RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MCM7P33993 719 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 CCDC12Q8WUD4 166 aaPredicted RBP18.48■□□□□ 0.55
VARS2-212ENST00000542001 ESR2Q92731 530 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 PPP1R1BQ9UD71 204 aaPredicted RBP18.48■□□□□ 0.55
VARS2-212ENST00000542001 V9GY48 417 aaPredicted RBP18.48■□□□□ 0.55
VARS2-212ENST00000542001 BCAMP50895 628 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 GSDMDP57764 484 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 GOLGA8FQ08AF8 430 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 GOLGA8DPQ0D2H9 430 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 ARID5BQ14865 1188 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 ATP10DQ9P241 1426 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 VWA3AA6NCI4 1184 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 PDIA3P30101 505 aaKnown RBP18.48■□□□□ 0.55
VARS2-212ENST00000542001 UBA7P41226 1012 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 STIM1Q13586 685 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 FAM182BQ5T319 152 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 CCDC70Q6NSX1 233 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 KIAA1328Q86T90 577 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 CCDC102AQ96A19 550 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 MCM9Q9NXL9 1143 aa18.48■□□□□ 0.55
VARS2-212ENST00000542001 MYO3AQ8NEV4 1616 aa18.47■□□□□ 0.55
VARS2-212ENST00000542001 AXDND1Q5T1B0 1012 aaPredicted RBP18.47■□□□□ 0.55
VARS2-212ENST00000542001 RRAGBQ5VZM2 374 aa18.47■□□□□ 0.55
VARS2-212ENST00000542001 C8orf37Q96NL8 207 aa18.47■□□□□ 0.55
VARS2-212ENST00000542001 ADGRB1O14514 1584 aa18.47■□□□□ 0.55
VARS2-212ENST00000542001 IQGAP1P46940 1657 aa18.47■□□□□ 0.55
VARS2-212ENST00000542001 M0R2C6 588 aa18.47■□□□□ 0.55
VARS2-212ENST00000542001 CCP110O43303 1012 aa18.47■□□□□ 0.55
VARS2-212ENST00000542001 PUS7LQ9H0K6 701 aaKnown RBP18.47■□□□□ 0.55
VARS2-212ENST00000542001 MRVI1Q9Y6F6 885 aa18.47■□□□□ 0.55
VARS2-212ENST00000542001 CRB1P82279 1406 aa18.47■□□□□ 0.55
VARS2-212ENST00000542001 MAGEB6P1A0A0J9YX57 407 aa18.47■□□□□ 0.55
VARS2-212ENST00000542001 CASQ1P31415 396 aa18.47■□□□□ 0.55
VARS2-212ENST00000542001 PNOCQ13519 176 aa18.47■□□□□ 0.55
VARS2-212ENST00000542001 SLAIN2Q9P270 581 aa18.47■□□□□ 0.55
VARS2-212ENST00000542001 ZBTB1Q9Y2K1 713 aa18.47■□□□□ 0.55
VARS2-212ENST00000542001 MAST3O60307 1309 aa18.47■□□□□ 0.55
VARS2-212ENST00000542001 ADCY9O60503 1353 aa18.46■□□□□ 0.55
VARS2-212ENST00000542001 TMEM94Q12767 1356 aa18.46■□□□□ 0.55
VARS2-212ENST00000542001 PCDHA7Q9UN72 937 aa18.46■□□□□ 0.55
VARS2-212ENST00000542001 KIDINS220Q9ULH0 1771 aa18.46■□□□□ 0.55
VARS2-212ENST00000542001 AK9Q5TCS8 1911 aa18.46■□□□□ 0.55
VARS2-212ENST00000542001 MED14O60244 1454 aa18.46■□□□□ 0.55
VARS2-212ENST00000542001 NDUFA8P51970 172 aa18.46■□□□□ 0.55
VARS2-212ENST00000542001 HEATR3Q7Z4Q2 680 aa18.46■□□□□ 0.55
VARS2-212ENST00000542001 CAMSAP1Q5T5Y3 1602 aa18.46■□□□□ 0.55
VARS2-212ENST00000542001 CCT6AP40227 531 aaKnown RBP18.46■□□□□ 0.55
VARS2-212ENST00000542001 GYG1P46976 350 aa18.46■□□□□ 0.55
VARS2-212ENST00000542001 SH3TC1Q8TE82 1336 aa18.46■□□□□ 0.55
VARS2-212ENST00000542001 NEXMIFQ5QGS0 1516 aa18.46■□□□□ 0.54
VARS2-212ENST00000542001 TRIM75PA6NK02 468 aa18.45■□□□□ 0.54
VARS2-212ENST00000542001 MYSM1Q5VVJ2 828 aa18.45■□□□□ 0.54
VARS2-212ENST00000542001 C11orf57Q6ZUT1 292 aaPredicted RBP18.45■□□□□ 0.54
VARS2-212ENST00000542001 KRT23Q9C075 422 aa18.45■□□□□ 0.54
VARS2-212ENST00000542001 XPO4Q9C0E2 1151 aaKnown RBP18.45■□□□□ 0.54
VARS2-212ENST00000542001 KAT14Q9H8E8 782 aa18.45■□□□□ 0.54
VARS2-212ENST00000542001 TCEAL9Q9UHQ7 104 aa18.45■□□□□ 0.54
VARS2-212ENST00000542001 SSH2Q76I76 1423 aa18.45■□□□□ 0.54
VARS2-212ENST00000542001 A0A0G2JLW4 131 aa18.45■□□□□ 0.54
VARS2-212ENST00000542001 DRC1Q96MC2 740 aa18.45■□□□□ 0.54
VARS2-212ENST00000542001 SEC31BQ9NQW1 1179 aa18.45■□□□□ 0.54
VARS2-212ENST00000542001 FAM170AA1A519 330 aa18.45■□□□□ 0.54
VARS2-212ENST00000542001 ZSCAN12O43309 604 aa18.45■□□□□ 0.54
VARS2-212ENST00000542001 PICALMQ13492 652 aa18.45■□□□□ 0.54
VARS2-212ENST00000542001 VPS54Q9P1Q0 977 aa18.45■□□□□ 0.54
VARS2-212ENST00000542001 ARAP3Q8WWN8 1544 aa18.45■□□□□ 0.54
VARS2-212ENST00000542001 BTBD18B2RXH4 712 aa18.44■□□□□ 0.54
VARS2-212ENST00000542001 NSUN7Q8NE18 718 aaKnown RBP18.44■□□□□ 0.54
VARS2-212ENST00000542001 UBA5Q9GZZ9 404 aa18.44■□□□□ 0.54
VARS2-212ENST00000542001 CENPHQ9H3R5 247 aa18.44■□□□□ 0.54
VARS2-212ENST00000542001 MATR3P43243 847 aaKnown RBP eCLIP18.44■□□□□ 0.54
VARS2-212ENST00000542001 TOB2Q14106 344 aaPredicted RBP18.44■□□□□ 0.54
VARS2-212ENST00000542001 CCDC96Q2M329 555 aa18.44■□□□□ 0.54
VARS2-212ENST00000542001 DHX37Q8IY37 1157 aaKnown RBP18.44■□□□□ 0.54
VARS2-212ENST00000542001 KCNH3Q9ULD8 1083 aa18.44■□□□□ 0.54
VARS2-212ENST00000542001 LONRF3Q496Y0 759 aa18.44■□□□□ 0.54
VARS2-212ENST00000542001 FAM47AQ5JRC9 791 aa18.44■□□□□ 0.54
VARS2-212ENST00000542001 CCDC43Q96MW1 224 aaKnown RBP18.44■□□□□ 0.54
VARS2-212ENST00000542001 PRKAB2O43741 272 aa18.44■□□□□ 0.54
VARS2-212ENST00000542001 CEP89Q96ST8 783 aa18.44■□□□□ 0.54
VARS2-212ENST00000542001 AATFQ9NY61 560 aaKnown RBP eCLIP18.44■□□□□ 0.54
VARS2-212ENST00000542001 CGNQ9P2M7 1197 aaKnown RBP18.44■□□□□ 0.54
VARS2-212ENST00000542001 SAP30BPQ9UHR5 308 aaKnown RBP18.44■□□□□ 0.54
VARS2-212ENST00000542001 ABCA9Q8IUA7 1624 aa18.43■□□□□ 0.54
VARS2-212ENST00000542001 CAVIN2O95810 425 aa18.43■□□□□ 0.54
VARS2-212ENST00000542001 TTC14Q96N46 770 aa18.43■□□□□ 0.54
VARS2-212ENST00000542001 NLRP3Q96P20 1036 aa18.43■□□□□ 0.54
VARS2-212ENST00000542001 BCL2L12Q9HB09 334 aa18.43■□□□□ 0.54
VARS2-212ENST00000542001 LAMC1P11047 1609 aa18.43■□□□□ 0.54
VARS2-212ENST00000542001 PDE6AP16499 860 aa18.43■□□□□ 0.54
VARS2-212ENST00000542001 KIF5CO60282 957 aa18.43■□□□□ 0.54
VARS2-212ENST00000542001 NEMFO60524 1076 aa18.43■□□□□ 0.54
VARS2-212ENST00000542001 RUFY1Q96T51 708 aa18.43■□□□□ 0.54
VARS2-212ENST00000542001 SETDB2Q96T68 719 aa18.43■□□□□ 0.54
VARS2-212ENST00000542001 PUF60Q9UHX1 559 aaKnown RBP18.43■□□□□ 0.54
VARS2-212ENST00000542001 CYP2E1P05181 493 aaPredicted RBP18.42■□□□□ 0.54
VARS2-212ENST00000542001 EIF6P56537 245 aaKnown RBP18.42■□□□□ 0.54
VARS2-212ENST00000542001 FANCCQ00597 558 aa18.42■□□□□ 0.54
VARS2-212ENST00000542001 PFKFB2O60825 505 aa18.42■□□□□ 0.54
VARS2-212ENST00000542001 CCDC178Q5BJE1 867 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms