□□□□ -0.67
SMARCD1-207ENST00000549526 LBHD1Q9BQE6 289 aaPredicted RBP10.86□□□□□ -0.67
SMARCD1-207ENST00000549526 MED23Q9ULK4 1368 aa10.86□□□□□ -0.67
SMARCD1-207ENST00000549526 COL2A1P02458 1487 aaPredicted RBP10.86□□□□□ -0.67
SMARCD1-207ENST00000549526 DDX60LQ5H9U9 1706 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-207ENST00000549526 SPDYE5A6NIY4 337 aa10.85□□□□□ -0.67
SMARCD1-207ENST00000549526 F8W031 263 aaPredicted RBP10.85□□□□□ -0.67
SMARCD1-207ENST00000549526 PDHXO00330 501 aa10.85□□□□□ -0.67
SMARCD1-207ENST00000549526 IRF6O14896 467 aa10.85□□□□□ -0.67
SMARCD1-207ENST00000549526 RBM5P52756 815 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMARCD1-207ENST00000549526 CFAP100Q494V2 611 aa10.85□□□□□ -0.67
SMARCD1-207ENST00000549526 CC2D1BQ5T0F9 858 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-207ENST00000549526 ERO1BQ86YB8 467 aa10.85□□□□□ -0.67
SMARCD1-207ENST00000549526 CCDC85AQ96PX6 553 aaPredicted RBP10.85□□□□□ -0.67
SMARCD1-207ENST00000549526 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMARCD1-207ENST00000549526 COL3A1P02461 1466 aaPredicted RBP10.85□□□□□ -0.67
SMARCD1-207ENST00000549526 SPDYE2BA6NHP3 402 aa10.84□□□□□ -0.67
SMARCD1-207ENST00000549526 SPDYE6P0CI01 402 aa10.84□□□□□ -0.67
SMARCD1-207ENST00000549526 CNGB1Q14028 1251 aaPredicted RBP10.84□□□□□ -0.67
SMARCD1-207ENST00000549526 CCDC152Q4G0S7 254 aa10.84□□□□□ -0.67
SMARCD1-207ENST00000549526 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.84□□□□□ -0.671e-6■□□□□ 9.9
SMARCD1-207ENST00000549526 UHRF1Q96T88 793 aaPredicted RBP10.84□□□□□ -0.67
SMARCD1-207ENST00000549526 TTYH1Q9H313 450 aaPredicted RBP10.84□□□□□ -0.67
SMARCD1-207ENST00000549526 PIEZO1Q92508 2521 aa10.83□□□□□ -0.68
SMARCD1-207ENST00000549526 NCOR1O75376 2440 aa10.83□□□□□ -0.68
SMARCD1-207ENST00000549526 U2AF1L5P0DN76 240 aaPredicted RBP10.83□□□□□ -0.68
SMARCD1-207ENST00000549526 HSP90B1P14625 803 aaKnown RBP10.83□□□□□ -0.68
SMARCD1-207ENST00000549526 CCT4P50991 539 aaKnown RBP10.83□□□□□ -0.68
SMARCD1-207ENST00000549526 U2AF1Q01081 240 aaKnown RBP eCLIP10.83□□□□□ -0.68
SMARCD1-207ENST00000549526 TNFAIP1Q13829 316 aa10.83□□□□□ -0.68
SMARCD1-207ENST00000549526 ANKRD23Q86SG2 305 aa10.83□□□□□ -0.68
SMARCD1-207ENST00000549526 TXNRD3Q86VQ6 643 aa10.83□□□□□ -0.68
SMARCD1-207ENST00000549526 USP38Q8NB14 1042 aa10.83□□□□□ -0.68
SMARCD1-207ENST00000549526 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
SMARCD1-207ENST00000549526 ATXN2LQ8WWM7 1075 aaKnown RBP10.83□□□□□ -0.68
SMARCD1-207ENST00000549526 ASB2Q96Q27 587 aa10.83□□□□□ -0.68
SMARCD1-207ENST00000549526 ISCA1Q9BUE6 129 aa10.83□□□□□ -0.68
SMARCD1-207ENST00000549526 TNPO2O14787 897 aaKnown RBP10.82□□□□□ -0.68
SMARCD1-207ENST00000549526 PPIL2Q13356 520 aa10.82□□□□□ -0.68
SMARCD1-207ENST00000549526 IRF5Q13568 498 aa10.82□□□□□ -0.68
SMARCD1-207ENST00000549526 CDAN1Q8IWY9 1227 aa10.82□□□□□ -0.68
SMARCD1-207ENST00000549526 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.82□□□□□ -0.68
SMARCD1-207ENST00000549526 PLBD2Q8NHP8 589 aa10.82□□□□□ -0.68
SMARCD1-207ENST00000549526 PPM1EQ8WY54 764 aa10.82□□□□□ -0.68
SMARCD1-207ENST00000549526 ZKSCAN4Q969J2 545 aaPredicted RBP10.82□□□□□ -0.68
SMARCD1-207ENST00000549526 MINPP1Q9UNW1 487 aa10.82□□□□□ -0.68
SMARCD1-207ENST00000549526 NUDCQ9Y266 331 aa10.82□□□□□ -0.68
SMARCD1-207ENST00000549526 SNCAIPQ9Y6H5 919 aa10.82□□□□□ -0.68
SMARCD1-207ENST00000549526 AOX1Q06278 1338 aa10.82□□□□□ -0.68
SMARCD1-207ENST00000549526 CACNA1AO00555 2505 aa10.81□□□□□ -0.68
SMARCD1-207ENST00000549526 LRFN3Q9BTN0 628 aa10.81□□□□□ -0.68
SMARCD1-207ENST00000549526 HMX1Q9NP08 348 aaPredicted RBP10.81□□□□□ -0.68
SMARCD1-207ENST00000549526 SPEF2Q9C093 1822 aa10.81□□□□□ -0.68
SMARCD1-207ENST00000549526 DLG5Q8TDM6 1919 aa10.8□□□□□ -0.68
SMARCD1-207ENST00000549526 TCP10L2B9ZVM9 353 aa10.8□□□□□ -0.68
SMARCD1-207ENST00000549526 CYP2C8P10632 490 aa10.8□□□□□ -0.68
SMARCD1-207ENST00000549526 BCRP11274 1271 aa10.8□□□□□ -0.68
SMARCD1-207ENST00000549526 SMAD3P84022 425 aaKnown RBP10.8□□□□□ -0.68
SMARCD1-207ENST00000549526 SHHQ15465 462 aa10.8□□□□□ -0.68
SMARCD1-207ENST00000549526 CERS5Q8N5B7 392 aa10.8□□□□□ -0.68
SMARCD1-207ENST00000549526 ZBTB38Q8NAP3 1195 aaPredicted RBP10.8□□□□□ -0.68
SMARCD1-207ENST00000549526 TEPSINQ96N21 525 aa10.8□□□□□ -0.68
SMARCD1-207ENST00000549526 WRNIP1Q96S55 665 aa10.8□□□□□ -0.68
SMARCD1-207ENST00000549526 TMEM39BQ9GZU3 492 aa10.8□□□□□ -0.68
SMARCD1-207ENST00000549526 ZNF70Q9UC06 446 aaPredicted RBP10.8□□□□□ -0.68
SMARCD1-207ENST00000549526 PFASO15067 1338 aa10.8□□□□□ -0.68
SMARCD1-207ENST00000549526 DOCK3Q8IZD9 2030 aa10.79□□□□□ -0.68
SMARCD1-207ENST00000549526 PDE8AO60658 829 aa10.79□□□□□ -0.68
SMARCD1-207ENST00000549526 TNNI2P48788 182 aa10.79□□□□□ -0.68
SMARCD1-207ENST00000549526 MRPS5P82675 430 aaKnown RBP10.79□□□□□ -0.68
SMARCD1-207ENST00000549526 PPATQ06203 517 aa10.79□□□□□ -0.68
SMARCD1-207ENST00000549526 LRRC26Q2I0M4 334 aa10.79□□□□□ -0.68
SMARCD1-207ENST00000549526 CFAP53Q96M91 514 aa10.79□□□□□ -0.68
SMARCD1-207ENST00000549526 CDC5LQ99459 802 aaKnown RBP10.79□□□□□ -0.68
SMARCD1-207ENST00000549526 PARK7Q99497 189 aaKnown RBP10.79□□□□□ -0.68
SMARCD1-207ENST00000549526 P2RX7Q99572 595 aaKnown RBP10.79□□□□□ -0.68
SMARCD1-207ENST00000549526 TDRD3Q9H7E2 651 aaKnown RBP10.79□□□□□ -0.68
SMARCD1-207ENST00000549526 TSPYL4Q9UJ04 414 aa10.79□□□□□ -0.68
SMARCD1-207ENST00000549526 LEMD3Q9Y2U8 911 aa10.79□□□□□ -0.68
SMARCD1-207ENST00000549526 TCF20Q9UGU0 1960 aaKnown RBP10.79□□□□□ -0.68
SMARCD1-207ENST00000549526 SPDYE2Q495Y8 402 aa10.78□□□□□ -0.68
SMARCD1-207ENST00000549526 JARID2Q92833 1246 aaPredicted RBP10.78□□□□□ -0.68
SMARCD1-207ENST00000549526 COA7Q96BR5 231 aa10.78□□□□□ -0.68
SMARCD1-207ENST00000549526 CD209Q9NNX6 404 aa10.78□□□□□ -0.68
SMARCD1-207ENST00000549526 BSDC1Q9NW68 430 aaPredicted RBP10.78□□□□□ -0.68
SMARCD1-207ENST00000549526 THEGQ9P2T0 379 aa10.78□□□□□ -0.68
SMARCD1-207ENST00000549526 PRKAG2Q9UGJ0 569 aa10.78□□□□□ -0.68
SMARCD1-207ENST00000549526 OGDHLQ9ULD0 1010 aa10.78□□□□□ -0.68
SMARCD1-207ENST00000549526 HMGCRP04035 888 aa10.77□□□□□ -0.69
SMARCD1-207ENST00000549526 NEFMP07197 916 aa10.77□□□□□ -0.69
SMARCD1-207ENST00000549526 KLRK1P26718 216 aa10.77□□□□□ -0.69
SMARCD1-207ENST00000549526 TRIM28Q13263 835 aaKnown RBP10.77□□□□□ -0.69
SMARCD1-207ENST00000549526 GRIN2CQ14957 1233 aa10.77□□□□□ -0.69
SMARCD1-207ENST00000549526 MUC6Q6W4X9 2439 aa10.77□□□□□ -0.69
SMARCD1-207ENST00000549526 ARAP2Q8WZ64 1704 aa10.76□□□□□ -0.69
SMARCD1-207ENST00000549526 KCNJ4P48050 445 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms