RNA–Protein interactions for RNA: ENST00000536089.5

MDM2-223, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-223ENST00000536089 C2CD2LO14523 706 aa6.25□□□□□ -1.41
MDM2-223ENST00000536089 RLBP1P12271 317 aa6.25□□□□□ -1.41
MDM2-223ENST00000536089 ALAS2P22557 587 aa6.25□□□□□ -1.41
MDM2-223ENST00000536089 RACK1P63244 317 aaKnown RBP6.25□□□□□ -1.41
MDM2-223ENST00000536089 C1orf229Q6ZS94 237 aaPredicted RBP6.25□□□□□ -1.41
MDM2-223ENST00000536089 COPRSQ9NQ92 184 aa6.25□□□□□ -1.41
MDM2-223ENST00000536089 KBTBD4Q9NVX7 518 aa6.25□□□□□ -1.41
MDM2-223ENST00000536089 ARAP1Q96P48 1450 aa6.25□□□□□ -1.41
MDM2-223ENST00000536089 CCDC88BA6NC98 1476 aa6.24□□□□□ -1.41
MDM2-223ENST00000536089 MAGI1Q96QZ7 1491 aaPredicted RBP6.24□□□□□ -1.41
MDM2-223ENST00000536089 C1QTNF9BB2RNN3 333 aa6.24□□□□□ -1.41
MDM2-223ENST00000536089 ADH7P40394 386 aa6.24□□□□□ -1.41
MDM2-223ENST00000536089 DGKGP49619 791 aa6.24□□□□□ -1.41
MDM2-223ENST00000536089 ZNF157P51786 506 aaPredicted RBP6.24□□□□□ -1.41
MDM2-223ENST00000536089 SV2BQ7L1I2 683 aa6.24□□□□□ -1.41
MDM2-223ENST00000536089 PLD4Q96BZ4 506 aa6.24□□□□□ -1.41
MDM2-223ENST00000536089 TINF2Q9BSI4 451 aa6.24□□□□□ -1.41
MDM2-223ENST00000536089 BHLHE41Q9C0J9 482 aaPredicted RBP6.24□□□□□ -1.41
MDM2-223ENST00000536089 SMG9Q9H0W8 520 aaKnown RBP6.24□□□□□ -1.41
MDM2-223ENST00000536089 SLC6A14Q9UN76 642 aa6.24□□□□□ -1.41
MDM2-223ENST00000536089 NEURL1BA8MQ27 555 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 NFKBIEO00221 500 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 PTPRAP18433 802 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 ATP2B1P20020 1258 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 ITPKAP23677 461 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 ARID5AQ03989 594 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 PPP2R3AQ06190 1150 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 ERMP1Q7Z2K6 904 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 SLC43A3Q8NBI5 491 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 BSNDQ8WZ55 320 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 UBXN4Q92575 508 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 TNFRSF25Q93038 417 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 POP1Q99575 1024 aaKnown RBP6.23□□□□□ -1.41
MDM2-223ENST00000536089 TRIM56Q9BRZ2 755 aaKnown RBP6.23□□□□□ -1.41
MDM2-223ENST00000536089 SPON2Q9BUD6 331 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 RSRP1Q9BUV0 290 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 LACRTQ9GZZ8 138 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 SRA1Q9HD15 236 aaKnown RBP6.23□□□□□ -1.41
MDM2-223ENST00000536089 PRKAG2Q9UGJ0 569 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 SAMM50Q9Y512 469 aa6.23□□□□□ -1.41
MDM2-223ENST00000536089 POLA1P09884 1462 aaPredicted RBP6.22□□□□□ -1.41
MDM2-223ENST00000536089 CLASP1Q7Z460 1538 aa6.22□□□□□ -1.41
MDM2-223ENST00000536089 CELA3AP09093 270 aa6.22□□□□□ -1.41
MDM2-223ENST00000536089 HOXB4P17483 251 aaPredicted RBP6.22□□□□□ -1.41
MDM2-223ENST00000536089 CABP4P57796 275 aa6.22□□□□□ -1.41
MDM2-223ENST00000536089 PERM1Q5SV97 790 aa6.22□□□□□ -1.41
MDM2-223ENST00000536089 DIEXFQ68CQ4 756 aaKnown RBP6.22□□□□□ -1.41
MDM2-223ENST00000536089 CYB5RLQ6IPT4 315 aa6.22□□□□□ -1.41
MDM2-223ENST00000536089 GDF6Q6KF10 455 aaPredicted RBP6.22□□□□□ -1.41
MDM2-223ENST00000536089 CD163Q86VB7 1156 aa6.22□□□□□ -1.41
MDM2-223ENST00000536089 MUC3BQ9H195 1237 aa6.22□□□□□ -1.41
MDM2-223ENST00000536089 ZNF576Q9H609 170 aa6.22□□□□□ -1.41
MDM2-223ENST00000536089 SEC31BQ9NQW1 1179 aa6.22□□□□□ -1.41
MDM2-223ENST00000536089 RGS9O75916 674 aaPredicted RBP6.21□□□□□ -1.42
MDM2-223ENST00000536089 SPATA31C1P0DKV0 1188 aa6.21□□□□□ -1.42
MDM2-223ENST00000536089 GTF2F1P35269 517 aaKnown RBP eCLIP6.21□□□□□ -1.42
MDM2-223ENST00000536089 LIG3P49916 1009 aa6.21□□□□□ -1.42
MDM2-223ENST00000536089 PAK2Q13177 524 aa6.21□□□□□ -1.42
MDM2-223ENST00000536089 RPS26P11Q5JNZ5 115 aaPredicted RBP6.21□□□□□ -1.42
MDM2-223ENST00000536089 SNAP47Q5SQN1 464 aa6.21□□□□□ -1.42
MDM2-223ENST00000536089 TTBK2Q6IQ55 1244 aa6.21□□□□□ -1.42
MDM2-223ENST00000536089 PSAPL1Q6NUJ1 521 aa6.21□□□□□ -1.42
MDM2-223ENST00000536089 CHSY3Q70JA7 882 aa6.21□□□□□ -1.42
MDM2-223ENST00000536089 KIAA0825Q8IV33 1275 aa6.21□□□□□ -1.42
MDM2-223ENST00000536089 DDX54Q8TDD1 881 aaKnown RBP6.21□□□□□ -1.42
MDM2-223ENST00000536089 NUDT8Q8WV74 236 aa6.21□□□□□ -1.42
MDM2-223ENST00000536089 GPRASP2Q96D09 838 aa6.21□□□□□ -1.42
MDM2-223ENST00000536089 TMEM74Q96NL1 305 aa6.21□□□□□ -1.42
MDM2-223ENST00000536089 CLEC4MQ9H2X3 399 aaPredicted RBP6.21□□□□□ -1.42
MDM2-223ENST00000536089 TMEM39AQ9NV64 488 aa6.21□□□□□ -1.42
MDM2-223ENST00000536089 PBRM1Q86U86 1689 aa6.2□□□□□ -1.42
MDM2-223ENST00000536089 ELOA3CA0A087WX78 387 aaPredicted RBP6.2□□□□□ -1.42
MDM2-223ENST00000536089 ELOA3DA6NLF2 546 aaPredicted RBP6.2□□□□□ -1.42
MDM2-223ENST00000536089 CDC25BP30305 580 aa6.2□□□□□ -1.42
MDM2-223ENST00000536089 EIF4A3P38919 411 aaKnown RBP6.2□□□□□ -1.42
MDM2-223ENST00000536089 GATA4P43694 442 aa6.2□□□□□ -1.42
MDM2-223ENST00000536089 FAM160A1Q05DH4 1040 aa6.2□□□□□ -1.42
MDM2-223ENST00000536089 PCDH1Q08174 1060 aa6.2□□□□□ -1.42
MDM2-223ENST00000536089 ELOA3BQ3SY89 546 aa6.2□□□□□ -1.42
MDM2-223ENST00000536089 ELOA3Q8NG57 546 aa6.2□□□□□ -1.42
MDM2-223ENST00000536089 ANKRD24Q8TF21 1146 aa6.2□□□□□ -1.42
MDM2-223ENST00000536089 NECAB3Q96P71 396 aaPredicted RBP6.2□□□□□ -1.42
MDM2-223ENST00000536089 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.2□□□□□ -1.423e-24■□□□□ 9.6
MDM2-223ENST00000536089 CBX8Q9HC52 389 aa6.2□□□□□ -1.42
MDM2-223ENST00000536089 TRIM33Q9UPN9 1127 aa6.2□□□□□ -1.42
MDM2-223ENST00000536089 AQRO60306 1485 aaKnown RBP eCLIP6.2□□□□□ -1.426e-7■■■□□ 19.2
MDM2-223ENST00000536089 ADARB2-AS1A8MUL3 147 aa6.19□□□□□ -1.42
MDM2-223ENST00000536089 CDC27P30260 824 aa6.19□□□□□ -1.42
MDM2-223ENST00000536089 FAAP100Q0VG06 881 aa6.19□□□□□ -1.42
MDM2-223ENST00000536089 IKBKEQ14164 716 aa6.19□□□□□ -1.42
MDM2-223ENST00000536089 PRRT3Q5FWE3 981 aa6.19□□□□□ -1.42
MDM2-223ENST00000536089 FCHSD1Q86WN1 690 aa6.19□□□□□ -1.42
MDM2-223ENST00000536089 PSMG3-AS1Q96PY0 264 aa6.19□□□□□ -1.42
MDM2-223ENST00000536089 LPIN3Q9BQK8 851 aa6.19□□□□□ -1.42
MDM2-223ENST00000536089 KRTAP4-8Q9BYQ9 185 aa6.19□□□□□ -1.42
MDM2-223ENST00000536089 JPH1Q9HDC5 661 aaPredicted RBP6.19□□□□□ -1.42
MDM2-223ENST00000536089 SH2B1Q9NRF2 756 aaPredicted RBP6.19□□□□□ -1.42
MDM2-223ENST00000536089 FRRS1LQ9P0K9 344 aa6.19□□□□□ -1.42
MDM2-223ENST00000536089 KLF15Q9UIH9 416 aa6.19□□□□□ -1.42
MDM2-223ENST00000536089 NAGPAQ9UK23 515 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms