RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CCDC158Q5M9N0 1113 aa21.95■■□□□ 1.1
DDX55-204ENST00000536079 CLASRPQ8N2M8 674 aaKnown RBP21.95■■□□□ 1.1
DDX55-204ENST00000536079 LRRCC1Q9C099 1032 aa21.95■■□□□ 1.1
DDX55-204ENST00000536079 PDS5AQ29RF7 1337 aaKnown RBP21.95■■□□□ 1.1
DDX55-204ENST00000536079 SPDYE2BA6NHP3 402 aa21.94■■□□□ 1.1
DDX55-204ENST00000536079 UQCRFS1P1P0C7P4 283 aa21.94■■□□□ 1.1
DDX55-204ENST00000536079 SPDYE6P0CI01 402 aa21.94■■□□□ 1.1
DDX55-204ENST00000536079 ZNF384Q8TF68 577 aa21.94■■□□□ 1.1
DDX55-204ENST00000536079 ZAP70P43403 619 aa21.93■■□□□ 1.1
DDX55-204ENST00000536079 MMP14P50281 582 aa21.93■■□□□ 1.1
DDX55-204ENST00000536079 RBM5P52756 815 aaKnown RBP eCLIP21.93■■□□□ 1.14e-6■■□□□ 12.4
DDX55-204ENST00000536079 DIXDC1Q155Q3 683 aa21.93■■□□□ 1.1
DDX55-204ENST00000536079 ZNF512BQ96KM6 892 aaPredicted RBP21.93■■□□□ 1.1
DDX55-204ENST00000536079 SERPINA10Q9UK55 444 aa21.93■■□□□ 1.1
DDX55-204ENST00000536079 MYH13Q9UKX3 1938 aa21.93■■□□□ 1.1
DDX55-204ENST00000536079 SUGT1Q9Y2Z0 365 aa21.93■■□□□ 1.1
DDX55-204ENST00000536079 CLRN2A0PK11 232 aa21.92■■□□□ 1.1
DDX55-204ENST00000536079 LDHBP07195 334 aaKnown RBP21.92■■□□□ 1.1
DDX55-204ENST00000536079 IFIT2P09913 472 aaKnown RBP21.92■■□□□ 1.1
DDX55-204ENST00000536079 AAMPQ13685 434 aa21.92■■□□□ 1.1
DDX55-204ENST00000536079 CDC37L1Q7L3B6 337 aa21.92■■□□□ 1.1
DDX55-204ENST00000536079 KRT26Q7Z3Y9 468 aa21.92■■□□□ 1.1
DDX55-204ENST00000536079 DCPSQ96C86 337 aaKnown RBP21.92■■□□□ 1.1
DDX55-204ENST00000536079 ABCF2Q9UG63 623 aa21.92■■□□□ 1.1
DDX55-204ENST00000536079 CYP2E1P05181 493 aaPredicted RBP21.91■■□□□ 1.1
DDX55-204ENST00000536079 APLP1P51693 650 aa21.91■■□□□ 1.1
DDX55-204ENST00000536079 PRAMEF18Q5VWM3 479 aa21.91■■□□□ 1.1
DDX55-204ENST00000536079 CST9Q5W186 159 aa21.91■■□□□ 1.1
DDX55-204ENST00000536079 PIH1D3Q9NQM4 214 aaKnown RBP21.91■■□□□ 1.1
DDX55-204ENST00000536079 POLR2AP24928 1970 aaKnown RBP21.9■■□□□ 1.1
DDX55-204ENST00000536079 AKAP11Q9UKA4 1901 aa21.9■■□□□ 1.1
DDX55-204ENST00000536079 APOBEC3HQ6NTF7 200 aaKnown RBP21.9■■□□□ 1.1
DDX55-204ENST00000536079 OTUD7AQ8TE49 926 aaPredicted RBP21.9■■□□□ 1.1
DDX55-204ENST00000536079 TDRD3Q9H7E2 651 aaKnown RBP21.9■■□□□ 1.1
DDX55-204ENST00000536079 HDLBPQ00341 1268 aaKnown RBP21.89■■□□□ 1.09
DDX55-204ENST00000536079 TEKT1Q969V4 418 aa21.89■■□□□ 1.09
DDX55-204ENST00000536079 ZDHHC15Q96MV8 337 aa21.89■■□□□ 1.09
DDX55-204ENST00000536079 MRIQ9BWK5 157 aa21.89■■□□□ 1.09
DDX55-204ENST00000536079 ANTXR1Q9H6X2 564 aa21.89■■□□□ 1.09
DDX55-204ENST00000536079 ZNF70Q9UC06 446 aaPredicted RBP21.89■■□□□ 1.09
DDX55-204ENST00000536079 DAGLAQ9Y4D2 1042 aa21.89■■□□□ 1.09
DDX55-204ENST00000536079 PITPNM2Q9BZ72 1349 aa21.88■■□□□ 1.09
DDX55-204ENST00000536079 MECOMQ03112 1051 aa21.88■■□□□ 1.09
DDX55-204ENST00000536079 HHIPL2Q6UWX4 724 aa21.88■■□□□ 1.09
DDX55-204ENST00000536079 CACNB3P54284 484 aa21.87■■□□□ 1.09
DDX55-204ENST00000536079 SPDYE2Q495Y8 402 aa21.87■■□□□ 1.09
DDX55-204ENST00000536079 TSHZ3Q63HK5 1081 aa21.87■■□□□ 1.09
DDX55-204ENST00000536079 ERICH6Q7L0X2 663 aa21.87■■□□□ 1.09
DDX55-204ENST00000536079 SULF1Q8IWU6 871 aa21.87■■□□□ 1.09
DDX55-204ENST00000536079 ZGPATQ8N5A5 531 aaKnown RBP21.87■■□□□ 1.09
DDX55-204ENST00000536079 EDC3Q96F86 508 aaKnown RBP21.87■■□□□ 1.09
DDX55-204ENST00000536079 MAST3O60307 1309 aa21.86■■□□□ 1.09
DDX55-204ENST00000536079 ANKRD45Q5TZF3 282 aa21.86■■□□□ 1.09
DDX55-204ENST00000536079 NSUN4Q96CB9 384 aaKnown RBP21.86■■□□□ 1.09
DDX55-204ENST00000536079 CDCA5Q96FF9 252 aa21.86■■□□□ 1.09
DDX55-204ENST00000536079 RWDD1Q9H446 243 aaPredicted RBP21.86■■□□□ 1.09
DDX55-204ENST00000536079 ZNF408Q9H9D4 720 aa21.86■■□□□ 1.09
DDX55-204ENST00000536079 VEZTQ9HBM0 779 aa21.86■■□□□ 1.09
DDX55-204ENST00000536079 CELF2O95319 508 aaKnown RBP21.85■■□□□ 1.09
DDX55-204ENST00000536079 SPTY2D1Q68D10 685 aaPredicted RBP21.85■■□□□ 1.09
DDX55-204ENST00000536079 DZIP1Q86YF9 867 aaKnown RBP21.85■■□□□ 1.09
DDX55-204ENST00000536079 SMC5Q8IY18 1101 aa21.85■■□□□ 1.09
DDX55-204ENST00000536079 GCC1Q96CN9 775 aa21.85■■□□□ 1.09
DDX55-204ENST00000536079 BOLA2Q9H3K6 86 aa21.85■■□□□ 1.09
DDX55-204ENST00000536079 RAI14Q9P0K7 980 aa21.85■■□□□ 1.09
DDX55-204ENST00000536079 CEP350Q5VT06 3117 aa21.85■■□□□ 1.09
DDX55-204ENST00000536079 GAKO14976 1311 aa21.84■■□□□ 1.09
DDX55-204ENST00000536079 TMEM88BA6NKF7 163 aa21.84■■□□□ 1.09
DDX55-204ENST00000536079 ATP5JP18859 108 aa21.84■■□□□ 1.09
DDX55-204ENST00000536079 CDC42EP5Q6NZY7 148 aa21.84■■□□□ 1.09
DDX55-204ENST00000536079 CDAN1Q8IWY9 1227 aa21.84■■□□□ 1.09
DDX55-204ENST00000536079 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.84■■□□□ 1.09
DDX55-204ENST00000536079 LRP2BPQ9P2M1 347 aa21.84■■□□□ 1.09
DDX55-204ENST00000536079 TCP10L2B9ZVM9 353 aa21.83■■□□□ 1.09
DDX55-204ENST00000536079 B4GALNT3Q6L9W6 998 aa21.83■■□□□ 1.09
DDX55-204ENST00000536079 ADGRA1Q86SQ6 560 aa21.83■■□□□ 1.09
DDX55-204ENST00000536079 APOBEC3FQ8IUX4 373 aaKnown RBP21.83■■□□□ 1.09
DDX55-204ENST00000536079 DNAJC2Q99543 621 aaKnown RBP21.83■■□□□ 1.09
DDX55-204ENST00000536079 DEFB129Q9H1M3 183 aa21.83■■□□□ 1.09
DDX55-204ENST00000536079 CREBZFQ9NS37 354 aa21.83■■□□□ 1.09
DDX55-204ENST00000536079 SALL3Q9BXA9 1300 aa21.82■■□□□ 1.08
DDX55-204ENST00000536079 MYO1BO43795 1136 aa21.82■■□□□ 1.08
DDX55-204ENST00000536079 FAM163AQ96GL9 167 aaPredicted RBP21.82■■□□□ 1.08
DDX55-204ENST00000536079 MROH7-TTC4A0A0A0MT08 1334 aa21.81■■□□□ 1.08
DDX55-204ENST00000536079 MYO5AQ9Y4I1 1855 aaKnown RBP21.81■■□□□ 1.08
DDX55-204ENST00000536079 GOLIM4O00461 696 aa21.81■■□□□ 1.08
DDX55-204ENST00000536079 RASA3Q14644 834 aa21.81■■□□□ 1.08
DDX55-204ENST00000536079 DNAJC5GQ8N7S2 189 aa21.81■■□□□ 1.08
DDX55-204ENST00000536079 HAUS7Q99871 368 aa21.81■■□□□ 1.08
DDX55-204ENST00000536079 ECHDC1Q9NTX5 307 aa21.81■■□□□ 1.08
DDX55-204ENST00000536079 USP40Q9NVE5 1235 aa21.81■■□□□ 1.08
DDX55-204ENST00000536079 CNTNAP1P78357 1384 aa21.81■■□□□ 1.08
DDX55-204ENST00000536079 BTDP43251 543 aa21.8■■□□□ 1.08
DDX55-204ENST00000536079 NFIAQ12857 509 aa21.8■■□□□ 1.08
DDX55-204ENST00000536079 MOB2Q70IA6 237 aa21.8■■□□□ 1.08
DDX55-204ENST00000536079 FZD1Q9UP38 647 aa21.8■■□□□ 1.08
DDX55-204ENST00000536079 ECM29Q5VYK3 1845 aa21.79■■□□□ 1.08
DDX55-204ENST00000536079 GPR75-ASB3A0A0A6YYF3 556 aa21.79■■□□□ 1.08
DDX55-204ENST00000536079 IDH1O75874 414 aaKnown RBP21.79■■□□□ 1.08
DDX55-204ENST00000536079 CHGBP05060 677 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms