RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 PTH1RQ03431 593 aa15.42■□□□□ 0.06
CDK5RAP3-202ENST00000536708 WASHC4Q2M389 1173 aa15.42■□□□□ 0.06
CDK5RAP3-202ENST00000536708 C15orf52Q6ZUT6 534 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-202ENST00000536708 ABCF2Q9UG63 623 aa15.42■□□□□ 0.06
CDK5RAP3-202ENST00000536708 MYH2Q9UKX2 1941 aa15.41■□□□□ 0.06
CDK5RAP3-202ENST00000536708 PSME4Q14997 1843 aa15.41■□□□□ 0.06
CDK5RAP3-202ENST00000536708 HIP1O00291 1037 aa15.41■□□□□ 0.06
CDK5RAP3-202ENST00000536708 RNF113AO15541 343 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-202ENST00000536708 ZMYM1Q5SVZ6 1142 aa15.41■□□□□ 0.06
CDK5RAP3-202ENST00000536708 SLC9C2Q5TAH2 1124 aa15.41■□□□□ 0.06
CDK5RAP3-202ENST00000536708 OSBP2Q969R2 916 aa15.41■□□□□ 0.06
CDK5RAP3-202ENST00000536708 LSG1Q9H089 658 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-202ENST00000536708 PDE6AP16499 860 aa15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 TGFB2P61812 414 aa15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 TTF1Q15361 905 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 DOK7Q18PE1 504 aa15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 TDRD7Q8NHU6 1098 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 ZNF384Q8TF68 577 aa15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 TMX4Q9H1E5 349 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 SPON1Q9HCB6 807 aa15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 CD209Q9NNX6 404 aa15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 DENND2AQ9ULE3 1009 aa15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 ZNF532Q9HCE3 1301 aa15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 PRDX5P30044 214 aa15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 ADD2P35612 726 aa15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 GRIK5Q16478 980 aa15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 ADGRA1Q86SQ6 560 aa15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 MAGEB6Q8N7X4 407 aa15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 RUFY2Q8WXA3 655 aa15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 PUS7LQ9H0K6 701 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-202ENST00000536708 CCDC171Q6TFL3 1326 aa15.39■□□□□ 0.05
CDK5RAP3-202ENST00000536708 CDK5RAP2Q96SN8 1893 aa15.39■□□□□ 0.05
CDK5RAP3-202ENST00000536708 TCRBV5S4A2TA0A5A2 114 aa15.39■□□□□ 0.05
CDK5RAP3-202ENST00000536708 SEMA3EO15041 775 aa15.39■□□□□ 0.05
CDK5RAP3-202ENST00000536708 VPS53Q5VIR6 699 aa15.39■□□□□ 0.05
CDK5RAP3-202ENST00000536708 DBNDD1Q9H9R9 158 aa15.39■□□□□ 0.05
CDK5RAP3-202ENST00000536708 PIM2Q9P1W9 311 aa15.39■□□□□ 0.05
CDK5RAP3-202ENST00000536708 LRP2BPQ9P2M1 347 aa15.39■□□□□ 0.05
CDK5RAP3-202ENST00000536708 BAZ2AQ9UIF9 1905 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-202ENST00000536708 IL1R1P14778 569 aa15.38■□□□□ 0.05
CDK5RAP3-202ENST00000536708 AOC3Q16853 763 aa15.38■□□□□ 0.05
CDK5RAP3-202ENST00000536708 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.38■□□□□ 0.051e-7■■■□□ 14.8
CDK5RAP3-202ENST00000536708 CD2APQ9Y5K6 639 aa15.38■□□□□ 0.05
CDK5RAP3-202ENST00000536708 PDS5AQ29RF7 1337 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-202ENST00000536708 LAMA4Q16363 1823 aa15.38■□□□□ 0.05
CDK5RAP3-202ENST00000536708 MCMDC2Q4G0Z9 681 aa15.38■□□□□ 0.05
CDK5RAP3-202ENST00000536708 CCDC93Q567U6 631 aa15.38■□□□□ 0.05
CDK5RAP3-202ENST00000536708 PPP1R9BQ96SB3 815 aa15.38■□□□□ 0.05
CDK5RAP3-202ENST00000536708 ZC3H12CQ9C0D7 883 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-202ENST00000536708 RAI14Q9P0K7 980 aa15.38■□□□□ 0.05
CDK5RAP3-202ENST00000536708 PRPF40AO75400 957 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-202ENST00000536708 MAP3K12Q12852 859 aa15.37■□□□□ 0.05
CDK5RAP3-202ENST00000536708 APPBP2Q92624 585 aa15.37■□□□□ 0.05
CDK5RAP3-202ENST00000536708 KCNB2Q92953 911 aa15.37■□□□□ 0.05
CDK5RAP3-202ENST00000536708 TTC14Q96N46 770 aa15.37■□□□□ 0.05
CDK5RAP3-202ENST00000536708 RTFDC1Q9BY42 306 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-202ENST00000536708 KCNQ5Q9NR82 932 aa15.37■□□□□ 0.05
CDK5RAP3-202ENST00000536708 SNX14Q9Y5W7 946 aa15.37■□□□□ 0.05
CDK5RAP3-202ENST00000536708 ESPNB1AK53 854 aa15.36■□□□□ 0.05
CDK5RAP3-202ENST00000536708 FOXP2O15409 715 aa15.36■□□□□ 0.05
CDK5RAP3-202ENST00000536708 ZFYP08048 801 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-202ENST00000536708 CCDC173Q0VFZ6 552 aa15.36■□□□□ 0.05
CDK5RAP3-202ENST00000536708 ZSCAN23Q3MJ62 389 aa15.36■□□□□ 0.05
CDK5RAP3-202ENST00000536708 DALRD3Q5D0E6 543 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP3-202ENST00000536708 GPT2Q8TD30 523 aa15.36■□□□□ 0.05
CDK5RAP3-202ENST00000536708 FBXW7Q969H0 707 aa15.36■□□□□ 0.05
CDK5RAP3-202ENST00000536708 MXD3Q9BW11 206 aa15.36■□□□□ 0.05
CDK5RAP3-202ENST00000536708 FHDC1Q9C0D6 1143 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-202ENST00000536708 KIAA1211Q6ZU35 1233 aa15.36■□□□□ 0.05
CDK5RAP3-202ENST00000536708 MIGA1Q8NAN2 632 aa15.36■□□□□ 0.05
CDK5RAP3-202ENST00000536708 ZNF277Q9NRM2 450 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-202ENST00000536708 HELLSQ9NRZ9 838 aa15.36■□□□□ 0.05
CDK5RAP3-202ENST00000536708 BCS1LQ9Y276 419 aa15.36■□□□□ 0.05
CDK5RAP3-202ENST00000536708 GPAA1O43292 621 aa15.35■□□□□ 0.05
CDK5RAP3-202ENST00000536708 MBD3O95983 291 aa15.35■□□□□ 0.05
CDK5RAP3-202ENST00000536708 GTF2IP78347 998 aa15.35■□□□□ 0.05
CDK5RAP3-202ENST00000536708 MECOMQ03112 1051 aa15.35■□□□□ 0.05
CDK5RAP3-202ENST00000536708 CAVIN1Q6NZI2 390 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-202ENST00000536708 EYA3Q99504 573 aa15.35■□□□□ 0.05
CDK5RAP3-202ENST00000536708 UPF3BQ9BZI7 483 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-202ENST00000536708 COA1Q9GZY4 146 aa15.35■□□□□ 0.05
CDK5RAP3-202ENST00000536708 TAF6LQ9Y6J9 622 aa15.35■□□□□ 0.05
CDK5RAP3-202ENST00000536708 PPIP5K2O43314 1243 aa15.35■□□□□ 0.05
CDK5RAP3-202ENST00000536708 ECE2O60344 883 aa15.35■□□□□ 0.05
CDK5RAP3-202ENST00000536708 NASPP49321 788 aaPredicted RBP15.35■□□□□ 0.05
CDK5RAP3-202ENST00000536708 UBE3CQ15386 1083 aa15.35■□□□□ 0.05
CDK5RAP3-202ENST00000536708 RBM8AQ9Y5S9 174 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-202ENST00000536708 MBD4O95243 580 aa15.34■□□□□ 0.05
CDK5RAP3-202ENST00000536708 KIAA2012Q0VF49 1180 aa15.34■□□□□ 0.05
CDK5RAP3-202ENST00000536708 DIXDC1Q155Q3 683 aa15.34■□□□□ 0.05
CDK5RAP3-202ENST00000536708 MFSD14BQ5SR56 506 aa15.34■□□□□ 0.05
CDK5RAP3-202ENST00000536708 CC2D2BQ6DHV5 1058 aa15.34■□□□□ 0.05
CDK5RAP3-202ENST00000536708 ZSCAN25Q6NSZ9 544 aa15.34■□□□□ 0.05
CDK5RAP3-202ENST00000536708 CERS5Q8N5B7 392 aa15.34■□□□□ 0.05
CDK5RAP3-202ENST00000536708 NSUN4Q96CB9 384 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP3-202ENST00000536708 TM6SF1Q9BZW5 370 aa15.34■□□□□ 0.05
CDK5RAP3-202ENST00000536708 CYP7A1P22680 504 aa15.33■□□□□ 0.05
CDK5RAP3-202ENST00000536708 LRRFIP1Q32MZ4 808 aaKnown RBP15.33■□□□□ 0.05
CDK5RAP3-202ENST00000536708 RASEFQ8IZ41 740 aa15.33■□□□□ 0.05
CDK5RAP3-202ENST00000536708 LCORLQ8N3X6 602 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms